RNA–Protein interactions for RNA: ENST00000291552.8

U2AF1-201, Transcript of U2 small nuclear RNA auxiliary factor 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene U2AF1, Length 962 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1-201ENST00000291552 ZNF850A8MQ14 1090 aa20.79■□□□□ 0.92
U2AF1-201ENST00000291552 TFF1P04155 84 aa20.79■□□□□ 0.92
U2AF1-201ENST00000291552 TMEM236Q5W0B7 351 aa20.79■□□□□ 0.92
U2AF1-201ENST00000291552 OR5P3Q8WZ94 311 aa20.79■□□□□ 0.92
U2AF1-201ENST00000291552 RPL3LQ92901 407 aaKnown RBP20.79■□□□□ 0.92
U2AF1-201ENST00000291552 FAM71F1Q96KD3 344 aaPredicted RBP20.79■□□□□ 0.92
U2AF1-201ENST00000291552 MICU1Q9BPX6 476 aa20.79■□□□□ 0.92
U2AF1-201ENST00000291552 KIF17Q9P2E2 1029 aa20.79■□□□□ 0.92
U2AF1-201ENST00000291552 LRP12Q9Y561 859 aa20.79■□□□□ 0.92
U2AF1-201ENST00000291552 MPC1Q9Y5U8 109 aa20.79■□□□□ 0.92
U2AF1-201ENST00000291552 GNGT2O14610 69 aa20.78■□□□□ 0.92
U2AF1-201ENST00000291552 CST4P01036 141 aa20.78■□□□□ 0.92
U2AF1-201ENST00000291552 TGM4P49221 684 aa20.78■□□□□ 0.92
U2AF1-201ENST00000291552 HCCSP53701 268 aa20.78■□□□□ 0.92
U2AF1-201ENST00000291552 RAG2P55895 527 aa20.78■□□□□ 0.92
U2AF1-201ENST00000291552 IL5RAQ01344 420 aa20.78■□□□□ 0.92
U2AF1-201ENST00000291552 SRSF4Q08170 494 aaKnown RBP20.78■□□□□ 0.92
U2AF1-201ENST00000291552 VMO1Q7Z5L0 202 aa20.78■□□□□ 0.92
U2AF1-201ENST00000291552 PDZD9Q8IXQ8 264 aa20.78■□□□□ 0.92
U2AF1-201ENST00000291552 PIP4P2Q8N4L2 257 aa20.78■□□□□ 0.92
U2AF1-201ENST00000291552 WFDC12Q8WWY7 111 aa20.78■□□□□ 0.92
U2AF1-201ENST00000291552 RAB3IPQ96QF0 476 aaPredicted RBP20.78■□□□□ 0.92
U2AF1-201ENST00000291552 PKP2Q99959 881 aa20.78■□□□□ 0.92
U2AF1-201ENST00000291552 RTL8AQ9BWD3 113 aa20.78■□□□□ 0.92
U2AF1-201ENST00000291552 CNTD2Q9H8S5 307 aa20.78■□□□□ 0.92
U2AF1-201ENST00000291552 SLC25A19Q9HC21 320 aa20.78■□□□□ 0.92
U2AF1-201ENST00000291552 KPTNQ9Y664 436 aa20.78■□□□□ 0.92
U2AF1-201ENST00000291552 ANXA2P2A6NMY6 339 aa20.77■□□□□ 0.92
U2AF1-201ENST00000291552 PRR32B1ATL7 298 aa20.77■□□□□ 0.92
U2AF1-201ENST00000291552 KCNAB3O43448 404 aa20.77■□□□□ 0.92
U2AF1-201ENST00000291552 E2F6O75461 281 aa20.77■□□□□ 0.92
U2AF1-201ENST00000291552 HMGN1P05114 100 aa20.77■□□□□ 0.92
U2AF1-201ENST00000291552 ALOX5APP20292 161 aa20.77■□□□□ 0.92
U2AF1-201ENST00000291552 DCTDP32321 178 aa20.77■□□□□ 0.92
U2AF1-201ENST00000291552 GMFBP60983 142 aa20.77■□□□□ 0.92
U2AF1-201ENST00000291552 CDONQ4KMG0 1287 aa20.77■□□□□ 0.92
U2AF1-201ENST00000291552 ATPAF1Q5TC12 328 aaPredicted RBP20.77■□□□□ 0.92
U2AF1-201ENST00000291552 HIST2H2ABQ8IUE6 130 aaPredicted RBP20.77■□□□□ 0.92
U2AF1-201ENST00000291552 OR5T2Q8NGG2 359 aa20.77■□□□□ 0.92
U2AF1-201ENST00000291552 OR10Z1Q8NGY1 313 aa20.77■□□□□ 0.92
U2AF1-201ENST00000291552 C12orf43Q96C57 262 aaKnown RBP20.77■□□□□ 0.92
U2AF1-201ENST00000291552 HAO2Q9NYQ3 351 aa20.77■□□□□ 0.92
U2AF1-201ENST00000291552 POMT1Q9Y6A1 747 aa20.77■□□□□ 0.92
U2AF1-201ENST00000291552 CCDC182A6NF36 153 aa20.76■□□□□ 0.91
U2AF1-201ENST00000291552 FKBP6O75344 327 aa20.76■□□□□ 0.91
U2AF1-201ENST00000291552 NDUFA7O95182 113 aa20.76■□□□□ 0.91
U2AF1-201ENST00000291552 IGHV4-59P01825 116 aa20.76■□□□□ 0.91
U2AF1-201ENST00000291552 DLX1P56177 255 aa20.76■□□□□ 0.91
U2AF1-201ENST00000291552 PRB3Q04118 309 aaPredicted RBP20.76■□□□□ 0.91
U2AF1-201ENST00000291552 IKZF1Q13422 519 aa20.76■□□□□ 0.91
U2AF1-201ENST00000291552 FAM76BQ5HYJ3 339 aa20.76■□□□□ 0.91
U2AF1-201ENST00000291552 SLC35D3Q5M8T2 416 aa20.76■□□□□ 0.91
U2AF1-201ENST00000291552 LDLRAD3Q86YD5 345 aa20.76■□□□□ 0.91
U2AF1-201ENST00000291552 KIR3DL3Q8N743 410 aa20.76■□□□□ 0.91
U2AF1-201ENST00000291552 SCCPDHQ8NBX0 429 aa20.76■□□□□ 0.91
U2AF1-201ENST00000291552 SSMEM1Q8WWF3 244 aa20.76■□□□□ 0.91
U2AF1-201ENST00000291552 GAFA1Q96PS6 74 aa20.76■□□□□ 0.91
U2AF1-201ENST00000291552 SNTG1Q9NSN8 517 aa20.76■□□□□ 0.91
U2AF1-201ENST00000291552 NOTCH1P46531 2555 aa20.75■□□□□ 0.91
U2AF1-201ENST00000291552 TCRBV3S1A0A5B6 114 aa20.75■□□□□ 0.91
U2AF1-201ENST00000291552 TMEM210A6NLX4 147 aa20.75■□□□□ 0.91
U2AF1-201ENST00000291552 CBX1P83916 185 aa20.75■□□□□ 0.91
U2AF1-201ENST00000291552 APOFQ13790 326 aa20.75■□□□□ 0.91
U2AF1-201ENST00000291552 SNCBQ16143 134 aa20.75■□□□□ 0.91
U2AF1-201ENST00000291552 SLC36A1Q7Z2H8 476 aa20.75■□□□□ 0.91
U2AF1-201ENST00000291552 SPATA24Q86W54 205 aa20.75■□□□□ 0.91
U2AF1-201ENST00000291552 FTMTQ8N4E7 242 aa20.75■□□□□ 0.91
U2AF1-201ENST00000291552 PIGCQ92535 297 aa20.75■□□□□ 0.91
U2AF1-201ENST00000291552 DCTN5Q9BTE1 182 aa20.75■□□□□ 0.91
U2AF1-201ENST00000291552 SEMA6AQ9H2E6 1030 aa20.75■□□□□ 0.91
U2AF1-201ENST00000291552 NIPAL2Q9H841 368 aa20.75■□□□□ 0.91
U2AF1-201ENST00000291552 ZNF556Q9HAH1 456 aa20.75■□□□□ 0.91
U2AF1-201ENST00000291552 FAM206AQ9NX38 181 aa20.75■□□□□ 0.91
U2AF1-201ENST00000291552 ONECUT1Q9UBC0 465 aa20.75■□□□□ 0.91
U2AF1-201ENST00000291552 AKR7A2O43488 359 aa20.74■□□□□ 0.91
U2AF1-201ENST00000291552 ANXA8P13928 327 aa20.74■□□□□ 0.91
U2AF1-201ENST00000291552 RPS7P62081 194 aaKnown RBP20.74■□□□□ 0.91
U2AF1-201ENST00000291552 FLOT2Q14254 428 aa20.74■□□□□ 0.91
U2AF1-201ENST00000291552 TREML4Q6UXN2 200 aa20.74■□□□□ 0.91
U2AF1-201ENST00000291552 KRT74Q7RTS7 529 aa20.74■□□□□ 0.91
U2AF1-201ENST00000291552 TRPM8Q7Z2W7 1104 aa20.74■□□□□ 0.91
U2AF1-201ENST00000291552 Q8N7P7 452 aa20.74■□□□□ 0.91
U2AF1-201ENST00000291552 PAPD5Q8NDF8 572 aaKnown RBP20.74■□□□□ 0.91
U2AF1-201ENST00000291552 OR4F5Q8NH21 305 aa20.74■□□□□ 0.91
U2AF1-201ENST00000291552 ANGPTL6Q8NI99 470 aa20.74■□□□□ 0.91
U2AF1-201ENST00000291552 C8orf46Q8TAG6 207 aa20.74■□□□□ 0.91
U2AF1-201ENST00000291552 SLC7A6OSQ96CW6 309 aaPredicted RBP20.74■□□□□ 0.91
U2AF1-201ENST00000291552 RNF170Q96K19 258 aa20.74■□□□□ 0.91
U2AF1-201ENST00000291552 ABCB9Q9NP78 766 aa20.74■□□□□ 0.91
U2AF1-201ENST00000291552 SIRT7Q9NRC8 400 aa20.74■□□□□ 0.91
U2AF1-201ENST00000291552 DNAJB9Q9UBS3 223 aa20.74■□□□□ 0.91
U2AF1-201ENST00000291552 LAMP5Q9UJQ1 280 aa20.74■□□□□ 0.91
U2AF1-201ENST00000291552 PSMD9O00233 223 aa20.73■□□□□ 0.91
U2AF1-201ENST00000291552 NDUFB3O43676 98 aa20.73■□□□□ 0.91
U2AF1-201ENST00000291552 IER3P46695 156 aa20.73■□□□□ 0.91
U2AF1-201ENST00000291552 ZNF788Q6ZQV5 615 aa20.73■□□□□ 0.91
U2AF1-201ENST00000291552 KRT77Q7Z794 578 aa20.73■□□□□ 0.91
U2AF1-201ENST00000291552 ZDHHC23Q8IYP9 409 aa20.73■□□□□ 0.91
U2AF1-201ENST00000291552 YIPF3Q9GZM5 350 aa20.73■□□□□ 0.91
U2AF1-201ENST00000291552 BEX1Q9HBH7 125 aa20.73■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms