RNA–Protein interactions for RNA: ENST00000266546.10

CLSTN3-201, Transcript of calsyntenin 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CLSTN3, Length 4,185 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-201ENST00000266546 OR51A4Q8NGJ6 313 aa10.31□□□□□ -0.76
CLSTN3-201ENST00000266546 TSLPQ969D9 159 aa10.31□□□□□ -0.76
CLSTN3-201ENST00000266546 CPNE4Q96A23 557 aaPredicted RBP10.31□□□□□ -0.76
CLSTN3-201ENST00000266546 OR2A7Q96R45 310 aa10.31□□□□□ -0.76
CLSTN3-201ENST00000266546 ZNF2Q9BSG1 426 aaPredicted RBP10.31□□□□□ -0.76
CLSTN3-201ENST00000266546 CHRNA9Q9UGM1 479 aa10.31□□□□□ -0.76
CLSTN3-201ENST00000266546 DKKL1Q9UK85 242 aa10.31□□□□□ -0.76
CLSTN3-201ENST00000266546 PADI1Q9ULC6 663 aa10.31□□□□□ -0.76
CLSTN3-201ENST00000266546 NSG2Q9Y328 171 aa10.31□□□□□ -0.76
CLSTN3-201ENST00000266546 TMEM229AB2RXF0 380 aa10.31□□□□□ -0.76
CLSTN3-201ENST00000266546 DLL1O00548 723 aa10.31□□□□□ -0.76
CLSTN3-201ENST00000266546 CNOT4O95628 575 aaKnown RBP10.31□□□□□ -0.76
CLSTN3-201ENST00000266546 FOLR1P15328 257 aa10.31□□□□□ -0.76
CLSTN3-201ENST00000266546 RAB32Q13637 225 aa10.31□□□□□ -0.76
CLSTN3-201ENST00000266546 RAET1LQ5VY80 246 aa10.31□□□□□ -0.76
CLSTN3-201ENST00000266546 CPEB2Q7Z5Q1 589 aaKnown RBP10.31□□□□□ -0.76
CLSTN3-201ENST00000266546 OR10AC1Q8NH08 325 aa10.31□□□□□ -0.76
CLSTN3-201ENST00000266546 RXFP4Q8TDU9 374 aa10.31□□□□□ -0.76
CLSTN3-201ENST00000266546 ANKRD9Q96BM1 317 aaPredicted RBP10.31□□□□□ -0.76
CLSTN3-201ENST00000266546 SLAMF6Q96DU3 332 aa10.31□□□□□ -0.76
CLSTN3-201ENST00000266546 PRSS27Q9BQR3 290 aa10.31□□□□□ -0.76
CLSTN3-201ENST00000266546 PIGQQ9BRB3 760 aa10.31□□□□□ -0.76
CLSTN3-201ENST00000266546 IGHV3-20A0A0C4DH32 117 aa10.3□□□□□ -0.76
CLSTN3-201ENST00000266546 CENPVL1A0A0U1RR11 272 aa10.3□□□□□ -0.76
CLSTN3-201ENST00000266546 OR4C45A6NMZ5 311 aa10.3□□□□□ -0.76
CLSTN3-201ENST00000266546 A8MXK9 166 aa10.3□□□□□ -0.76
CLSTN3-201ENST00000266546 SULT2B1O00204 365 aa10.3□□□□□ -0.76
CLSTN3-201ENST00000266546 EIF4E2O60573 245 aaKnown RBP10.3□□□□□ -0.76
CLSTN3-201ENST00000266546 DDAH2O95865 285 aa10.3□□□□□ -0.76
CLSTN3-201ENST00000266546 GPANK1O95872 356 aa10.3□□□□□ -0.76
CLSTN3-201ENST00000266546 THBS2P35442 1172 aa10.3□□□□□ -0.76
CLSTN3-201ENST00000266546 GABREP78334 506 aa10.3□□□□□ -0.76
CLSTN3-201ENST00000266546 PRSS54Q6PEW0 395 aa10.3□□□□□ -0.76
CLSTN3-201ENST00000266546 GRINAQ7Z429 371 aa10.3□□□□□ -0.76
CLSTN3-201ENST00000266546 C1orf87Q8N0U7 546 aa10.3□□□□□ -0.76
CLSTN3-201ENST00000266546 SEH1LQ96EE3 360 aa10.3□□□□□ -0.76
CLSTN3-201ENST00000266546 MS4A3Q96HJ5 214 aa10.3□□□□□ -0.76
CLSTN3-201ENST00000266546 ZNF426Q9BUY5 554 aa10.3□□□□□ -0.76
CLSTN3-201ENST00000266546 EMC6Q9BV81 110 aa10.3□□□□□ -0.76
CLSTN3-201ENST00000266546 TXNIPQ9H3M7 391 aa10.3□□□□□ -0.76
CLSTN3-201ENST00000266546 LRP12Q9Y561 859 aa10.3□□□□□ -0.76
CLSTN3-201ENST00000266546 KCNMB2Q9Y691 235 aa10.3□□□□□ -0.76
CLSTN3-201ENST00000266546 CACNA1AO00555 2505 aa10.3□□□□□ -0.76
CLSTN3-201ENST00000266546 FRG2CA6NGY1 282 aa10.3□□□□□ -0.76
CLSTN3-201ENST00000266546 GPR137BO60478 399 aa10.3□□□□□ -0.76
CLSTN3-201ENST00000266546 CSNK1A1P48729 337 aa10.3□□□□□ -0.76
CLSTN3-201ENST00000266546 EFNA3P52797 238 aa10.3□□□□□ -0.76
CLSTN3-201ENST00000266546 EFNB2P52799 333 aa10.3□□□□□ -0.76
CLSTN3-201ENST00000266546 NANOS3P60323 173 aaKnown RBP10.3□□□□□ -0.76
CLSTN3-201ENST00000266546 SLC25A45Q8N413 288 aa10.3□□□□□ -0.76
CLSTN3-201ENST00000266546 COMMD1Q8N668 190 aa10.3□□□□□ -0.76
CLSTN3-201ENST00000266546 GVQW1Q8N7I0 195 aa10.3□□□□□ -0.76
CLSTN3-201ENST00000266546 ISOC2Q96AB3 205 aa10.3□□□□□ -0.76
CLSTN3-201ENST00000266546 KTI12Q96EK9 354 aaPredicted RBP10.3□□□□□ -0.76
CLSTN3-201ENST00000266546 RAB18Q9NP72 206 aa10.3□□□□□ -0.76
CLSTN3-201ENST00000266546 B4GALT7Q9UBV7 327 aa10.3□□□□□ -0.76
CLSTN3-201ENST00000266546 LPAR3Q9UBY5 353 aa10.3□□□□□ -0.76
CLSTN3-201ENST00000266546 ZMIZ1Q9ULJ6 1067 aa10.3□□□□□ -0.76
CLSTN3-201ENST00000266546 PCDHGA1Q9Y5H4 931 aa10.3□□□□□ -0.76
CLSTN3-201ENST00000266546 MMP24Q9Y5R2 645 aa10.3□□□□□ -0.76
CLSTN3-201ENST00000266546 STMND1H3BQB6 276 aa10.3□□□□□ -0.76
CLSTN3-201ENST00000266546 PTP4A3O75365 173 aa10.3□□□□□ -0.76
CLSTN3-201ENST00000266546 OR7C1O76099 320 aaPredicted RBP10.3□□□□□ -0.76
CLSTN3-201ENST00000266546 TK1P04183 234 aa10.3□□□□□ -0.76
CLSTN3-201ENST00000266546 MYF5P13349 255 aa10.3□□□□□ -0.76
CLSTN3-201ENST00000266546 RAB11AP62491 216 aa10.3□□□□□ -0.76
CLSTN3-201ENST00000266546 CNN3Q15417 329 aaKnown RBP10.3□□□□□ -0.76
CLSTN3-201ENST00000266546 CLEC9AQ6UXN8 241 aa10.3□□□□□ -0.76
CLSTN3-201ENST00000266546 SECTM1Q8WVN6 248 aa10.3□□□□□ -0.76
CLSTN3-201ENST00000266546 RBMXL1Q96E39 390 aaKnown RBP10.3□□□□□ -0.76
CLSTN3-201ENST00000266546 RSRP1Q9BUV0 290 aa10.3□□□□□ -0.76
CLSTN3-201ENST00000266546 ZCCHC4Q9H5U6 513 aa10.3□□□□□ -0.76
CLSTN3-201ENST00000266546 ASH2LQ9UBL3 628 aa10.3□□□□□ -0.76
CLSTN3-201ENST00000266546 CTSFQ9UBX1 484 aa10.3□□□□□ -0.76
CLSTN3-201ENST00000266546 ABCD4O14678 606 aa10.29□□□□□ -0.76
CLSTN3-201ENST00000266546 FOXS1O43638 330 aa10.29□□□□□ -0.76
CLSTN3-201ENST00000266546 ADAP1O75689 374 aa10.29□□□□□ -0.76
CLSTN3-201ENST00000266546 CYC1P08574 325 aa10.29□□□□□ -0.76
CLSTN3-201ENST00000266546 BTCP35070 178 aa10.29□□□□□ -0.76
CLSTN3-201ENST00000266546 SRSF5Q13243 272 aaKnown RBP10.29□□□□□ -0.76
CLSTN3-201ENST00000266546 TOMM34Q15785 309 aaPredicted RBP10.29□□□□□ -0.76
CLSTN3-201ENST00000266546 EXT1Q16394 746 aa10.29□□□□□ -0.76
CLSTN3-201ENST00000266546 RPL7L1Q6DKI1 246 aaKnown RBP10.29□□□□□ -0.76
CLSTN3-201ENST00000266546 H1FNTQ75WM6 255 aaPredicted RBP10.29□□□□□ -0.76
CLSTN3-201ENST00000266546 NR2C2APQ86WQ0 139 aa10.29□□□□□ -0.76
CLSTN3-201ENST00000266546 OR5L1Q8NGL2 311 aa10.29□□□□□ -0.76
CLSTN3-201ENST00000266546 PIGTQ969N2 578 aa10.29□□□□□ -0.76
CLSTN3-201ENST00000266546 NAA11Q9BSU3 229 aaPredicted RBP10.29□□□□□ -0.76
CLSTN3-201ENST00000266546 AK3Q9UIJ7 227 aa10.29□□□□□ -0.76
CLSTN3-201ENST00000266546 XRCC2O43543 280 aa10.29□□□□□ -0.76
CLSTN3-201ENST00000266546 TBX6O95947 436 aaPredicted RBP10.29□□□□□ -0.76
CLSTN3-201ENST00000266546 CT62P0C5K7 136 aa10.29□□□□□ -0.76
CLSTN3-201ENST00000266546 LAP3P28838 519 aa10.29□□□□□ -0.76
CLSTN3-201ENST00000266546 PTGFRP43088 359 aa10.29□□□□□ -0.76
CLSTN3-201ENST00000266546 SRPXP78539 464 aa10.29□□□□□ -0.76
CLSTN3-201ENST00000266546 FLVCR1-AS1Q8TAF5 88 aa10.29□□□□□ -0.76
CLSTN3-201ENST00000266546 GPX8Q8TED1 209 aa10.29□□□□□ -0.76
CLSTN3-201ENST00000266546 APOBEC4Q8WW27 367 aaKnown RBP10.29□□□□□ -0.76
CLSTN3-201ENST00000266546 PLXNB3Q9ULL4 1909 aa10.29□□□□□ -0.76
CLSTN3-201ENST00000266546 TDRD6O60522 2096 aaKnown RBP10.29□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms