RNA–Protein interactions for RNA: ENST00000231130.3

PCDHB3-201, Transcript of protocadherin beta 3, humanhuman

APPRIS P1 BASIC

Gene PCDHB3, Length 3,355 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB3-201ENST00000231130 CAPNS2Q96L46 248 aa12.59□□□□□ -0.39
PCDHB3-201ENST00000231130 WDR92Q96MX6 357 aa12.59□□□□□ -0.39
PCDHB3-201ENST00000231130 PHF3Q92576 2039 aaKnown RBP12.59□□□□□ -0.39
PCDHB3-201ENST00000231130 ASXL3Q9C0F0 2248 aa12.59□□□□□ -0.39
PCDHB3-201ENST00000231130 C17orf105B2RV13 164 aa12.59□□□□□ -0.39
PCDHB3-201ENST00000231130 H0YIG0 161 aa12.59□□□□□ -0.39
PCDHB3-201ENST00000231130 CLDN6P56747 220 aa12.59□□□□□ -0.39
PCDHB3-201ENST00000231130 INSM1Q01101 510 aaPredicted RBP12.59□□□□□ -0.39
PCDHB3-201ENST00000231130 BTNL8Q6UX41 500 aa12.59□□□□□ -0.39
PCDHB3-201ENST00000231130 HEPN1Q6WQI6 88 aa12.59□□□□□ -0.39
PCDHB3-201ENST00000231130 ZNF574Q6ZN55 896 aaPredicted RBP12.59□□□□□ -0.39
PCDHB3-201ENST00000231130 LRRC75AQ8NAA5 344 aa12.59□□□□□ -0.39
PCDHB3-201ENST00000231130 APCDD1LQ8NCL9 501 aa12.59□□□□□ -0.39
PCDHB3-201ENST00000231130 RNF128Q8TEB7 428 aa12.59□□□□□ -0.39
PCDHB3-201ENST00000231130 NTNG2Q96CW9 530 aa12.59□□□□□ -0.39
PCDHB3-201ENST00000231130 ZNF700Q9H0M5 742 aa12.59□□□□□ -0.39
PCDHB3-201ENST00000231130 SLCO1B1Q9Y6L6 691 aa12.59□□□□□ -0.39
PCDHB3-201ENST00000231130 MARCH11A6NNE9 402 aa12.58□□□□□ -0.39
PCDHB3-201ENST00000231130 RAB27BO00194 218 aa12.58□□□□□ -0.39
PCDHB3-201ENST00000231130 ADH1BP00325 375 aa12.58□□□□□ -0.39
PCDHB3-201ENST00000231130 GPM6BQ13491 265 aa12.58□□□□□ -0.39
PCDHB3-201ENST00000231130 DMRTA1Q5VZB9 504 aa12.58□□□□□ -0.39
PCDHB3-201ENST00000231130 RPP25Q9BUL9 199 aaKnown RBP12.58□□□□□ -0.39
PCDHB3-201ENST00000231130 FOXQ1Q9C009 403 aa12.58□□□□□ -0.39
PCDHB3-201ENST00000231130 TUBA4BQ9H853 241 aa12.58□□□□□ -0.39
PCDHB3-201ENST00000231130 SLC2A4RGQ9NR83 387 aa12.58□□□□□ -0.39
PCDHB3-201ENST00000231130 K7EPK0 472 aa12.58□□□□□ -0.4
PCDHB3-201ENST00000231130 EMP2P54851 167 aa12.58□□□□□ -0.4
PCDHB3-201ENST00000231130 RPUSD3Q6P087 351 aaKnown RBP12.58□□□□□ -0.4
PCDHB3-201ENST00000231130 ANGPTL5Q86XS5 388 aa12.58□□□□□ -0.4
PCDHB3-201ENST00000231130 HIST3H2BBQ8N257 126 aa12.58□□□□□ -0.4
PCDHB3-201ENST00000231130 FAM71E2Q8N5Q1 922 aa12.58□□□□□ -0.4
PCDHB3-201ENST00000231130 FAM213BQ8TBF2 198 aa12.58□□□□□ -0.4
PCDHB3-201ENST00000231130 OR10C1Q96KK4 312 aa12.58□□□□□ -0.4
PCDHB3-201ENST00000231130 LMF2Q9BU23 707 aaKnown RBP12.58□□□□□ -0.4
PCDHB3-201ENST00000231130 PLA2G2FQ9BZM2 168 aa12.58□□□□□ -0.4
PCDHB3-201ENST00000231130 OR52A1Q9UKL2 312 aa12.58□□□□□ -0.4
PCDHB3-201ENST00000231130 CABIN1Q9Y6J0 2220 aa12.58□□□□□ -0.4
PCDHB3-201ENST00000231130 PRSS37A4D1T9 235 aa12.58□□□□□ -0.4
PCDHB3-201ENST00000231130 UTS2O95399 124 aa12.58□□□□□ -0.4
PCDHB3-201ENST00000231130 CXCL1P09341 107 aa12.58□□□□□ -0.4
PCDHB3-201ENST00000231130 FCGR2CP31995 323 aa12.58□□□□□ -0.4
PCDHB3-201ENST00000231130 RPL29P47914 159 aaKnown RBP12.58□□□□□ -0.4
PCDHB3-201ENST00000231130 SULT1A2P50226 295 aa12.58□□□□□ -0.4
PCDHB3-201ENST00000231130 ZNF664Q8N3J9 261 aa12.58□□□□□ -0.4
PCDHB3-201ENST00000231130 GPER1Q99527 375 aa12.58□□□□□ -0.4
PCDHB3-201ENST00000231130 EMC6Q9BV81 110 aa12.58□□□□□ -0.4
PCDHB3-201ENST00000231130 SLC35B3Q9H1N7 401 aa12.58□□□□□ -0.4
PCDHB3-201ENST00000231130 CYP8B1Q9UNU6 501 aa12.58□□□□□ -0.4
PCDHB3-201ENST00000231130 ZNF205O95201 554 aa12.57□□□□□ -0.4
PCDHB3-201ENST00000231130 NPSP0C0P6 89 aa12.57□□□□□ -0.4
PCDHB3-201ENST00000231130 TRGC1P0CF51 173 aa12.57□□□□□ -0.4
PCDHB3-201ENST00000231130 CCL5P13501 91 aa12.57□□□□□ -0.4
PCDHB3-201ENST00000231130 COL13A1Q5TAT6 717 aaPredicted RBP12.57□□□□□ -0.4
PCDHB3-201ENST00000231130 P4HA3Q7Z4N8 544 aa12.57□□□□□ -0.4
PCDHB3-201ENST00000231130 CARFQ8N187 725 aa12.57□□□□□ -0.4
PCDHB3-201ENST00000231130 C17orf78Q8N4C9 275 aa12.57□□□□□ -0.4
PCDHB3-201ENST00000231130 NUDT22Q9BRQ3 303 aa12.57□□□□□ -0.4
PCDHB3-201ENST00000231130 ELL3Q9HB65 397 aaPredicted RBP12.57□□□□□ -0.4
PCDHB3-201ENST00000231130 LINC00271P0C7V0 271 aa12.57□□□□□ -0.4
PCDHB3-201ENST00000231130 IL11P20809 199 aa12.57□□□□□ -0.4
PCDHB3-201ENST00000231130 GLRA1P23415 457 aa12.57□□□□□ -0.4
PCDHB3-201ENST00000231130 CD200P41217 278 aa12.57□□□□□ -0.4
PCDHB3-201ENST00000231130 MYO7BQ6PIF6 2116 aa12.57□□□□□ -0.4
PCDHB3-201ENST00000231130 ZNF705AQ6ZN79 300 aaPredicted RBP12.57□□□□□ -0.4
PCDHB3-201ENST00000231130 SLC37A2Q8TED4 501 aa12.57□□□□□ -0.4
PCDHB3-201ENST00000231130 GPX7Q96SL4 187 aaPredicted RBP12.57□□□□□ -0.4
PCDHB3-201ENST00000231130 NDUFAF3Q9BU61 184 aa12.57□□□□□ -0.4
PCDHB3-201ENST00000231130 PBDC1Q9BVG4 233 aa12.57□□□□□ -0.4
PCDHB3-201ENST00000231130 PARP11Q9NR21 331 aa12.57□□□□□ -0.4
PCDHB3-201ENST00000231130 FBXL17Q9UF56 701 aa12.57□□□□□ -0.4
PCDHB3-201ENST00000231130 A0A0A6YYH2 397 aa12.56□□□□□ -0.4
PCDHB3-201ENST00000231130 A6NJ64 397 aa12.56□□□□□ -0.4
PCDHB3-201ENST00000231130 B4DGG1 531 aa12.56□□□□□ -0.4
PCDHB3-201ENST00000231130 ATXN7O15265 892 aaPredicted RBP12.56□□□□□ -0.4
PCDHB3-201ENST00000231130 AHSA1O95433 338 aa12.56□□□□□ -0.4
PCDHB3-201ENST00000231130 DUS4LO95620 317 aaKnown RBP12.56□□□□□ -0.4
PCDHB3-201ENST00000231130 PTBP3O95758 552 aaKnown RBP12.56□□□□□ -0.4
PCDHB3-201ENST00000231130 H2BFMP0C1H6 154 aa12.56□□□□□ -0.4
PCDHB3-201ENST00000231130 TUBG1P23258 451 aa12.56□□□□□ -0.4
PCDHB3-201ENST00000231130 OR3A2P47893 321 aa12.56□□□□□ -0.4
PCDHB3-201ENST00000231130 RAB1AP62820 205 aa12.56□□□□□ -0.4
PCDHB3-201ENST00000231130 SLC10A1Q14973 349 aa12.56□□□□□ -0.4
PCDHB3-201ENST00000231130 CDCP2Q5VXM1 449 aa12.56□□□□□ -0.4
PCDHB3-201ENST00000231130 PRSS54Q6PEW0 395 aa12.56□□□□□ -0.4
PCDHB3-201ENST00000231130 PNLDC1Q8NA58 520 aaKnown RBP12.56□□□□□ -0.4
PCDHB3-201ENST00000231130 TERB2Q8NHR7 220 aa12.56□□□□□ -0.4
PCDHB3-201ENST00000231130 Q8WTZ3 238 aa12.56□□□□□ -0.4
PCDHB3-201ENST00000231130 MED29Q9NX70 200 aa12.56□□□□□ -0.4
PCDHB3-201ENST00000231130 A0A0J9YY10 115 aa12.56□□□□□ -0.4
PCDHB3-201ENST00000231130 KLK2P20151 261 aa12.56□□□□□ -0.4
PCDHB3-201ENST00000231130 RAB4AP20338 218 aa12.56□□□□□ -0.4
PCDHB3-201ENST00000231130 PMELP40967 661 aa12.56□□□□□ -0.4
PCDHB3-201ENST00000231130 FOXL2P58012 376 aa12.56□□□□□ -0.4
PCDHB3-201ENST00000231130 UNC119Q13432 240 aa12.56□□□□□ -0.4
PCDHB3-201ENST00000231130 HAGHQ16775 308 aa12.56□□□□□ -0.4
PCDHB3-201ENST00000231130 ZNF260Q3ZCT1 412 aa12.56□□□□□ -0.4
PCDHB3-201ENST00000231130 FAM166AQ6J272 317 aa12.56□□□□□ -0.4
PCDHB3-201ENST00000231130 CLEC18BQ6UXF7 455 aa12.56□□□□□ -0.4
PCDHB3-201ENST00000231130 CDC6Q99741 560 aa12.56□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms