RNA–Protein interactions for RNA: ENST00000229829.6

HLA-DOA-201, Transcript of major histocompatibility complex, class II, DO alpha, humanhuman

APPRIS P1 BASIC

Gene HLA-DOA, Length 3,489 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DOA-201ENST00000229829 DNASE1L1P49184 302 aa8.35□□□□□ -1.07
HLA-DOA-201ENST00000229829 CAV2P51636 162 aa8.35□□□□□ -1.07
HLA-DOA-201ENST00000229829 C1orf140Q5VVS0 124 aa8.35□□□□□ -1.07
HLA-DOA-201ENST00000229829 KCTD18Q6PI47 426 aaPredicted RBP8.35□□□□□ -1.07
HLA-DOA-201ENST00000229829 ZC3HAV1Q7Z2W4 902 aaKnown RBP8.35□□□□□ -1.07
HLA-DOA-201ENST00000229829 C17orf78Q8N4C9 275 aa8.35□□□□□ -1.07
HLA-DOA-201ENST00000229829 OR52N5Q8NH56 324 aa8.35□□□□□ -1.07
HLA-DOA-201ENST00000229829 LMX1AQ8TE12 382 aa8.35□□□□□ -1.07
HLA-DOA-201ENST00000229829 ASB17Q8WXJ9 295 aa8.35□□□□□ -1.07
HLA-DOA-201ENST00000229829 PHYHIPLQ96FC7 376 aa8.35□□□□□ -1.07
HLA-DOA-201ENST00000229829 TAF9BQ9HBM6 251 aa8.35□□□□□ -1.07
HLA-DOA-201ENST00000229829 PDE7BQ9NP56 450 aa8.35□□□□□ -1.07
HLA-DOA-201ENST00000229829 G6PC2Q9NQR9 355 aa8.35□□□□□ -1.07
HLA-DOA-201ENST00000229829 CENPMQ9NSP4 180 aa8.35□□□□□ -1.07
HLA-DOA-201ENST00000229829 BLACEA4D250 179 aa8.34□□□□□ -1.07
HLA-DOA-201ENST00000229829 SHISA7A6NL88 538 aa8.34□□□□□ -1.07
HLA-DOA-201ENST00000229829 DBX1A6NMT0 343 aa8.34□□□□□ -1.07
HLA-DOA-201ENST00000229829 PLPP3O14495 311 aa8.34□□□□□ -1.07
HLA-DOA-201ENST00000229829 LDLRAD4O15165 306 aa8.34□□□□□ -1.07
HLA-DOA-201ENST00000229829 TSPAN2O60636 221 aa8.34□□□□□ -1.07
HLA-DOA-201ENST00000229829 SRSF10O75494 262 aaKnown RBP8.34□□□□□ -1.07
HLA-DOA-201ENST00000229829 C1QL1O75973 258 aa8.34□□□□□ -1.07
HLA-DOA-201ENST00000229829 F10P00742 488 aa8.34□□□□□ -1.07
HLA-DOA-201ENST00000229829 IFNA10P01566 189 aa8.34□□□□□ -1.07
HLA-DOA-201ENST00000229829 MMP7P09237 267 aaPredicted RBP8.34□□□□□ -1.07
HLA-DOA-201ENST00000229829 EIF1AXP47813 144 aaKnown RBP8.34□□□□□ -1.07
HLA-DOA-201ENST00000229829 RAP1AP62834 184 aa8.34□□□□□ -1.07
HLA-DOA-201ENST00000229829 PLCXD2Q0VAA5 305 aa8.34□□□□□ -1.07
HLA-DOA-201ENST00000229829 OR2T2Q6IF00 324 aa8.34□□□□□ -1.07
HLA-DOA-201ENST00000229829 SPNS3Q6ZMD2 512 aa8.34□□□□□ -1.07
HLA-DOA-201ENST00000229829 ADGRE4PQ86SQ3 457 aa8.34□□□□□ -1.07
HLA-DOA-201ENST00000229829 ADAMTS18Q8TE60 1221 aa8.34□□□□□ -1.07
HLA-DOA-201ENST00000229829 HPSE2Q8WWQ2 592 aa8.34□□□□□ -1.07
HLA-DOA-201ENST00000229829 TPSD1Q9BZJ3 242 aa8.34□□□□□ -1.07
HLA-DOA-201ENST00000229829 PTGES2Q9H7Z7 377 aa8.34□□□□□ -1.07
HLA-DOA-201ENST00000229829 SLC17A5Q9NRA2 495 aa8.34□□□□□ -1.07
HLA-DOA-201ENST00000229829 CUTCQ9NTM9 273 aa8.34□□□□□ -1.07
HLA-DOA-201ENST00000229829 VSX1Q9NZR4 365 aaPredicted RBP8.34□□□□□ -1.07
HLA-DOA-201ENST00000229829 GDF2Q9UK05 429 aaPredicted RBP8.34□□□□□ -1.07
HLA-DOA-201ENST00000229829 MMP17Q9ULZ9 603 aa8.34□□□□□ -1.07
HLA-DOA-201ENST00000229829 IGHV3-20A0A0C4DH32 117 aa8.34□□□□□ -1.07
HLA-DOA-201ENST00000229829 A0A1B0GTI1 187 aa8.34□□□□□ -1.07
HLA-DOA-201ENST00000229829 TMEM269A0A1B0GVZ9 245 aa8.34□□□□□ -1.07
HLA-DOA-201ENST00000229829 SMCO3A2RU48 225 aa8.34□□□□□ -1.07
HLA-DOA-201ENST00000229829 DXOO77932 396 aaKnown RBP8.34□□□□□ -1.07
HLA-DOA-201ENST00000229829 SFTPCP11686 197 aa8.34□□□□□ -1.07
HLA-DOA-201ENST00000229829 SLC6A8P48029 635 aa8.34□□□□□ -1.07
HLA-DOA-201ENST00000229829 CAMLGP49069 296 aa8.34□□□□□ -1.07
HLA-DOA-201ENST00000229829 NSDHLQ15738 373 aa8.34□□□□□ -1.07
HLA-DOA-201ENST00000229829 DEFB133Q30KQ1 61 aa8.34□□□□□ -1.07
HLA-DOA-201ENST00000229829 C1orf189Q5VU69 101 aa8.34□□□□□ -1.07
HLA-DOA-201ENST00000229829 TIPARPQ7Z3E1 657 aaKnown RBP8.34□□□□□ -1.07
HLA-DOA-201ENST00000229829 PAQR4Q8N4S7 273 aaPredicted RBP8.34□□□□□ -1.07
HLA-DOA-201ENST00000229829 OR51F2Q8NH61 342 aa8.34□□□□□ -1.07
HLA-DOA-201ENST00000229829 RRNAD1Q96FB5 475 aaKnown RBP8.34□□□□□ -1.07
HLA-DOA-201ENST00000229829 SLC25A21Q9BQT8 299 aaPredicted RBP8.34□□□□□ -1.07
HLA-DOA-201ENST00000229829 CNTD2Q9H8S5 307 aa8.34□□□□□ -1.07
HLA-DOA-201ENST00000229829 MED29Q9NX70 200 aa8.34□□□□□ -1.07
HLA-DOA-201ENST00000229829 OR52A1Q9UKL2 312 aa8.34□□□□□ -1.07
HLA-DOA-201ENST00000229829 HHLA2Q9UM44 414 aa8.34□□□□□ -1.07
HLA-DOA-201ENST00000229829 KPTNQ9Y664 436 aa8.34□□□□□ -1.07
HLA-DOA-201ENST00000229829 IGKV3D-11A0A0A0MRZ8 115 aa8.34□□□□□ -1.07
HLA-DOA-201ENST00000229829 HSPB2A8KAH6 182 aa8.34□□□□□ -1.07
HLA-DOA-201ENST00000229829 ALG1L2C9J202 215 aa8.34□□□□□ -1.07
HLA-DOA-201ENST00000229829 RAB27BO00194 218 aa8.34□□□□□ -1.07
HLA-DOA-201ENST00000229829 MELTFP08582 738 aa8.34□□□□□ -1.07
HLA-DOA-201ENST00000229829 PGCP20142 388 aa8.34□□□□□ -1.07
HLA-DOA-201ENST00000229829 AGAP20933 346 aa8.34□□□□□ -1.07
HLA-DOA-201ENST00000229829 TUBG1P23258 451 aa8.34□□□□□ -1.07
HLA-DOA-201ENST00000229829 GLO1Q04760 184 aa8.34□□□□□ -1.07
HLA-DOA-201ENST00000229829 HSPB2Q16082 182 aa8.34□□□□□ -1.07
HLA-DOA-201ENST00000229829 MIDNQ504T8 468 aa8.34□□□□□ -1.07
HLA-DOA-201ENST00000229829 DMRTC1Q5HYR2 192 aa8.34□□□□□ -1.07
HLA-DOA-201ENST00000229829 ZNF813Q6ZN06 617 aa8.34□□□□□ -1.07
HLA-DOA-201ENST00000229829 P4HA3Q7Z4N8 544 aa8.34□□□□□ -1.07
HLA-DOA-201ENST00000229829 FJX1Q86VR8 437 aa8.34□□□□□ -1.07
HLA-DOA-201ENST00000229829 DMBX1Q8NFW5 382 aa8.34□□□□□ -1.07
HLA-DOA-201ENST00000229829 NPRL2Q8WTW4 380 aa8.34□□□□□ -1.07
HLA-DOA-201ENST00000229829 SLC25A43Q8WUT9 341 aaPredicted RBP8.34□□□□□ -1.07
HLA-DOA-201ENST00000229829 CPNE4Q96A23 557 aaPredicted RBP8.34□□□□□ -1.07
HLA-DOA-201ENST00000229829 FGGYQ96C11 551 aa8.34□□□□□ -1.07
HLA-DOA-201ENST00000229829 SPACA5Q96QH8 159 aa8.34□□□□□ -1.07
HLA-DOA-201ENST00000229829 FOXQ1Q9C009 403 aa8.34□□□□□ -1.07
HLA-DOA-201ENST00000229829 ZNF700Q9H0M5 742 aa8.34□□□□□ -1.07
HLA-DOA-201ENST00000229829 SLC2A4RGQ9NR83 387 aa8.34□□□□□ -1.07
HLA-DOA-201ENST00000229829 SIRT7Q9NRC8 400 aa8.34□□□□□ -1.07
HLA-DOA-201ENST00000229829 GPR27Q9NS67 375 aa8.34□□□□□ -1.07
HLA-DOA-201ENST00000229829 SLC5A6Q9Y289 635 aa8.34□□□□□ -1.07
HLA-DOA-201ENST00000229829 RHBDD3Q9Y3P4 386 aa8.34□□□□□ -1.07
HLA-DOA-201ENST00000229829 FREM2Q5SZK8 3169 aa8.34□□□□□ -1.08
HLA-DOA-201ENST00000229829 TNFSF12-TNFSF13A0A0A6YY99 330 aa8.33□□□□□ -1.08
HLA-DOA-201ENST00000229829 CYB5BO43169 146 aa8.33□□□□□ -1.08
HLA-DOA-201ENST00000229829 TNFSF12O43508 249 aa8.33□□□□□ -1.08
HLA-DOA-201ENST00000229829 CD8AP01732 235 aa8.33□□□□□ -1.08
HLA-DOA-201ENST00000229829 GALNSP34059 522 aa8.33□□□□□ -1.08
HLA-DOA-201ENST00000229829 FASLGP48023 281 aa8.33□□□□□ -1.08
HLA-DOA-201ENST00000229829 FHITP49789 147 aa8.33□□□□□ -1.08
HLA-DOA-201ENST00000229829 UNC119Q13432 240 aa8.33□□□□□ -1.08
HLA-DOA-201ENST00000229829 CLEC12BQ2HXU8 276 aa8.33□□□□□ -1.08
HLA-DOA-201ENST00000229829 HLA-DQA1Q5Y7H0 255 aa8.33□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms