RNA–Protein interactions for RNA: ENST00000639695.1

RFC1-217, Transcript of replication factor C subunit 1, humanhuman

TSL 5 BASIC

Gene RFC1, Length 867 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC1-217ENST00000639695 SNAI2O43623 268 aa4.35□□□□□ -1.71
RFC1-217ENST00000639695 PGAM1P18669 254 aa4.35□□□□□ -1.71
RFC1-217ENST00000639695 RPS9P46781 194 aaKnown RBP4.35□□□□□ -1.71
RFC1-217ENST00000639695 IFITM3Q01628 133 aa4.35□□□□□ -1.71
RFC1-217ENST00000639695 TRDNQ13061 729 aa4.35□□□□□ -1.71
RFC1-217ENST00000639695 COTL1Q14019 142 aa4.35□□□□□ -1.71
RFC1-217ENST00000639695 LRRC6Q86X45 466 aa4.35□□□□□ -1.71
RFC1-217ENST00000639695 ZNF584Q8IVC4 421 aa4.35□□□□□ -1.71
RFC1-217ENST00000639695 ADTRPQ96IZ2 230 aa4.35□□□□□ -1.71
RFC1-217ENST00000639695 Q96MT0 163 aa4.35□□□□□ -1.71
RFC1-217ENST00000639695 VAT1Q99536 393 aa4.35□□□□□ -1.71
RFC1-217ENST00000639695 CTRCQ99895 268 aa4.35□□□□□ -1.71
RFC1-217ENST00000639695 CHAC1Q9BUX1 264 aa4.35□□□□□ -1.71
RFC1-217ENST00000639695 EMC6Q9BV81 110 aa4.35□□□□□ -1.71
RFC1-217ENST00000639695 NRBP2Q9NSY0 501 aa4.35□□□□□ -1.71
RFC1-217ENST00000639695 MS4A12Q9NXJ0 267 aa4.35□□□□□ -1.71
RFC1-217ENST00000639695 NDRG2Q9UN36 371 aaKnown RBP4.35□□□□□ -1.71
RFC1-217ENST00000639695 USP42Q9H9J4 1324 aaKnown RBP4.35□□□□□ -1.71
RFC1-217ENST00000639695 ZNFX1Q9P2E3 1918 aaKnown RBP4.34□□□□□ -1.71
RFC1-217ENST00000639695 DNASE2O00115 360 aaPredicted RBP4.34□□□□□ -1.71
RFC1-217ENST00000639695 TAAR5O14804 337 aa4.34□□□□□ -1.71
RFC1-217ENST00000639695 SLC22A5O76082 557 aa4.34□□□□□ -1.71
RFC1-217ENST00000639695 APLNRP35414 380 aa4.34□□□□□ -1.71
RFC1-217ENST00000639695 HTR2BP41595 481 aa4.34□□□□□ -1.71
RFC1-217ENST00000639695 GALR1P47211 349 aa4.34□□□□□ -1.71
RFC1-217ENST00000639695 PPOXP50336 477 aa4.34□□□□□ -1.71
RFC1-217ENST00000639695 ERFP50548 548 aa4.34□□□□□ -1.71
RFC1-217ENST00000639695 OR2B6P58173 313 aa4.34□□□□□ -1.71
RFC1-217ENST00000639695 RPL23P62829 140 aaKnown RBP4.34□□□□□ -1.71
RFC1-217ENST00000639695 RAP1AP62834 184 aa4.34□□□□□ -1.71
RFC1-217ENST00000639695 NDPQ00604 133 aa4.34□□□□□ -1.71
RFC1-217ENST00000639695 NAB1Q13506 487 aa4.34□□□□□ -1.71
RFC1-217ENST00000639695 OR4D1Q15615 310 aa4.34□□□□□ -1.71
RFC1-217ENST00000639695 FBXW9Q5XUX1 488 aa4.34□□□□□ -1.71
RFC1-217ENST00000639695 CEMP1Q6PRD7 247 aaPredicted RBP4.34□□□□□ -1.71
RFC1-217ENST00000639695 EPGNQ6UW88 154 aa4.34□□□□□ -1.71
RFC1-217ENST00000639695 Q6ZVH6 145 aa4.34□□□□□ -1.71
RFC1-217ENST00000639695 Q8N976 141 aa4.34□□□□□ -1.71
RFC1-217ENST00000639695 RXFP4Q8TDU9 374 aa4.34□□□□□ -1.71
RFC1-217ENST00000639695 ZNF75AQ96N20 296 aa4.34□□□□□ -1.71
RFC1-217ENST00000639695 CAMK2N2Q96S95 79 aa4.34□□□□□ -1.71
RFC1-217ENST00000639695 PLEKHA1Q9HB21 404 aa4.34□□□□□ -1.71
RFC1-217ENST00000639695 ACOT13Q9NPJ3 140 aa4.34□□□□□ -1.71
RFC1-217ENST00000639695 DDX19AQ9NUU7 478 aaKnown RBP4.34□□□□□ -1.71
RFC1-217ENST00000639695 FADS3Q9Y5Q0 445 aa4.34□□□□□ -1.71
RFC1-217ENST00000639695 TSSC4Q9Y5U2 329 aaPredicted RBP4.34□□□□□ -1.71
RFC1-217ENST00000639695 WIF1Q9Y5W5 379 aa4.34□□□□□ -1.71
RFC1-217ENST00000639695 LRPPRCP42704 1394 aaKnown RBP4.34□□□□□ -1.71
RFC1-217ENST00000639695 BRCA1P38398 1863 aaKnown RBP4.33□□□□□ -1.72
RFC1-217ENST00000639695 IGKV1-8A0A0C4DH67 115 aa4.33□□□□□ -1.72
RFC1-217ENST00000639695 GOLGA8IPA6NC78 632 aa4.33□□□□□ -1.72
RFC1-217ENST00000639695 M0R1B8 84 aa4.33□□□□□ -1.72
RFC1-217ENST00000639695 PLPP3O14495 311 aa4.33□□□□□ -1.72
RFC1-217ENST00000639695 CALUO43852 315 aaPredicted RBP4.33□□□□□ -1.72
RFC1-217ENST00000639695 RP2O75695 350 aa4.33□□□□□ -1.72
RFC1-217ENST00000639695 CDK14O94921 469 aa4.33□□□□□ -1.72
RFC1-217ENST00000639695 GLSO94925 669 aaPredicted RBP4.33□□□□□ -1.72
RFC1-217ENST00000639695 MMP7P09237 267 aaPredicted RBP4.33□□□□□ -1.72
RFC1-217ENST00000639695 CD70P32970 193 aa4.33□□□□□ -1.72
RFC1-217ENST00000639695 CRATP43155 626 aa4.33□□□□□ -1.72
RFC1-217ENST00000639695 RPS10P46783 165 aaKnown RBP4.33□□□□□ -1.72
RFC1-217ENST00000639695 CCR6P51684 374 aa4.33□□□□□ -1.72
RFC1-217ENST00000639695 MNAT1P51948 309 aa4.33□□□□□ -1.72
RFC1-217ENST00000639695 RBMY1FQ15415 496 aaKnown RBP4.33□□□□□ -1.72
RFC1-217ENST00000639695 RNF212Q495C1 297 aa4.33□□□□□ -1.72
RFC1-217ENST00000639695 STEAP4Q687X5 459 aa4.33□□□□□ -1.72
RFC1-217ENST00000639695 ZNF530Q6P9A1 599 aaPredicted RBP4.33□□□□□ -1.72
RFC1-217ENST00000639695 TRMT10CQ7L0Y3 403 aaKnown RBP4.33□□□□□ -1.72
RFC1-217ENST00000639695 MDP1Q86V88 176 aa4.33□□□□□ -1.72
RFC1-217ENST00000639695 CD302Q8IX05 232 aa4.33□□□□□ -1.72
RFC1-217ENST00000639695 OR7G1Q8NGA0 311 aa4.33□□□□□ -1.72
RFC1-217ENST00000639695 PTX4Q96A99 478 aa4.33□□□□□ -1.72
RFC1-217ENST00000639695 OR2A5Q96R48 311 aa4.33□□□□□ -1.72
RFC1-217ENST00000639695 PDCD1LG2Q9BQ51 273 aa4.33□□□□□ -1.72
RFC1-217ENST00000639695 TMEM243Q9BU79 118 aa4.33□□□□□ -1.72
RFC1-217ENST00000639695 SFXN3Q9BWM7 321 aa4.33□□□□□ -1.72
RFC1-217ENST00000639695 PRORYQ9H606 182 aa4.33□□□□□ -1.72
RFC1-217ENST00000639695 HMG20AQ9NP66 347 aa4.33□□□□□ -1.72
RFC1-217ENST00000639695 ZDHHC4Q9NPG8 344 aa4.33□□□□□ -1.72
RFC1-217ENST00000639695 RPS6KB2Q9UBS0 482 aa4.33□□□□□ -1.72
RFC1-217ENST00000639695 TP53TG3Q9ULZ0 132 aa4.33□□□□□ -1.72
RFC1-217ENST00000639695 URGCP-MRPS24S4R325 110 aa4.33□□□□□ -1.72
RFC1-217ENST00000639695 COL2A1P02458 1487 aaPredicted RBP4.32□□□□□ -1.72
RFC1-217ENST00000639695 TRBV6-6A0A0A6YYG2 114 aa4.32□□□□□ -1.72
RFC1-217ENST00000639695 A0A1B0GTI1 187 aa4.32□□□□□ -1.72
RFC1-217ENST00000639695 SLC5A10A0PJK1 596 aa4.32□□□□□ -1.72
RFC1-217ENST00000639695 TNFRSF11BO00300 401 aa4.32□□□□□ -1.72
RFC1-217ENST00000639695 ZNF19P17023 458 aa4.32□□□□□ -1.72
RFC1-217ENST00000639695 ELK1P19419 428 aa4.32□□□□□ -1.72
RFC1-217ENST00000639695 UGT2B10P36537 528 aa4.32□□□□□ -1.72
RFC1-217ENST00000639695 OR12D2P58182 307 aa4.32□□□□□ -1.72
RFC1-217ENST00000639695 CYP24A1Q07973 514 aa4.32□□□□□ -1.72
RFC1-217ENST00000639695 PMS2P3Q13401 168 aa4.32□□□□□ -1.72
RFC1-217ENST00000639695 SYT6Q5T7P8 510 aaPredicted RBP4.32□□□□□ -1.72
RFC1-217ENST00000639695 ZNF691Q5VV52 312 aa4.32□□□□□ -1.72
RFC1-217ENST00000639695 CYB5R2Q6BCY4 276 aa4.32□□□□□ -1.72
RFC1-217ENST00000639695 AHSA2Q719I0 299 aa4.32□□□□□ -1.72
RFC1-217ENST00000639695 CYP4Z1Q86W10 505 aa4.32□□□□□ -1.72
RFC1-217ENST00000639695 FAM9CQ8IZT9 166 aa4.32□□□□□ -1.72
RFC1-217ENST00000639695 ATPAF2Q8N5M1 289 aa4.32□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 311.7 ms