RNA–Protein interactions for RNA: ENST00000639300.1

SCARB2-216, Transcript of scavenger receptor class B member 2, humanhuman

TSL 5

Gene SCARB2, Length 4,554 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-216ENST00000639300 ZNF416Q9BWM5 594 aa12.88□□□□□ -0.35
SCARB2-216ENST00000639300 EP400Q96L91 3159 aa12.88□□□□□ -0.35
SCARB2-216ENST00000639300 OR13C7P0DN81 318 aa12.88□□□□□ -0.35
SCARB2-216ENST00000639300 TNFSF4P23510 183 aa12.88□□□□□ -0.35
SCARB2-216ENST00000639300 PTGER4P35408 488 aa12.88□□□□□ -0.35
SCARB2-216ENST00000639300 LIMS1P48059 325 aa12.88□□□□□ -0.35
SCARB2-216ENST00000639300 DSCR4P56555 118 aaPredicted RBP12.88□□□□□ -0.35
SCARB2-216ENST00000639300 INSM1Q01101 510 aaPredicted RBP12.88□□□□□ -0.35
SCARB2-216ENST00000639300 ZNF266Q14584 549 aa12.88□□□□□ -0.35
SCARB2-216ENST00000639300 OR2B11Q5JQS5 317 aa12.88□□□□□ -0.35
SCARB2-216ENST00000639300 TRILQ7L0X0 811 aa12.88□□□□□ -0.35
SCARB2-216ENST00000639300 ZNF687Q8N1G0 1237 aa12.88□□□□□ -0.35
SCARB2-216ENST00000639300 SMRP1Q8NCR6 262 aa12.88□□□□□ -0.35
SCARB2-216ENST00000639300 CNTD2Q9H8S5 307 aa12.88□□□□□ -0.35
SCARB2-216ENST00000639300 RBBP6Q7Z6E9 1792 aaKnown RBP12.88□□□□□ -0.35
SCARB2-216ENST00000639300 RAB27BO00194 218 aa12.88□□□□□ -0.35
SCARB2-216ENST00000639300 ACSM4P0C7M7 580 aa12.88□□□□□ -0.35
SCARB2-216ENST00000639300 EPHA8P29322 1005 aaPredicted RBP12.88□□□□□ -0.35
SCARB2-216ENST00000639300 RPL12P30050 165 aaKnown RBP12.88□□□□□ -0.35
SCARB2-216ENST00000639300 ECI1P42126 302 aa12.88□□□□□ -0.35
SCARB2-216ENST00000639300 SKP2Q13309 424 aa12.88□□□□□ -0.35
SCARB2-216ENST00000639300 TESK1Q15569 626 aa12.88□□□□□ -0.35
SCARB2-216ENST00000639300 CST9LP1Q5W188 147 aa12.88□□□□□ -0.35
SCARB2-216ENST00000639300 TSEN54Q7Z6J9 526 aaKnown RBP12.88□□□□□ -0.35
SCARB2-216ENST00000639300 UBALD2Q8IYN6 164 aa12.88□□□□□ -0.35
SCARB2-216ENST00000639300 OR2V1Q8NHB1 315 aa12.88□□□□□ -0.35
SCARB2-216ENST00000639300 FBXW5Q969U6 566 aa12.88□□□□□ -0.35
SCARB2-216ENST00000639300 CMTM3Q96MX0 182 aa12.88□□□□□ -0.35
SCARB2-216ENST00000639300 PPP1R3EQ9H7J1 279 aa12.88□□□□□ -0.35
SCARB2-216ENST00000639300 MRPS18AQ9NVS2 196 aaKnown RBP12.88□□□□□ -0.35
SCARB2-216ENST00000639300 P4HTMQ9NXG6 502 aa12.88□□□□□ -0.35
SCARB2-216ENST00000639300 PURGQ9UJV8 347 aaKnown RBP12.88□□□□□ -0.35
SCARB2-216ENST00000639300 OR5H15A6NDH6 313 aa12.87□□□□□ -0.35
SCARB2-216ENST00000639300 TNFSF15O95150 251 aa12.87□□□□□ -0.35
SCARB2-216ENST00000639300 IFNA10P01566 189 aa12.87□□□□□ -0.35
SCARB2-216ENST00000639300 TBPP20226 339 aa12.87□□□□□ -0.35
SCARB2-216ENST00000639300 PPIAP62937 165 aaKnown RBP12.87□□□□□ -0.35
SCARB2-216ENST00000639300 SPATA46Q5T0L3 261 aa12.87□□□□□ -0.35
SCARB2-216ENST00000639300 DEGS2Q6QHC5 323 aa12.87□□□□□ -0.35
SCARB2-216ENST00000639300 SLC22A18ASQ8N1D0 253 aa12.87□□□□□ -0.35
SCARB2-216ENST00000639300 OR2G3Q8NGZ4 309 aa12.87□□□□□ -0.35
SCARB2-216ENST00000639300 UBALD1Q8TB05 177 aa12.87□□□□□ -0.35
SCARB2-216ENST00000639300 ZNF275Q9NSD4 429 aaPredicted RBP12.87□□□□□ -0.35
SCARB2-216ENST00000639300 ZNF629Q9UEG4 869 aaPredicted RBP12.87□□□□□ -0.35
SCARB2-216ENST00000639300 A0A087WZY1 265 aa12.87□□□□□ -0.35
SCARB2-216ENST00000639300 PTP4A3O75365 173 aa12.87□□□□□ -0.35
SCARB2-216ENST00000639300 PPP1R1AQ13522 171 aa12.87□□□□□ -0.35
SCARB2-216ENST00000639300 TBC1D28Q2M2D7 210 aa12.87□□□□□ -0.35
SCARB2-216ENST00000639300 TMEM128Q5BJH2 165 aa12.87□□□□□ -0.35
SCARB2-216ENST00000639300 ADAM5Q6NVV9 412 aa12.87□□□□□ -0.35
SCARB2-216ENST00000639300 PP6455Q8WZ26 134 aa12.87□□□□□ -0.35
SCARB2-216ENST00000639300 LIN37Q96GY3 246 aaPredicted RBP12.87□□□□□ -0.35
SCARB2-216ENST00000639300 SLC39A9Q9NUM3 307 aa12.87□□□□□ -0.35
SCARB2-216ENST00000639300 TMEM127O75204 238 aa12.87□□□□□ -0.35
SCARB2-216ENST00000639300 HLA-DOBP13765 273 aa12.87□□□□□ -0.35
SCARB2-216ENST00000639300 FCARP24071 287 aa12.87□□□□□ -0.35
SCARB2-216ENST00000639300 RAG2P55895 527 aa12.87□□□□□ -0.35
SCARB2-216ENST00000639300 NKX6-1P78426 367 aaPredicted RBP12.87□□□□□ -0.35
SCARB2-216ENST00000639300 ARHGEF39Q8N4T4 335 aa12.87□□□□□ -0.35
SCARB2-216ENST00000639300 SPACA1Q9HBV2 294 aa12.87□□□□□ -0.35
SCARB2-216ENST00000639300 GFOD1Q9NXC2 390 aa12.87□□□□□ -0.35
SCARB2-216ENST00000639300 SIRPB1O00241 398 aa12.86□□□□□ -0.35
SCARB2-216ENST00000639300 WNT11O96014 354 aa12.86□□□□□ -0.35
SCARB2-216ENST00000639300 CCL4P13236 92 aa12.86□□□□□ -0.35
SCARB2-216ENST00000639300 PTAFRP25105 342 aa12.86□□□□□ -0.35
SCARB2-216ENST00000639300 NANOS3P60323 173 aaKnown RBP12.86□□□□□ -0.35
SCARB2-216ENST00000639300 HBG1P69891 147 aa12.86□□□□□ -0.35
SCARB2-216ENST00000639300 HBG2P69892 147 aa12.86□□□□□ -0.35
SCARB2-216ENST00000639300 TMEM88Q6PEY1 159 aa12.86□□□□□ -0.35
SCARB2-216ENST00000639300 DTWD2Q8NBA8 298 aa12.86□□□□□ -0.35
SCARB2-216ENST00000639300 TMEM100Q9NV29 134 aa12.86□□□□□ -0.35
SCARB2-216ENST00000639300 KCNE5Q9UJ90 142 aa12.86□□□□□ -0.35
SCARB2-216ENST00000639300 SNRNP200O75643 2136 aaKnown RBP12.86□□□□□ -0.35
SCARB2-216ENST00000639300 MDC1Q14676 2089 aaKnown RBP12.86□□□□□ -0.35
SCARB2-216ENST00000639300 TMIGD3P0DMS9 266 aaPredicted RBP12.86□□□□□ -0.35
SCARB2-216ENST00000639300 SELENOPP49908 381 aa12.86□□□□□ -0.35
SCARB2-216ENST00000639300 P2RX3P56373 397 aa12.86□□□□□ -0.35
SCARB2-216ENST00000639300 TM4SF19Q96DZ7 209 aa12.86□□□□□ -0.35
SCARB2-216ENST00000639300 RASL10BQ96S79 203 aa12.86□□□□□ -0.35
SCARB2-216ENST00000639300 DSPPQ9NZW4 1301 aa12.86□□□□□ -0.35
SCARB2-216ENST00000639300 ZNF468Q5VIY5 522 aaPredicted RBP12.86□□□□□ -0.35
SCARB2-216ENST00000639300 LSRQ86X29 649 aaPredicted RBP12.86□□□□□ -0.35
SCARB2-216ENST00000639300 MAP6Q96JE9 813 aa12.86□□□□□ -0.35
SCARB2-216ENST00000639300 PLEKHF2Q9H8W4 249 aa12.86□□□□□ -0.35
SCARB2-216ENST00000639300 DYNLRB1Q9NP97 96 aa12.86□□□□□ -0.35
SCARB2-216ENST00000639300 URGCP-MRPS24S4R325 110 aa12.86□□□□□ -0.35
SCARB2-216ENST00000639300 RGPD4Q7Z3J3 1758 aa12.86□□□□□ -0.35
SCARB2-216ENST00000639300 HPNP05981 417 aa12.86□□□□□ -0.35
SCARB2-216ENST00000639300 FABP6P51161 128 aa12.86□□□□□ -0.35
SCARB2-216ENST00000639300 MZT1Q08AG7 82 aa12.86□□□□□ -0.35
SCARB2-216ENST00000639300 PLGLAQ15195 96 aa12.86□□□□□ -0.35
SCARB2-216ENST00000639300 ZNF774Q6NX45 483 aa12.86□□□□□ -0.35
SCARB2-216ENST00000639300 DHRS13Q6UX07 377 aa12.86□□□□□ -0.35
SCARB2-216ENST00000639300 Q6ZRG5 221 aa12.86□□□□□ -0.35
SCARB2-216ENST00000639300 ZNF808Q8N4W9 903 aaPredicted RBP12.86□□□□□ -0.35
SCARB2-216ENST00000639300 ARRDC1Q8N5I2 433 aa12.86□□□□□ -0.35
SCARB2-216ENST00000639300 OR1F12Q8NHA8 337 aa12.86□□□□□ -0.35
SCARB2-216ENST00000639300 C2orf50Q96LR7 162 aa12.86□□□□□ -0.35
SCARB2-216ENST00000639300 OCIAD1Q9NX40 245 aa12.86□□□□□ -0.35
SCARB2-216ENST00000639300 PPP1R3CQ9UQK1 317 aa12.86□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 223.7 ms