RNA–Protein interactions for RNA: ENST00000638009.1

CACNA1A-257, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CACNA1A, Length 8,665 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-257ENST00000638009 OR10J1P30954 320 aa17.61■□□□□ 0.41
CACNA1A-257ENST00000638009 ZDHHC23Q8IYP9 409 aa17.61■□□□□ 0.41
CACNA1A-257ENST00000638009 PELI1Q96FA3 418 aa17.61■□□□□ 0.41
CACNA1A-257ENST00000638009 DCBLD2Q96PD2 775 aa17.61■□□□□ 0.41
CACNA1A-257ENST00000638009 ANKRD61A6NGH8 418 aa17.6■□□□□ 0.41
CACNA1A-257ENST00000638009 PRRG2O14669 202 aa17.6■□□□□ 0.41
CACNA1A-257ENST00000638009 PDPNQ86YL7 162 aa17.6■□□□□ 0.41
CACNA1A-257ENST00000638009 TMEM251Q8N6I4 163 aa17.6■□□□□ 0.41
CACNA1A-257ENST00000638009 TMEM102Q8N9M5 508 aaPredicted RBP17.6■□□□□ 0.41
CACNA1A-257ENST00000638009 DHRS4Q9BTZ2 278 aa17.6■□□□□ 0.41
CACNA1A-257ENST00000638009 A0A1W2PPC4 97 aa17.6■□□□□ 0.41
CACNA1A-257ENST00000638009 MFSD2BA6NFX1 497 aa17.6■□□□□ 0.41
CACNA1A-257ENST00000638009 SGK494Q96LW2 274 aa17.6■□□□□ 0.41
CACNA1A-257ENST00000638009 TMEM167BQ9NRX6 74 aa17.6■□□□□ 0.41
CACNA1A-257ENST00000638009 USP3Q9Y6I4 520 aa17.6■□□□□ 0.41
CACNA1A-257ENST00000638009 NEURL4Q96JN8 1562 aa17.6■□□□□ 0.41
CACNA1A-257ENST00000638009 MDH2P40926 338 aaKnown RBP17.6■□□□□ 0.41
CACNA1A-257ENST00000638009 LAIR1Q6GTX8 287 aa17.6■□□□□ 0.41
CACNA1A-257ENST00000638009 TMEM37Q8WXS4 190 aa17.6■□□□□ 0.41
CACNA1A-257ENST00000638009 CHST6Q9GZX3 395 aa17.6■□□□□ 0.41
CACNA1A-257ENST00000638009 TMED7-TICAM2A0A0A6YYA0 188 aa17.6■□□□□ 0.41
CACNA1A-257ENST00000638009 OOEPA6NGQ2 149 aa17.6■□□□□ 0.41
CACNA1A-257ENST00000638009 BCL7CQ8WUZ0 217 aaPredicted RBP17.6■□□□□ 0.41
CACNA1A-257ENST00000638009 MAP6Q96JE9 813 aa17.6■□□□□ 0.41
CACNA1A-257ENST00000638009 HSFX1Q9UBD0 423 aa17.6■□□□□ 0.41
CACNA1A-257ENST00000638009 MOB4Q9Y3A3 225 aa17.6■□□□□ 0.41
CACNA1A-257ENST00000638009 TMED7Q9Y3B3 224 aa17.6■□□□□ 0.41
CACNA1A-257ENST00000638009 TRAV34A0A0B4J273 112 aa17.6■□□□□ 0.41
CACNA1A-257ENST00000638009 EDN3P14138 238 aa17.6■□□□□ 0.41
CACNA1A-257ENST00000638009 HOXD13P35453 343 aa17.6■□□□□ 0.41
CACNA1A-257ENST00000638009 PARS2Q7L3T8 475 aaKnown RBP17.6■□□□□ 0.41
CACNA1A-257ENST00000638009 OR2I1PQ8NGU4 316 aa17.6■□□□□ 0.41
CACNA1A-257ENST00000638009 IKZF4Q9H2S9 585 aa17.6■□□□□ 0.41
CACNA1A-257ENST00000638009 NAGKQ9UJ70 344 aa17.6■□□□□ 0.41
CACNA1A-257ENST00000638009 A0A0A6YYC8 382 aaPredicted RBP17.6■□□□□ 0.41
CACNA1A-257ENST00000638009 I3L1I5 382 aaPredicted RBP17.6■□□□□ 0.41
CACNA1A-257ENST00000638009 HIST1H1EP10412 219 aaKnown RBP17.6■□□□□ 0.41
CACNA1A-257ENST00000638009 PRDX1Q06830 199 aaKnown RBP17.6■□□□□ 0.41
CACNA1A-257ENST00000638009 MED25Q71SY5 747 aa17.6■□□□□ 0.41
CACNA1A-257ENST00000638009 ITGB4P16144 1822 aa17.6■□□□□ 0.41
CACNA1A-257ENST00000638009 JOSD1Q15040 202 aaPredicted RBP17.59■□□□□ 0.41
CACNA1A-257ENST00000638009 OR5AU1Q8NGC0 362 aa17.59■□□□□ 0.41
CACNA1A-257ENST00000638009 FOXN4Q96NZ1 517 aa17.59■□□□□ 0.41
CACNA1A-257ENST00000638009 SLC10A3P09131 477 aa17.59■□□□□ 0.41
CACNA1A-257ENST00000638009 RPS4Y1P22090 263 aaKnown RBP17.59■□□□□ 0.41
CACNA1A-257ENST00000638009 OR52E1Q8NGJ3 308 aa17.59■□□□□ 0.41
CACNA1A-257ENST00000638009 GPR87Q9BY21 358 aa17.59■□□□□ 0.41
CACNA1A-257ENST00000638009 WSB1Q9Y6I7 421 aa17.59■□□□□ 0.41
CACNA1A-257ENST00000638009 OR2A25A4D2G3 310 aa17.59■□□□□ 0.41
CACNA1A-257ENST00000638009 C1orf61Q13536 156 aa17.59■□□□□ 0.41
CACNA1A-257ENST00000638009 FAM71E1Q6IPT2 247 aa17.59■□□□□ 0.41
CACNA1A-257ENST00000638009 EIF4E2O60573 245 aaKnown RBP17.59■□□□□ 0.41
CACNA1A-257ENST00000638009 TSPAN13O95857 204 aa17.59■□□□□ 0.41
CACNA1A-257ENST00000638009 UQCC1Q9NVA1 299 aa17.59■□□□□ 0.41
CACNA1A-257ENST00000638009 ACAA2P42765 397 aaKnown RBP17.59■□□□□ 0.41
CACNA1A-257ENST00000638009 SUCLG1P53597 346 aaKnown RBP17.59■□□□□ 0.41
CACNA1A-257ENST00000638009 AANATQ16613 207 aa17.59■□□□□ 0.41
CACNA1A-257ENST00000638009 ERVS71-1P61550 626 aa17.59■□□□□ 0.41
CACNA1A-257ENST00000638009 SLC36A1Q7Z2H8 476 aa17.59■□□□□ 0.41
CACNA1A-257ENST00000638009 LYRM4Q9HD34 91 aa17.59■□□□□ 0.41
CACNA1A-257ENST00000638009 CST4P01036 141 aa17.59■□□□□ 0.41
CACNA1A-257ENST00000638009 RPL27P61353 136 aaKnown RBP17.59■□□□□ 0.41
CACNA1A-257ENST00000638009 C10orf126Q8N4M7 172 aa17.59■□□□□ 0.41
CACNA1A-257ENST00000638009 TMEM204Q9BSN7 226 aa17.59■□□□□ 0.41
CACNA1A-257ENST00000638009 TEAD1P28347 426 aa17.58■□□□□ 0.41
CACNA1A-257ENST00000638009 SORT1Q99523 831 aa17.58■□□□□ 0.41
CACNA1A-257ENST00000638009 C4AP0C0L4 1744 aa17.58■□□□□ 0.41
CACNA1A-257ENST00000638009 C4BP0C0L5 1744 aa17.58■□□□□ 0.41
CACNA1A-257ENST00000638009 SLC17A5Q9NRA2 495 aa17.58■□□□□ 0.41
CACNA1A-257ENST00000638009 CD38P28907 300 aa17.58■□□□□ 0.4
CACNA1A-257ENST00000638009 SRP9P49458 86 aaKnown RBP17.58■□□□□ 0.4
CACNA1A-257ENST00000638009 ZNF542PQ5EBM4 170 aa17.58■□□□□ 0.4
CACNA1A-257ENST00000638009 FUNDC1Q8IVP5 155 aa17.58■□□□□ 0.4
CACNA1A-257ENST00000638009 OR2T10Q8NGZ9 312 aa17.58■□□□□ 0.4
CACNA1A-257ENST00000638009 TMEM70Q9BUB7 260 aa17.58■□□□□ 0.4
CACNA1A-257ENST00000638009 PDE6DO43924 150 aa17.58■□□□□ 0.4
CACNA1A-257ENST00000638009 Q56UQ5 140 aa17.58■□□□□ 0.4
CACNA1A-257ENST00000638009 TCFL5Q9UL49 500 aa17.58■□□□□ 0.4
CACNA1A-257ENST00000638009 CD40P25942 277 aa17.58■□□□□ 0.4
CACNA1A-257ENST00000638009 CLDN18P56856 261 aa17.58■□□□□ 0.4
CACNA1A-257ENST00000638009 TMEM183AQ8IXX5 376 aa17.58■□□□□ 0.4
CACNA1A-257ENST00000638009 ADPRHL1Q8NDY3 354 aa17.58■□□□□ 0.4
CACNA1A-257ENST00000638009 EGLN2Q96KS0 407 aa17.58■□□□□ 0.4
CACNA1A-257ENST00000638009 RIMBP3CA6NJZ7 1639 aa17.58■□□□□ 0.4
CACNA1A-257ENST00000638009 RIMBP3BA6NNM3 1639 aa17.58■□□□□ 0.4
CACNA1A-257ENST00000638009 LRRC37A3O60309 1634 aa17.58■□□□□ 0.4
CACNA1A-257ENST00000638009 RIMBP3Q9UFD9 1639 aa17.58■□□□□ 0.4
CACNA1A-257ENST00000638009 THADAQ6YHU6 1953 aa17.58■□□□□ 0.4
CACNA1A-257ENST00000638009 PTGFRP43088 359 aa17.58■□□□□ 0.4
CACNA1A-257ENST00000638009 IL24Q13007 206 aa17.58■□□□□ 0.4
CACNA1A-257ENST00000638009 C1orf140Q5VVS0 124 aa17.58■□□□□ 0.4
CACNA1A-257ENST00000638009 MYPOPQ86VE0 399 aaPredicted RBP17.58■□□□□ 0.4
CACNA1A-257ENST00000638009 PTRH1Q86Y79 214 aaKnown RBP17.58■□□□□ 0.4
CACNA1A-257ENST00000638009 C5orf17Q8NAS9 161 aa17.58■□□□□ 0.4
CACNA1A-257ENST00000638009 PP6455Q8WZ26 134 aa17.58■□□□□ 0.4
CACNA1A-257ENST00000638009 RBM14Q96PK6 669 aaKnown RBP17.58■□□□□ 0.4
CACNA1A-257ENST00000638009 C1QTNF3Q9BXJ4 246 aa17.58■□□□□ 0.4
CACNA1A-257ENST00000638009 Q9N2K0 584 aa17.58■□□□□ 0.4
CACNA1A-257ENST00000638009 ACY3Q96HD9 319 aa17.58■□□□□ 0.4
CACNA1A-257ENST00000638009 ANGPTL4Q9BY76 406 aa17.58■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms