RNA–Protein interactions for RNA: ENST00000636964.1

CLN6-217, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 2

Gene CLN6, Length 3,335 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-217ENST00000636964 BOLLQ8N9W6 283 aaKnown RBP10.19□□□□□ -0.78
CLN6-217ENST00000636964 SMIM4Q8WVI0 70 aa10.19□□□□□ -0.78
CLN6-217ENST00000636964 OR8B4Q96RC9 309 aa10.19□□□□□ -0.78
CLN6-217ENST00000636964 UCN2Q96RP3 112 aa10.19□□□□□ -0.78
CLN6-217ENST00000636964 WDR13Q9H1Z4 485 aa10.19□□□□□ -0.78
CLN6-217ENST00000636964 SEC61A2Q9H9S3 476 aa10.19□□□□□ -0.78
CLN6-217ENST00000636964 MYEF2Q9P2K5 600 aaKnown RBP10.19□□□□□ -0.78
CLN6-217ENST00000636964 GHRLQ9UBU3 117 aa10.19□□□□□ -0.78
CLN6-217ENST00000636964 ARL6IP5O75915 188 aa10.18□□□□□ -0.78
CLN6-217ENST00000636964 OPN1MWP04001 364 aa10.18□□□□□ -0.78
CLN6-217ENST00000636964 OPN1MW2P0DN77 364 aa10.18□□□□□ -0.78
CLN6-217ENST00000636964 OPN1MW3P0DN78 364 aa10.18□□□□□ -0.78
CLN6-217ENST00000636964 PPP3CBP16298 524 aa10.18□□□□□ -0.78
CLN6-217ENST00000636964 PSMB1P20618 241 aaKnown RBP10.18□□□□□ -0.78
CLN6-217ENST00000636964 ITGA3P26006 1051 aa10.18□□□□□ -0.78
CLN6-217ENST00000636964 CDAP32320 146 aa10.18□□□□□ -0.78
CLN6-217ENST00000636964 CYB561P49447 251 aa10.18□□□□□ -0.78
CLN6-217ENST00000636964 CLRN1P58418 232 aa10.18□□□□□ -0.78
CLN6-217ENST00000636964 EGR3Q06889 387 aa10.18□□□□□ -0.78
CLN6-217ENST00000636964 DYRK1AQ13627 763 aa10.18□□□□□ -0.78
CLN6-217ENST00000636964 SLC17A1Q14916 467 aa10.18□□□□□ -0.78
CLN6-217ENST00000636964 GUCA2BQ16661 112 aa10.18□□□□□ -0.78
CLN6-217ENST00000636964 ATP1A1-AS1Q5TC04 95 aa10.18□□□□□ -0.78
CLN6-217ENST00000636964 DCXRQ7Z4W1 244 aa10.18□□□□□ -0.78
CLN6-217ENST00000636964 MEIOBQ8N635 442 aa10.18□□□□□ -0.78
CLN6-217ENST00000636964 SLC26A10Q8NG04 563 aa10.18□□□□□ -0.78
CLN6-217ENST00000636964 C12orf49Q9H741 205 aa10.18□□□□□ -0.78
CLN6-217ENST00000636964 CENPMQ9NSP4 180 aa10.18□□□□□ -0.78
CLN6-217ENST00000636964 PLA2G3Q9NZ20 509 aa10.18□□□□□ -0.78
CLN6-217ENST00000636964 KLK11Q9UBX7 282 aa10.18□□□□□ -0.78
CLN6-217ENST00000636964 OPN4Q9UHM6 478 aa10.18□□□□□ -0.78
CLN6-217ENST00000636964 FBXL3Q9UKT7 428 aa10.18□□□□□ -0.78
CLN6-217ENST00000636964 ZFHX2Q9C0A1 2572 aaPredicted RBP10.18□□□□□ -0.78
CLN6-217ENST00000636964 PINLYPA6NC86 204 aa10.18□□□□□ -0.78
CLN6-217ENST00000636964 TNFSF11O14788 317 aa10.18□□□□□ -0.78
CLN6-217ENST00000636964 GSTZ1O43708 216 aaPredicted RBP10.18□□□□□ -0.78
CLN6-217ENST00000636964 TRAF3IP2O43734 574 aaPredicted RBP10.18□□□□□ -0.78
CLN6-217ENST00000636964 GPRIN2O60269 458 aa10.18□□□□□ -0.78
CLN6-217ENST00000636964 VSIG10L2P0DP72 767 aa10.18□□□□□ -0.78
CLN6-217ENST00000636964 MPGP29372 298 aa10.18□□□□□ -0.78
CLN6-217ENST00000636964 PSMA6P60900 246 aaKnown RBP10.18□□□□□ -0.78
CLN6-217ENST00000636964 EIF3IQ13347 325 aaKnown RBP10.18□□□□□ -0.78
CLN6-217ENST00000636964 LINC00303Q3SY05 128 aa10.18□□□□□ -0.78
CLN6-217ENST00000636964 WDR38Q5JTN6 314 aa10.18□□□□□ -0.78
CLN6-217ENST00000636964 LINC00696Q6ZRV3 163 aa10.18□□□□□ -0.78
CLN6-217ENST00000636964 ARMC10Q8N2F6 343 aa10.18□□□□□ -0.78
CLN6-217ENST00000636964 OR14L1PQ8NHC6 308 aa10.18□□□□□ -0.78
CLN6-217ENST00000636964 SLC25A43Q8WUT9 341 aaPredicted RBP10.18□□□□□ -0.78
CLN6-217ENST00000636964 MIB2Q96AX9 1013 aa10.18□□□□□ -0.78
CLN6-217ENST00000636964 MRPL37Q9BZE1 423 aaKnown RBP10.18□□□□□ -0.78
CLN6-217ENST00000636964 DNTTIP1Q9H147 329 aa10.18□□□□□ -0.78
CLN6-217ENST00000636964 HDGFL3Q9Y3E1 203 aa10.18□□□□□ -0.78
CLN6-217ENST00000636964 NCKAP5O14513 1909 aa10.18□□□□□ -0.78
CLN6-217ENST00000636964 BTBD17A6NE02 478 aa10.18□□□□□ -0.78
CLN6-217ENST00000636964 OR4C45A6NMZ5 311 aa10.18□□□□□ -0.78
CLN6-217ENST00000636964 EFSO43281 561 aa10.18□□□□□ -0.78
CLN6-217ENST00000636964 SPP1P10451 314 aa10.18□□□□□ -0.78
CLN6-217ENST00000636964 CLDN17P56750 224 aa10.18□□□□□ -0.78
CLN6-217ENST00000636964 MFGE8Q08431 387 aaPredicted RBP10.18□□□□□ -0.78
CLN6-217ENST00000636964 ZNF626Q68DY1 528 aa10.18□□□□□ -0.78
CLN6-217ENST00000636964 H3F3CQ6NXT2 135 aa10.18□□□□□ -0.78
CLN6-217ENST00000636964 UNQ9370/PRO34162Q6UXP9 181 aa10.18□□□□□ -0.78
CLN6-217ENST00000636964 ZNF679Q8IYX0 411 aa10.18□□□□□ -0.78
CLN6-217ENST00000636964 OR10H5Q8NGA6 315 aa10.18□□□□□ -0.78
CLN6-217ENST00000636964 FAM216AQ8WUB2 273 aa10.18□□□□□ -0.78
CLN6-217ENST00000636964 DERL3Q96Q80 235 aa10.18□□□□□ -0.78
CLN6-217ENST00000636964 GPR87Q9BY21 358 aa10.18□□□□□ -0.78
CLN6-217ENST00000636964 HES7Q9BYE0 225 aa10.18□□□□□ -0.78
CLN6-217ENST00000636964 LRFN1Q9P244 771 aa10.18□□□□□ -0.78
CLN6-217ENST00000636964 A0A087WZY1 265 aa10.17□□□□□ -0.78
CLN6-217ENST00000636964 A0A0J9YW62 118 aa10.17□□□□□ -0.78
CLN6-217ENST00000636964 A0A1W2PNV4 684 aa10.17□□□□□ -0.78
CLN6-217ENST00000636964 RFPL4AA6NLU0 287 aa10.17□□□□□ -0.78
CLN6-217ENST00000636964 RFPL4AL1F8VTS6 287 aa10.17□□□□□ -0.78
CLN6-217ENST00000636964 KHDRBS3O75525 346 aaKnown RBP10.17□□□□□ -0.78
CLN6-217ENST00000636964 CPN1P15169 458 aa10.17□□□□□ -0.78
CLN6-217ENST00000636964 CD96P40200 585 aa10.17□□□□□ -0.78
CLN6-217ENST00000636964 CLDN12P56749 244 aa10.17□□□□□ -0.78
CLN6-217ENST00000636964 RAP2BP61225 183 aa10.17□□□□□ -0.78
CLN6-217ENST00000636964 RNF212Q495C1 297 aa10.17□□□□□ -0.78
CLN6-217ENST00000636964 WIPI1Q5MNZ9 446 aaPredicted RBP10.17□□□□□ -0.78
CLN6-217ENST00000636964 ZFP82Q8N141 532 aa10.17□□□□□ -0.78
CLN6-217ENST00000636964 PXT1Q8NFP0 134 aa10.17□□□□□ -0.78
CLN6-217ENST00000636964 OR52I2Q8NH67 350 aa10.17□□□□□ -0.78
CLN6-217ENST00000636964 RPS4Y2Q8TD47 263 aa10.17□□□□□ -0.78
CLN6-217ENST00000636964 C11orf40Q8WZ69 217 aa10.17□□□□□ -0.78
CLN6-217ENST00000636964 PNPLA2Q96AD5 504 aa10.17□□□□□ -0.78
CLN6-217ENST00000636964 OXGR1Q96P68 337 aa10.17□□□□□ -0.78
CLN6-217ENST00000636964 LRP12Q9Y561 859 aa10.17□□□□□ -0.78
CLN6-217ENST00000636964 TRAV1-2A0A0B4J238 106 aa10.17□□□□□ -0.78
CLN6-217ENST00000636964 TMIGD3P0DMS9 266 aaPredicted RBP10.17□□□□□ -0.78
CLN6-217ENST00000636964 EPXP11678 715 aa10.17□□□□□ -0.78
CLN6-217ENST00000636964 ACHEP22303 614 aa10.17□□□□□ -0.78
CLN6-217ENST00000636964 SLC35A1P78382 337 aa10.17□□□□□ -0.78
CLN6-217ENST00000636964 SNTB1Q13884 538 aaKnown RBP10.17□□□□□ -0.78
CLN6-217ENST00000636964 DCAF10Q5QP82 559 aa10.17□□□□□ -0.78
CLN6-217ENST00000636964 DNM1P34Q6PK57 102 aa10.17□□□□□ -0.78
CLN6-217ENST00000636964 DNAAF1Q8NEP3 725 aa10.17□□□□□ -0.78
CLN6-217ENST00000636964 DMBX1Q8NFW5 382 aa10.17□□□□□ -0.78
CLN6-217ENST00000636964 THRSPQ92748 146 aa10.17□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 52 ms