RNA–Protein interactions for RNA: ENST00000622668.4

HDAC9-229, Transcript of histone deacetylase 9, humanhuman

TSL 2 BASIC

Gene HDAC9, Length 4,279 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-229ENST00000622668 NRIP3Q9NQ35 241 aa7.98□□□□□ -1.13
HDAC9-229ENST00000622668 KIAA1456Q9P272 454 aa7.98□□□□□ -1.13
HDAC9-229ENST00000622668 KCNE5Q9UJ90 142 aa7.98□□□□□ -1.13
HDAC9-229ENST00000622668 DIMT1Q9UNQ2 313 aaKnown RBP7.98□□□□□ -1.13
HDAC9-229ENST00000622668 C2orf16Q68DN1 1984 aa7.98□□□□□ -1.13
HDAC9-229ENST00000622668 ZAR1LA6NP61 321 aa7.98□□□□□ -1.13
HDAC9-229ENST00000622668 H7C1Q1 480 aa7.98□□□□□ -1.13
HDAC9-229ENST00000622668 CYTIPO60759 359 aa7.98□□□□□ -1.13
HDAC9-229ENST00000622668 SNCAP37840 140 aa7.98□□□□□ -1.13
HDAC9-229ENST00000622668 GABARAPL2P60520 117 aa7.98□□□□□ -1.13
HDAC9-229ENST00000622668 RPS4XP62701 263 aaKnown RBP7.98□□□□□ -1.13
HDAC9-229ENST00000622668 HNF4GQ14541 408 aa7.98□□□□□ -1.13
HDAC9-229ENST00000622668 MESTQ5EB52 335 aa7.98□□□□□ -1.13
HDAC9-229ENST00000622668 TIMM23BQ5SRD1 257 aa7.98□□□□□ -1.13
HDAC9-229ENST00000622668 MOB3BQ86TA1 216 aa7.98□□□□□ -1.13
HDAC9-229ENST00000622668 SKA3Q8IX90 412 aa7.98□□□□□ -1.13
HDAC9-229ENST00000622668 OR51A2Q8NGJ7 313 aa7.98□□□□□ -1.13
HDAC9-229ENST00000622668 OR2M2Q96R28 347 aa7.98□□□□□ -1.13
HDAC9-229ENST00000622668 NICN1Q9BSH3 213 aa7.98□□□□□ -1.13
HDAC9-229ENST00000622668 TBC1D24Q9ULP9 559 aa7.98□□□□□ -1.13
HDAC9-229ENST00000622668 ST3GAL6Q9Y274 331 aa7.98□□□□□ -1.13
HDAC9-229ENST00000622668 NCBP2LA6PVI3 153 aaKnown RBP7.98□□□□□ -1.13
HDAC9-229ENST00000622668 ZNF182P17025 639 aaPredicted RBP7.98□□□□□ -1.13
HDAC9-229ENST00000622668 FUT6P51993 359 aa7.98□□□□□ -1.13
HDAC9-229ENST00000622668 UCP2P55851 309 aa7.98□□□□□ -1.13
HDAC9-229ENST00000622668 CAV3P56539 151 aa7.98□□□□□ -1.13
HDAC9-229ENST00000622668 RAB14P61106 215 aa7.98□□□□□ -1.13
HDAC9-229ENST00000622668 LSM6P62312 80 aaKnown RBP7.98□□□□□ -1.13
HDAC9-229ENST00000622668 MLLT11Q13015 90 aaPredicted RBP7.98□□□□□ -1.13
HDAC9-229ENST00000622668 CATR1Q13166 79 aa7.98□□□□□ -1.13
HDAC9-229ENST00000622668 DCTN2Q13561 401 aaKnown RBP7.98□□□□□ -1.13
HDAC9-229ENST00000622668 HLXQ14774 488 aaPredicted RBP7.98□□□□□ -1.13
HDAC9-229ENST00000622668 AADACL3Q5VUY0 350 aa7.98□□□□□ -1.13
HDAC9-229ENST00000622668 UGT2A3Q6UWM9 527 aa7.98□□□□□ -1.13
HDAC9-229ENST00000622668 NKAIN3Q8N8D7 197 aa7.98□□□□□ -1.13
HDAC9-229ENST00000622668 CXXC4Q9H2H0 198 aa7.98□□□□□ -1.13
HDAC9-229ENST00000622668 EHFQ9NZC4 300 aa7.98□□□□□ -1.13
HDAC9-229ENST00000622668 PRELID3BQ9Y3B1 194 aa7.98□□□□□ -1.13
HDAC9-229ENST00000622668 C7orf72A4D263 438 aa7.98□□□□□ -1.13
HDAC9-229ENST00000622668 HAX1O00165 279 aa7.98□□□□□ -1.13
HDAC9-229ENST00000622668 RAB27BO00194 218 aa7.98□□□□□ -1.13
HDAC9-229ENST00000622668 SLC33A1O00400 549 aaPredicted RBP7.98□□□□□ -1.13
HDAC9-229ENST00000622668 SULT1C4O75897 302 aa7.98□□□□□ -1.13
HDAC9-229ENST00000622668 APOA2P02652 100 aa7.98□□□□□ -1.13
HDAC9-229ENST00000622668 PTH2RP49190 550 aa7.98□□□□□ -1.13
HDAC9-229ENST00000622668 PDLIM4P50479 330 aa7.98□□□□□ -1.13
HDAC9-229ENST00000622668 OR6M1Q8NGM8 313 aa7.98□□□□□ -1.13
HDAC9-229ENST00000622668 BORCS5Q969J3 196 aa7.98□□□□□ -1.13
HDAC9-229ENST00000622668 OR5M11Q96RB7 305 aa7.98□□□□□ -1.13
HDAC9-229ENST00000622668 SPRR3Q9UBC9 169 aa7.98□□□□□ -1.13
HDAC9-229ENST00000622668 RNF7Q9UBF6 113 aa7.98□□□□□ -1.13
HDAC9-229ENST00000622668 GBF1Q92538 1859 aa7.97□□□□□ -1.13
HDAC9-229ENST00000622668 ZNF724A8MTY0 619 aa7.97□□□□□ -1.13
HDAC9-229ENST00000622668 NUDT19A8MXV4 375 aa7.97□□□□□ -1.13
HDAC9-229ENST00000622668 TUSC2O75896 110 aa7.97□□□□□ -1.13
HDAC9-229ENST00000622668 TBX6O95947 436 aaPredicted RBP7.97□□□□□ -1.13
HDAC9-229ENST00000622668 CA7P43166 264 aa7.97□□□□□ -1.13
HDAC9-229ENST00000622668 SLC25A1P53007 311 aa7.97□□□□□ -1.13
HDAC9-229ENST00000622668 SNRPGP62308 76 aaKnown RBP7.97□□□□□ -1.13
HDAC9-229ENST00000622668 BSPH1Q075Z2 132 aa7.97□□□□□ -1.13
HDAC9-229ENST00000622668 RIPPLY2Q5TAB7 128 aa7.97□□□□□ -1.13
HDAC9-229ENST00000622668 OR1K1Q8NGR3 316 aa7.97□□□□□ -1.13
HDAC9-229ENST00000622668 KCNK17Q96T54 332 aa7.97□□□□□ -1.13
HDAC9-229ENST00000622668 S1PR3Q99500 378 aa7.97□□□□□ -1.13
HDAC9-229ENST00000622668 FUNDC2Q9BWH2 189 aa7.97□□□□□ -1.13
HDAC9-229ENST00000622668 ZNF385DQ9H6B1 395 aa7.97□□□□□ -1.13
HDAC9-229ENST00000622668 A0A0C4DFX4 3053 aa7.97□□□□□ -1.13
HDAC9-229ENST00000622668 ZNF354AO60765 605 aaPredicted RBP7.97□□□□□ -1.13
HDAC9-229ENST00000622668 TGFAP01135 160 aa7.97□□□□□ -1.13
HDAC9-229ENST00000622668 IFNA17P01571 189 aa7.97□□□□□ -1.13
HDAC9-229ENST00000622668 CBR1P16152 277 aa7.97□□□□□ -1.13
HDAC9-229ENST00000622668 CPEP16870 476 aa7.97□□□□□ -1.13
HDAC9-229ENST00000622668 MST1P26927 711 aa7.97□□□□□ -1.13
HDAC9-229ENST00000622668 PCGF3Q3KNV8 242 aa7.97□□□□□ -1.13
HDAC9-229ENST00000622668 GPR157Q5UAW9 335 aa7.97□□□□□ -1.13
HDAC9-229ENST00000622668 PP6455Q8WZ26 134 aa7.97□□□□□ -1.13
HDAC9-229ENST00000622668 RPEQ96AT9 228 aa7.97□□□□□ -1.13
HDAC9-229ENST00000622668 SNX18Q96RF0 628 aa7.97□□□□□ -1.13
HDAC9-229ENST00000622668 CHST6Q9GZX3 395 aa7.97□□□□□ -1.13
HDAC9-229ENST00000622668 SLC25A19Q9HC21 320 aa7.97□□□□□ -1.13
HDAC9-229ENST00000622668 OR2S2Q9NQN1 319 aa7.97□□□□□ -1.13
HDAC9-229ENST00000622668 RHBDL2Q9NX52 303 aa7.97□□□□□ -1.13
HDAC9-229ENST00000622668 TLN2Q9Y4G6 2542 aa7.97□□□□□ -1.13
HDAC9-229ENST00000622668 NYNRINQ9P2P1 1898 aaKnown RBP7.97□□□□□ -1.13
HDAC9-229ENST00000622668 ZNF736B4DX44 427 aaPredicted RBP7.97□□□□□ -1.13
HDAC9-229ENST00000622668 RAMP1O60894 148 aa7.97□□□□□ -1.13
HDAC9-229ENST00000622668 WBP4O75554 376 aaKnown RBP7.97□□□□□ -1.13
HDAC9-229ENST00000622668 RAB3DO95716 219 aa7.97□□□□□ -1.13
HDAC9-229ENST00000622668 UBBP0CG47 229 aa7.97□□□□□ -1.13
HDAC9-229ENST00000622668 GLI4P10075 376 aa7.97□□□□□ -1.13
HDAC9-229ENST00000622668 DEFA4P12838 97 aa7.97□□□□□ -1.13
HDAC9-229ENST00000622668 SNRPBP14678 240 aaKnown RBP7.97□□□□□ -1.13
HDAC9-229ENST00000622668 RPS25P62851 125 aaKnown RBP7.97□□□□□ -1.13
HDAC9-229ENST00000622668 GNB1P62873 340 aa7.97□□□□□ -1.13
HDAC9-229ENST00000622668 METTL11BQ5VVY1 283 aa7.97□□□□□ -1.13
HDAC9-229ENST00000622668 PRAMEF6Q5VXH4 476 aa7.97□□□□□ -1.13
HDAC9-229ENST00000622668 ZNF385CQ66K41 422 aaPredicted RBP7.97□□□□□ -1.13
HDAC9-229ENST00000622668 CCDC71LQ8N9Z2 235 aa7.97□□□□□ -1.13
HDAC9-229ENST00000622668 OR52N1Q8NH53 320 aa7.97□□□□□ -1.13
HDAC9-229ENST00000622668 ACOT12Q8WYK0 555 aa7.97□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 77.4 ms