RNA–Protein interactions for RNA: ENST00000618902.1

SHMT1-211, Transcript of serine hydroxymethyltransferase 1, humanhuman

TSL 5 BASIC

Gene SHMT1, Length 378 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT1-211ENST00000618902 ARSBP15848 533 aa4.54□□□□□ -1.68
SHMT1-211ENST00000618902 SPNP16150 400 aa4.54□□□□□ -1.68
SHMT1-211ENST00000618902 RAB3BP20337 219 aa4.54□□□□□ -1.68
SHMT1-211ENST00000618902 CD40P25942 277 aa4.54□□□□□ -1.68
SHMT1-211ENST00000618902 STOMP27105 288 aa4.54□□□□□ -1.68
SHMT1-211ENST00000618902 LAP3P28838 519 aa4.54□□□□□ -1.68
SHMT1-211ENST00000618902 APOBEC3AP31941 199 aaPredicted RBP4.54□□□□□ -1.68
SHMT1-211ENST00000618902 PYCR1P32322 319 aa4.54□□□□□ -1.68
SHMT1-211ENST00000618902 CLRN1P58418 232 aa4.54□□□□□ -1.68
SHMT1-211ENST00000618902 RAP1BP61224 184 aa4.54□□□□□ -1.68
SHMT1-211ENST00000618902 RPS23P62266 143 aaKnown RBP4.54□□□□□ -1.68
SHMT1-211ENST00000618902 RAP1AP62834 184 aa4.54□□□□□ -1.68
SHMT1-211ENST00000618902 RPS25P62851 125 aaKnown RBP4.54□□□□□ -1.68
SHMT1-211ENST00000618902 NKX6-1P78426 367 aaPredicted RBP4.54□□□□□ -1.68
SHMT1-211ENST00000618902 SNTB2Q13425 540 aaKnown RBP4.54□□□□□ -1.68
SHMT1-211ENST00000618902 CRMP1Q14194 572 aa4.54□□□□□ -1.68
SHMT1-211ENST00000618902 ENDOGQ14249 297 aaKnown RBP4.54□□□□□ -1.68
SHMT1-211ENST00000618902 MEP1BQ16820 701 aa4.54□□□□□ -1.68
SHMT1-211ENST00000618902 MSMPQ1L6U9 139 aa4.54□□□□□ -1.68
SHMT1-211ENST00000618902 PLA1AQ53H76 456 aa4.54□□□□□ -1.68
SHMT1-211ENST00000618902 CEP78Q5JTW2 689 aa4.54□□□□□ -1.68
SHMT1-211ENST00000618902 ELFN2Q5R3F8 820 aa4.54□□□□□ -1.68
SHMT1-211ENST00000618902 ZNF57Q68EA5 555 aaPredicted RBP4.54□□□□□ -1.68
SHMT1-211ENST00000618902 SFXN4Q6P4A7 337 aa4.54□□□□□ -1.68
SHMT1-211ENST00000618902 LEG1Q6P5S2 330 aa4.54□□□□□ -1.68
SHMT1-211ENST00000618902 LRRN1Q6UXK5 716 aa4.54□□□□□ -1.68
SHMT1-211ENST00000618902 UNQ9370/PRO34162Q6UXP9 181 aa4.54□□□□□ -1.68
SHMT1-211ENST00000618902 ZNF813Q6ZN06 617 aa4.54□□□□□ -1.68
SHMT1-211ENST00000618902 TMEM91Q6ZNR0 172 aa4.54□□□□□ -1.68
SHMT1-211ENST00000618902 CEACAM19Q7Z692 300 aa4.54□□□□□ -1.68
SHMT1-211ENST00000618902 SYT9Q86SS6 491 aa4.54□□□□□ -1.68
SHMT1-211ENST00000618902 ZNF584Q8IVC4 421 aa4.54□□□□□ -1.68
SHMT1-211ENST00000618902 OR6V1Q8N148 313 aa4.54□□□□□ -1.68
SHMT1-211ENST00000618902 SLC22A24Q8N4F4 322 aa4.54□□□□□ -1.68
SHMT1-211ENST00000618902 TOMM5Q8N4H5 51 aa4.54□□□□□ -1.68
SHMT1-211ENST00000618902 YIPF7Q8N8F6 280 aa4.54□□□□□ -1.68
SHMT1-211ENST00000618902 SLC37A3Q8NCC5 494 aa4.54□□□□□ -1.68
SHMT1-211ENST00000618902 SDR9C7Q8NEX9 313 aa4.54□□□□□ -1.68
SHMT1-211ENST00000618902 NUP37Q8NFH4 326 aa4.54□□□□□ -1.68
SHMT1-211ENST00000618902 BBS1Q8NFJ9 593 aa4.54□□□□□ -1.68
SHMT1-211ENST00000618902 OR52E2Q8NGJ4 325 aa4.54□□□□□ -1.68
SHMT1-211ENST00000618902 SMAP2Q8WU79 429 aaPredicted RBP4.54□□□□□ -1.68
SHMT1-211ENST00000618902 PTP4A1Q93096 173 aa4.54□□□□□ -1.68
SHMT1-211ENST00000618902 FBXO17Q96EF6 278 aa4.54□□□□□ -1.68
SHMT1-211ENST00000618902 S100A16Q96FQ6 103 aaKnown RBP4.54□□□□□ -1.68
SHMT1-211ENST00000618902 C18orf12Q96KH6 178 aa4.54□□□□□ -1.68
SHMT1-211ENST00000618902 NEDD4LQ96PU5 975 aa4.54□□□□□ -1.68
SHMT1-211ENST00000618902 FOXB1Q99853 325 aa4.54□□□□□ -1.68
SHMT1-211ENST00000618902 DHRS9Q9BPW9 319 aa4.54□□□□□ -1.68
SHMT1-211ENST00000618902 HDHD2Q9H0R4 259 aa4.54□□□□□ -1.68
SHMT1-211ENST00000618902 SLITRK2Q9H156 845 aa4.54□□□□□ -1.68
SHMT1-211ENST00000618902 ABCG5Q9H222 651 aa4.54□□□□□ -1.68
SHMT1-211ENST00000618902 ZNF442Q9H7R0 627 aa4.54□□□□□ -1.68
SHMT1-211ENST00000618902 GPN1Q9HCN4 374 aaPredicted RBP4.54□□□□□ -1.68
SHMT1-211ENST00000618902 CBLN4Q9NTU7 201 aa4.54□□□□□ -1.68
SHMT1-211ENST00000618902 MRPL22Q9NWU5 206 aaKnown RBP4.54□□□□□ -1.68
SHMT1-211ENST00000618902 CISD1Q9NZ45 108 aaKnown RBP4.54□□□□□ -1.68
SHMT1-211ENST00000618902 EXTL2Q9UBQ6 330 aa4.54□□□□□ -1.68
SHMT1-211ENST00000618902 CYB5R1Q9UHQ9 305 aa4.54□□□□□ -1.68
SHMT1-211ENST00000618902 GPR160Q9UJ42 338 aa4.54□□□□□ -1.68
SHMT1-211ENST00000618902 B9D1Q9UPM9 204 aa4.54□□□□□ -1.68
SHMT1-211ENST00000618902 COA3Q9Y2R0 106 aaPredicted RBP4.54□□□□□ -1.68
SHMT1-211ENST00000618902 ETV7Q9Y603 341 aa4.54□□□□□ -1.68
SHMT1-211ENST00000618902 CACNG2Q9Y698 323 aa4.54□□□□□ -1.68
SHMT1-211ENST00000618902 TMEM14AQ9Y6G1 99 aa4.54□□□□□ -1.68
SHMT1-211ENST00000618902 RAI1Q7Z5J4 1906 aaPredicted RBP4.54□□□□□ -1.68
SHMT1-211ENST00000618902 ANKRD34BA5PLL1 514 aa4.53□□□□□ -1.68
SHMT1-211ENST00000618902 FAM183AA6NL82 134 aa4.53□□□□□ -1.68
SHMT1-211ENST00000618902 SHISA9B4DS77 424 aa4.53□□□□□ -1.68
SHMT1-211ENST00000618902 B9A039 149 aa4.53□□□□□ -1.68
SHMT1-211ENST00000618902 J3QW42 95 aa4.53□□□□□ -1.68
SHMT1-211ENST00000618902 ABCD4O14678 606 aa4.53□□□□□ -1.68
SHMT1-211ENST00000618902 SLC16A7O60669 478 aa4.53□□□□□ -1.68
SHMT1-211ENST00000618902 KHDRBS3O75525 346 aaKnown RBP4.53□□□□□ -1.68
SHMT1-211ENST00000618902 RGS11O94810 467 aa4.53□□□□□ -1.68
SHMT1-211ENST00000618902 TCRBP04435 133 aa4.53□□□□□ -1.68
SHMT1-211ENST00000618902 GYPBP06028 91 aa4.53□□□□□ -1.68
SHMT1-211ENST00000618902 ADRA2AP08913 450 aa4.53□□□□□ -1.68
SHMT1-211ENST00000618902 UCHL1P09936 223 aa4.53□□□□□ -1.68
SHMT1-211ENST00000618902 CECR9P0C854 216 aa4.53□□□□□ -1.68
SHMT1-211ENST00000618902 DANCRP0C864 163 aa4.53□□□□□ -1.68
SHMT1-211ENST00000618902 ANXA3P12429 323 aa4.53□□□□□ -1.68
SHMT1-211ENST00000618902 CBR1P16152 277 aa4.53□□□□□ -1.68
SHMT1-211ENST00000618902 ZNF32P17041 273 aa4.53□□□□□ -1.68
SHMT1-211ENST00000618902 ELK1P19419 428 aa4.53□□□□□ -1.68
SHMT1-211ENST00000618902 SLC2A5P22732 501 aa4.53□□□□□ -1.68
SHMT1-211ENST00000618902 ANOS1P23352 680 aa4.53□□□□□ -1.68
SHMT1-211ENST00000618902 CFPP27918 469 aa4.53□□□□□ -1.68
SHMT1-211ENST00000618902 CALCRP30988 508 aa4.53□□□□□ -1.68
SHMT1-211ENST00000618902 FAUP35544 74 aaKnown RBP4.53□□□□□ -1.68
SHMT1-211ENST00000618902 ZNF84P51523 738 aa4.53□□□□□ -1.68
SHMT1-211ENST00000618902 IDH3GP51553 393 aaPredicted RBP4.53□□□□□ -1.68
SHMT1-211ENST00000618902 MECP2P51608 486 aaKnown RBP4.53□□□□□ -1.68
SHMT1-211ENST00000618902 SLC25A1P53007 311 aa4.53□□□□□ -1.68
SHMT1-211ENST00000618902 SELENOVP59797 346 aa4.53□□□□□ -1.68
SHMT1-211ENST00000618902 RAB14P61106 215 aa4.53□□□□□ -1.68
SHMT1-211ENST00000618902 PCBD1P61457 104 aa4.53□□□□□ -1.68
SHMT1-211ENST00000618902 RPS7P62081 194 aaKnown RBP4.53□□□□□ -1.68
SHMT1-211ENST00000618902 ADAM8P78325 824 aa4.53□□□□□ -1.68
SHMT1-211ENST00000618902 MRPS34P82930 218 aaKnown RBP4.53□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 66.5 ms