RNA–Protein interactions for RNA: ENST00000618606.1

TARDBP-220, Transcript of TAR DNA binding protein, humanhuman

TSL 2

Gene TARDBP, Length 584 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARDBP-220ENST00000618606 SAV1Q9H4B6 383 aaPredicted RBP1.45□□□□□ -2.18
TARDBP-220ENST00000618606 PLEKHA1Q9HB21 404 aa1.45□□□□□ -2.18
TARDBP-220ENST00000618606 VCX3AQ9NNX9 186 aa1.45□□□□□ -2.18
TARDBP-220ENST00000618606 SLC40A1Q9NP59 571 aa1.45□□□□□ -2.18
TARDBP-220ENST00000618606 ISYNA1Q9NPH2 558 aa1.45□□□□□ -2.18
TARDBP-220ENST00000618606 RRAGDQ9NQL2 400 aaPredicted RBP1.45□□□□□ -2.18
TARDBP-220ENST00000618606 OR2S2Q9NQN1 319 aa1.45□□□□□ -2.18
TARDBP-220ENST00000618606 DDIT4Q9NX09 232 aa1.45□□□□□ -2.18
TARDBP-220ENST00000618606 CYB5R1Q9UHQ9 305 aa1.45□□□□□ -2.18
TARDBP-220ENST00000618606 CACNG2Q9Y698 323 aa1.45□□□□□ -2.18
TARDBP-220ENST00000618606 MN1Q10571 1320 aaPredicted RBP1.44□□□□□ -2.18
TARDBP-220ENST00000618606 OTOGLQ3ZCN5 2332 aa1.44□□□□□ -2.18
TARDBP-220ENST00000618606 FHOD3Q2V2M9 1422 aa1.44□□□□□ -2.18
TARDBP-220ENST00000618606 IGKV1-27A0A075B6S5 117 aa1.44□□□□□ -2.18
TARDBP-220ENST00000618606 IGHV1-69DA0A0B4J2H0 117 aa1.44□□□□□ -2.18
TARDBP-220ENST00000618606 IGHV3-64DA0A0J9YX35 117 aa1.44□□□□□ -2.18
TARDBP-220ENST00000618606 ANKRD20A5PA0PJZ0 165 aa1.44□□□□□ -2.18
TARDBP-220ENST00000618606 M0QXV9 152 aa1.44□□□□□ -2.18
TARDBP-220ENST00000618606 DNASE2O00115 360 aaPredicted RBP1.44□□□□□ -2.18
TARDBP-220ENST00000618606 LAD1O00515 517 aa1.44□□□□□ -2.18
TARDBP-220ENST00000618606 RAD51BO15315 384 aa1.44□□□□□ -2.18
TARDBP-220ENST00000618606 CDC40O60508 579 aaKnown RBP eCLIP1.44□□□□□ -2.18
TARDBP-220ENST00000618606 SCN2BO60939 215 aa1.44□□□□□ -2.18
TARDBP-220ENST00000618606 ZMPSTE24O75844 475 aa1.44□□□□□ -2.18
TARDBP-220ENST00000618606 HLA-DPB1P04440 258 aa1.44□□□□□ -2.18
TARDBP-220ENST00000618606 PCCAP05165 728 aaPredicted RBP1.44□□□□□ -2.18
TARDBP-220ENST00000618606 GLAP06280 429 aa1.44□□□□□ -2.18
TARDBP-220ENST00000618606 GP1BAP07359 652 aa1.44□□□□□ -2.18
TARDBP-220ENST00000618606 CTSLP07711 333 aa1.44□□□□□ -2.18
TARDBP-220ENST00000618606 TLX1NBP0CAT3 122 aa1.44□□□□□ -2.18
TARDBP-220ENST00000618606 PAX6P26367 422 aa1.44□□□□□ -2.18
TARDBP-220ENST00000618606 SSTR5P35346 364 aa1.44□□□□□ -2.18
TARDBP-220ENST00000618606 UGT2B10P36537 528 aa1.44□□□□□ -2.18
TARDBP-220ENST00000618606 POLR2IP36954 125 aaKnown RBP1.44□□□□□ -2.18
TARDBP-220ENST00000618606 SPAM1P38567 509 aa1.44□□□□□ -2.18
TARDBP-220ENST00000618606 MAGEA6P43360 314 aa1.44□□□□□ -2.18
TARDBP-220ENST00000618606 RANBP1P43487 201 aa1.44□□□□□ -2.18
TARDBP-220ENST00000618606 KCNJ3P48549 501 aa1.44□□□□□ -2.18
TARDBP-220ENST00000618606 UBE2AP49459 152 aa1.44□□□□□ -2.18
TARDBP-220ENST00000618606 TAS2R60P59551 318 aa1.44□□□□□ -2.18
TARDBP-220ENST00000618606 UBE2NP61088 152 aaKnown RBP1.44□□□□□ -2.18
TARDBP-220ENST00000618606 RPL23P62829 140 aaKnown RBP1.44□□□□□ -2.18
TARDBP-220ENST00000618606 SLC35A1P78382 337 aa1.44□□□□□ -2.18
TARDBP-220ENST00000618606 ST3GAL4Q11206 333 aa1.44□□□□□ -2.18
TARDBP-220ENST00000618606 PMS2P3Q13401 168 aa1.44□□□□□ -2.18
TARDBP-220ENST00000618606 MADCAM1Q13477 382 aa1.44□□□□□ -2.18
TARDBP-220ENST00000618606 CHRFAM7AQ494W8 412 aa1.44□□□□□ -2.18
TARDBP-220ENST00000618606 THEM4Q5T1C6 240 aa1.44□□□□□ -2.18
TARDBP-220ENST00000618606 IGFL1Q6UW32 110 aa1.44□□□□□ -2.18
TARDBP-220ENST00000618606 AHSA2Q719I0 299 aa1.44□□□□□ -2.18
TARDBP-220ENST00000618606 C6orf120Q7Z4R8 191 aa1.44□□□□□ -2.18
TARDBP-220ENST00000618606 FAM19A1Q7Z5A9 133 aa1.44□□□□□ -2.18
TARDBP-220ENST00000618606 SETD3Q86TU7 594 aaPredicted RBP1.44□□□□□ -2.18
TARDBP-220ENST00000618606 ZNF429Q86V71 674 aa1.44□□□□□ -2.18
TARDBP-220ENST00000618606 CD302Q8IX05 232 aa1.44□□□□□ -2.18
TARDBP-220ENST00000618606 ATPAF2Q8N5M1 289 aa1.44□□□□□ -2.18
TARDBP-220ENST00000618606 ZNF645Q8N7E2 425 aa1.44□□□□□ -2.18
TARDBP-220ENST00000618606 OR13G1Q8NGZ3 307 aa1.44□□□□□ -2.18
TARDBP-220ENST00000618606 OR52P1PQ8NH57 321 aa1.44□□□□□ -2.18
TARDBP-220ENST00000618606 CLHC1Q8NHS4 586 aa1.44□□□□□ -2.18
TARDBP-220ENST00000618606 PIFOQ8TCI5 191 aa1.44□□□□□ -2.18
TARDBP-220ENST00000618606 CCDC12Q8WUD4 166 aaPredicted RBP1.44□□□□□ -2.18
TARDBP-220ENST00000618606 PDCD6IPQ8WUM4 868 aaKnown RBP1.44□□□□□ -2.18
TARDBP-220ENST00000618606 DEDD2Q8WXF8 326 aa1.44□□□□□ -2.18
TARDBP-220ENST00000618606 ING5Q8WYH8 240 aa1.44□□□□□ -2.18
TARDBP-220ENST00000618606 OR5P2Q8WZ92 322 aa1.44□□□□□ -2.18
TARDBP-220ENST00000618606 DCPSQ96C86 337 aaKnown RBP1.44□□□□□ -2.18
TARDBP-220ENST00000618606 TM4SF18Q96CE8 201 aa1.44□□□□□ -2.18
TARDBP-220ENST00000618606 HAUS1Q96CS2 278 aa1.44□□□□□ -2.18
TARDBP-220ENST00000618606 CCDC124Q96CT7 223 aaKnown RBP1.44□□□□□ -2.18
TARDBP-220ENST00000618606 RCN3Q96D15 328 aa1.44□□□□□ -2.18
TARDBP-220ENST00000618606 NEURL3Q96EH8 262 aa1.44□□□□□ -2.18
TARDBP-220ENST00000618606 BMFQ96LC9 184 aa1.44□□□□□ -2.18
TARDBP-220ENST00000618606 ZNF488Q96MN9 340 aa1.44□□□□□ -2.18
TARDBP-220ENST00000618606 TIMM17AQ99595 171 aa1.44□□□□□ -2.18
TARDBP-220ENST00000618606 COPS4Q9BT78 406 aa1.44□□□□□ -2.18
TARDBP-220ENST00000618606 TMEM243Q9BU79 118 aa1.44□□□□□ -2.18
TARDBP-220ENST00000618606 UPF3BQ9BZI7 483 aaKnown RBP1.44□□□□□ -2.18
TARDBP-220ENST00000618606 C12orf10Q9HB07 376 aa1.44□□□□□ -2.18
TARDBP-220ENST00000618606 TMEM27Q9HBJ8 222 aa1.44□□□□□ -2.18
TARDBP-220ENST00000618606 NOX3Q9HBY0 568 aa1.44□□□□□ -2.18
TARDBP-220ENST00000618606 MED4Q9NPJ6 270 aa1.44□□□□□ -2.18
TARDBP-220ENST00000618606 IFT46Q9NQC8 304 aa1.44□□□□□ -2.18
TARDBP-220ENST00000618606 SIRT7Q9NRC8 400 aa1.44□□□□□ -2.18
TARDBP-220ENST00000618606 EURLQ9NYK6 297 aa1.44□□□□□ -2.18
TARDBP-220ENST00000618606 STX18Q9P2W9 335 aaKnown RBP1.44□□□□□ -2.18
TARDBP-220ENST00000618606 CD300AQ9UGN4 299 aa1.44□□□□□ -2.18
TARDBP-220ENST00000618606 NUFIP1Q9UHK0 495 aaKnown RBP1.44□□□□□ -2.18
TARDBP-220ENST00000618606 VAX2Q9UIW0 290 aa1.44□□□□□ -2.18
TARDBP-220ENST00000618606 C15orf41Q9Y2V0 281 aa1.44□□□□□ -2.18
TARDBP-220ENST00000618606 SIGLEC9Q9Y336 463 aa1.44□□□□□ -2.18
TARDBP-220ENST00000618606 WIF1Q9Y5W5 379 aa1.44□□□□□ -2.18
TARDBP-220ENST00000618606 V9GYY5 206 aaPredicted RBP1.44□□□□□ -2.18
TARDBP-220ENST00000618606 PALLDQ8WX93 1383 aa1.44□□□□□ -2.18
TARDBP-220ENST00000618606 AQRO60306 1485 aaKnown RBP eCLIP1.43□□□□□ -2.185e-11■■□□□ 14.4
TARDBP-220ENST00000618606 COL5A1P20908 1838 aaPredicted RBP1.43□□□□□ -2.18
TARDBP-220ENST00000618606 TRBV6-6A0A0A6YYG2 114 aa1.43□□□□□ -2.18
TARDBP-220ENST00000618606 IGHV3OR16-9A0A0B4J2B5 98 aa1.43□□□□□ -2.18
TARDBP-220ENST00000618606 FAM240AA0A1B0GVK7 77 aa1.43□□□□□ -2.18
TARDBP-220ENST00000618606 A0A1B0GVX0 72 aa1.43□□□□□ -2.18
Retrieved 100 of 20,778 RNA–protein pairs in 54.2 ms