RNA–Protein interactions for RNA: ENST00000615540.4

PDLIM5-222, Transcript of PDZ and LIM domain 5, humanhuman

TSL 1 (best) BASIC

Gene PDLIM5, Length 6,219 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-222ENST00000615540 IGHV1-45A0A0A0MS14 117 aa7.93□□□□□ -1.14
PDLIM5-222ENST00000615540 TMEM229AB2RXF0 380 aa7.93□□□□□ -1.14
PDLIM5-222ENST00000615540 ZNF732B4DXR9 585 aa7.93□□□□□ -1.14
PDLIM5-222ENST00000615540 TSPAN2O60636 221 aa7.93□□□□□ -1.14
PDLIM5-222ENST00000615540 RECKO95980 971 aa7.93□□□□□ -1.14
PDLIM5-222ENST00000615540 SNRNP70P08621 437 aaKnown RBP7.93□□□□□ -1.14
PDLIM5-222ENST00000615540 ZNF14P17017 642 aaPredicted RBP7.93□□□□□ -1.14
PDLIM5-222ENST00000615540 ZNF32P17041 273 aa7.93□□□□□ -1.14
PDLIM5-222ENST00000615540 GLRA1P23415 457 aa7.93□□□□□ -1.14
PDLIM5-222ENST00000615540 FKBP2P26885 142 aaKnown RBP7.93□□□□□ -1.14
PDLIM5-222ENST00000615540 ASCL1P50553 236 aa7.93□□□□□ -1.14
PDLIM5-222ENST00000615540 ARF1P84077 181 aaKnown RBP7.93□□□□□ -1.14
PDLIM5-222ENST00000615540 ZNF766Q5HY98 468 aa7.93□□□□□ -1.14
PDLIM5-222ENST00000615540 GCNT2Q8N0V5 402 aa7.93□□□□□ -1.14
PDLIM5-222ENST00000615540 ZNF808Q8N4W9 903 aaPredicted RBP7.93□□□□□ -1.14
PDLIM5-222ENST00000615540 CPNE4Q96A23 557 aaPredicted RBP7.93□□□□□ -1.14
PDLIM5-222ENST00000615540 PGLYRP3Q96LB9 341 aa7.93□□□□□ -1.14
PDLIM5-222ENST00000615540 FAAP24Q9BTP7 215 aa7.93□□□□□ -1.14
PDLIM5-222ENST00000615540 C12orf10Q9HB07 376 aa7.93□□□□□ -1.14
PDLIM5-222ENST00000615540 SDHAF2Q9NX18 166 aa7.93□□□□□ -1.14
PDLIM5-222ENST00000615540 TCFL5Q9UL49 500 aa7.93□□□□□ -1.14
PDLIM5-222ENST00000615540 TRIM64A6NGJ6 449 aa7.93□□□□□ -1.14
PDLIM5-222ENST00000615540 AQP8O94778 261 aa7.93□□□□□ -1.14
PDLIM5-222ENST00000615540 KISS1Q15726 138 aa7.93□□□□□ -1.14
PDLIM5-222ENST00000615540 NUBPLQ8TB37 319 aa7.93□□□□□ -1.14
PDLIM5-222ENST00000615540 M1APQ8TC57 530 aa7.93□□□□□ -1.14
PDLIM5-222ENST00000615540 SCARB1Q8WTV0 552 aa7.93□□□□□ -1.14
PDLIM5-222ENST00000615540 APOBEC4Q8WW27 367 aaKnown RBP7.93□□□□□ -1.14
PDLIM5-222ENST00000615540 UBL7Q96S82 380 aaPredicted RBP7.93□□□□□ -1.14
PDLIM5-222ENST00000615540 BCO1Q9HAY6 547 aa7.93□□□□□ -1.14
PDLIM5-222ENST00000615540 DLL4Q9NR61 685 aa7.93□□□□□ -1.14
PDLIM5-222ENST00000615540 KLF13Q9Y2Y9 288 aaPredicted RBP7.93□□□□□ -1.14
PDLIM5-222ENST00000615540 FLVCR1Q9Y5Y0 555 aa7.93□□□□□ -1.14
PDLIM5-222ENST00000615540 CEBPZOSA8MTT3 80 aa7.92□□□□□ -1.14
PDLIM5-222ENST00000615540 VSTM5A8MXK1 200 aa7.92□□□□□ -1.14
PDLIM5-222ENST00000615540 H7C2Y5 167 aa7.92□□□□□ -1.14
PDLIM5-222ENST00000615540 CHRM2P08172 466 aa7.92□□□□□ -1.14
PDLIM5-222ENST00000615540 FCGR2CP31995 323 aa7.92□□□□□ -1.14
PDLIM5-222ENST00000615540 SSPNQ14714 243 aa7.92□□□□□ -1.14
PDLIM5-222ENST00000615540 ZNF674Q2M3X9 581 aa7.92□□□□□ -1.14
PDLIM5-222ENST00000615540 PAN3Q58A45 887 aaKnown RBP7.92□□□□□ -1.14
PDLIM5-222ENST00000615540 ZDHHC23Q8IYP9 409 aa7.92□□□□□ -1.14
PDLIM5-222ENST00000615540 ARID1BQ8NFD5 2236 aaPredicted RBP7.92□□□□□ -1.14
PDLIM5-222ENST00000615540 CCDC187A0A096LP49 1063 aa7.92□□□□□ -1.14
PDLIM5-222ENST00000615540 ZNF354AO60765 605 aaPredicted RBP7.92□□□□□ -1.14
PDLIM5-222ENST00000615540 NDUFB6O95139 128 aa7.92□□□□□ -1.14
PDLIM5-222ENST00000615540 SLC34A2O95436 690 aa7.92□□□□□ -1.14
PDLIM5-222ENST00000615540 ADRB1P08588 477 aa7.92□□□□□ -1.14
PDLIM5-222ENST00000615540 CD96P40200 585 aa7.92□□□□□ -1.14
PDLIM5-222ENST00000615540 RSPO4Q2I0M5 234 aaPredicted RBP7.92□□□□□ -1.14
PDLIM5-222ENST00000615540 PMS2CLQ68D20 193 aa7.92□□□□□ -1.14
PDLIM5-222ENST00000615540 FAM173AQ9BQD7 235 aa7.92□□□□□ -1.14
PDLIM5-222ENST00000615540 OR6C6A6NF89 314 aa7.92□□□□□ -1.14
PDLIM5-222ENST00000615540 KCNAB3O43448 404 aa7.92□□□□□ -1.14
PDLIM5-222ENST00000615540 DUSP1P28562 367 aa7.92□□□□□ -1.14
PDLIM5-222ENST00000615540 EDDM3BP56851 147 aa7.92□□□□□ -1.14
PDLIM5-222ENST00000615540 TEX261Q6UWH6 196 aa7.92□□□□□ -1.14
PDLIM5-222ENST00000615540 MESP1Q9BRJ9 268 aa7.92□□□□□ -1.14
PDLIM5-222ENST00000615540 LHX6Q9UPM6 363 aa7.92□□□□□ -1.14
PDLIM5-222ENST00000615540 U3KQ87 197 aa7.92□□□□□ -1.14
PDLIM5-222ENST00000615540 A0A1W2PR77 199 aa7.92□□□□□ -1.14
PDLIM5-222ENST00000615540 TOX3O15405 576 aaPredicted RBP7.92□□□□□ -1.14
PDLIM5-222ENST00000615540 SSSCA1O60232 199 aa7.92□□□□□ -1.14
PDLIM5-222ENST00000615540 NME2P1O60361 137 aa7.92□□□□□ -1.14
PDLIM5-222ENST00000615540 THBS4P35443 961 aa7.92□□□□□ -1.14
PDLIM5-222ENST00000615540 RPL23AP62750 156 aaKnown RBP7.92□□□□□ -1.14
PDLIM5-222ENST00000615540 TRA2AQ13595 282 aaKnown RBP eCLIP7.92□□□□□ -1.14
PDLIM5-222ENST00000615540 ESCO2Q56NI9 601 aa7.92□□□□□ -1.14
PDLIM5-222ENST00000615540 TMPRSS7Q7RTY8 843 aa7.92□□□□□ -1.14
PDLIM5-222ENST00000615540 OSR2Q8N2R0 312 aa7.92□□□□□ -1.14
PDLIM5-222ENST00000615540 FAM213BQ8TBF2 198 aa7.92□□□□□ -1.14
PDLIM5-222ENST00000615540 ABHD3Q8WU67 409 aa7.92□□□□□ -1.14
PDLIM5-222ENST00000615540 CTHRC1Q96CG8 243 aa7.92□□□□□ -1.14
PDLIM5-222ENST00000615540 TAF9BQ9HBM6 251 aa7.92□□□□□ -1.14
PDLIM5-222ENST00000615540 CNR1P21554 472 aa7.92□□□□□ -1.14
PDLIM5-222ENST00000615540 CHATP28329 748 aa7.92□□□□□ -1.14
PDLIM5-222ENST00000615540 ARR3P36575 388 aa7.92□□□□□ -1.14
PDLIM5-222ENST00000615540 STARD6P59095 220 aa7.92□□□□□ -1.14
PDLIM5-222ENST00000615540 TMEM182Q6ZP80 229 aaPredicted RBP7.92□□□□□ -1.14
PDLIM5-222ENST00000615540 LRRTM1Q86UE6 522 aa7.92□□□□□ -1.14
PDLIM5-222ENST00000615540 GALNT16Q8N428 558 aa7.92□□□□□ -1.14
PDLIM5-222ENST00000615540 DMBX1Q8NFW5 382 aa7.92□□□□□ -1.14
PDLIM5-222ENST00000615540 OR10J5Q8NHC4 309 aa7.92□□□□□ -1.14
PDLIM5-222ENST00000615540 C20orf24Q9BUV8 137 aa7.92□□□□□ -1.14
PDLIM5-222ENST00000615540 PBDC1Q9BVG4 233 aa7.92□□□□□ -1.14
PDLIM5-222ENST00000615540 NMNAT2Q9BZQ4 307 aa7.92□□□□□ -1.14
PDLIM5-222ENST00000615540 A0A087WV48 116 aa7.91□□□□□ -1.14
PDLIM5-222ENST00000615540 OR2M5A3KFT3 312 aa7.91□□□□□ -1.14
PDLIM5-222ENST00000615540 TMEM200CA6NKL6 621 aa7.91□□□□□ -1.14
PDLIM5-222ENST00000615540 PIGPP57054 158 aa7.91□□□□□ -1.14
PDLIM5-222ENST00000615540 ZXDAP98168 799 aa7.91□□□□□ -1.14
PDLIM5-222ENST00000615540 PPP1R1AQ13522 171 aa7.91□□□□□ -1.14
PDLIM5-222ENST00000615540 KLF9Q13886 244 aaPredicted RBP7.91□□□□□ -1.14
PDLIM5-222ENST00000615540 HLXQ14774 488 aaPredicted RBP7.91□□□□□ -1.14
PDLIM5-222ENST00000615540 RAB35Q15286 201 aa7.91□□□□□ -1.14
PDLIM5-222ENST00000615540 PLPPR5Q32ZL2 321 aa7.91□□□□□ -1.14
PDLIM5-222ENST00000615540 SP6Q3SY56 376 aa7.91□□□□□ -1.14
PDLIM5-222ENST00000615540 PABPC1L2AQ5JQF8 200 aa7.91□□□□□ -1.14
PDLIM5-222ENST00000615540 HSD17B11Q8NBQ5 300 aa7.91□□□□□ -1.14
PDLIM5-222ENST00000615540 ADAT3Q96EY9 351 aaPredicted RBP7.91□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms