RNA–Protein interactions for RNA: ENST00000608903.5

CTCFL-221, Transcript of CCCTC-binding factor like, humanhuman

TSL 1 (best) BASIC

Gene CTCFL, Length 2,135 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTCFL-221ENST00000608903 CRIM1Q9NZV1 1036 aa9.97□□□□□ -0.81
CTCFL-221ENST00000608903 TRAV8-7A0A075B6U6 113 aa9.97□□□□□ -0.81
CTCFL-221ENST00000608903 A0A0U1RQV5 110 aa9.97□□□□□ -0.81
CTCFL-221ENST00000608903 A0A1W2PQ09 198 aa9.97□□□□□ -0.81
CTCFL-221ENST00000608903 CSF3P09919 207 aa9.97□□□□□ -0.81
CTCFL-221ENST00000608903 UBCP0CG48 685 aaKnown RBP9.97□□□□□ -0.81
CTCFL-221ENST00000608903 ACKR3P25106 362 aa9.97□□□□□ -0.81
CTCFL-221ENST00000608903 EVX1P49640 407 aa9.97□□□□□ -0.81
CTCFL-221ENST00000608903 PPP3R1P63098 170 aa9.97□□□□□ -0.81
CTCFL-221ENST00000608903 SPOCK1Q08629 439 aa9.97□□□□□ -0.81
CTCFL-221ENST00000608903 HLXQ14774 488 aaPredicted RBP9.97□□□□□ -0.81
CTCFL-221ENST00000608903 TRAM1Q15629 374 aa9.97□□□□□ -0.81
CTCFL-221ENST00000608903 IDNKQ5T6J7 187 aa9.97□□□□□ -0.81
CTCFL-221ENST00000608903 TMEM244Q5VVB8 128 aa9.97□□□□□ -0.81
CTCFL-221ENST00000608903 XKRXQ6PP77 449 aa9.97□□□□□ -0.81
CTCFL-221ENST00000608903 CA5BP1Q8WTZ4 195 aa9.97□□□□□ -0.81
CTCFL-221ENST00000608903 GFI1Q99684 422 aa9.97□□□□□ -0.81
CTCFL-221ENST00000608903 PPP1R3EQ9H7J1 279 aa9.97□□□□□ -0.81
CTCFL-221ENST00000608903 NPDC1Q9NQX5 325 aaPredicted RBP9.97□□□□□ -0.81
CTCFL-221ENST00000608903 HHLA2Q9UM44 414 aa9.97□□□□□ -0.81
CTCFL-221ENST00000608903 IGHV2OR16-5A0A0B4J2B6 119 aa9.96□□□□□ -0.82
CTCFL-221ENST00000608903 MEIOCA2RUB1 952 aa9.96□□□□□ -0.82
CTCFL-221ENST00000608903 CENPXA8MT69 81 aa9.96□□□□□ -0.82
CTCFL-221ENST00000608903 M0R1B8 84 aa9.96□□□□□ -0.82
CTCFL-221ENST00000608903 SYT7O43581 403 aa9.96□□□□□ -0.82
CTCFL-221ENST00000608903 APOC1P02654 83 aa9.96□□□□□ -0.82
CTCFL-221ENST00000608903 FAM157BP0CG42 384 aa9.96□□□□□ -0.82
CTCFL-221ENST00000608903 SLC2A2P11168 524 aaPredicted RBP9.96□□□□□ -0.82
CTCFL-221ENST00000608903 MRPS15P82914 257 aaKnown RBP9.96□□□□□ -0.82
CTCFL-221ENST00000608903 NAAAQ02083 359 aa9.96□□□□□ -0.82
CTCFL-221ENST00000608903 TBC1D28Q2M2D7 210 aa9.96□□□□□ -0.82
CTCFL-221ENST00000608903 CEP78Q5JTW2 689 aa9.96□□□□□ -0.82
CTCFL-221ENST00000608903 WFDC8Q8IUA0 241 aa9.96□□□□□ -0.82
CTCFL-221ENST00000608903 OR52H1Q8NGJ2 320 aa9.96□□□□□ -0.82
CTCFL-221ENST00000608903 LINC01560Q8TB33 94 aa9.96□□□□□ -0.82
CTCFL-221ENST00000608903 SPSB4Q96A44 273 aa9.96□□□□□ -0.82
CTCFL-221ENST00000608903 FGGYQ96C11 551 aa9.96□□□□□ -0.82
CTCFL-221ENST00000608903 REEP6Q96HR9 211 aa9.96□□□□□ -0.82
CTCFL-221ENST00000608903 OR10A2Q9H208 303 aa9.96□□□□□ -0.82
CTCFL-221ENST00000608903 ZNF275Q9NSD4 429 aaPredicted RBP9.96□□□□□ -0.82
CTCFL-221ENST00000608903 LINC00854A0A1B0GVQ3 168 aa9.95□□□□□ -0.82
CTCFL-221ENST00000608903 DPRXA6NFQ7 191 aa9.95□□□□□ -0.82
CTCFL-221ENST00000608903 ICMTO60725 284 aa9.95□□□□□ -0.82
CTCFL-221ENST00000608903 SMPD2O60906 423 aa9.95□□□□□ -0.82
CTCFL-221ENST00000608903 GATBO75879 557 aaKnown RBP9.95□□□□□ -0.82
CTCFL-221ENST00000608903 ADRA2CP18825 462 aa9.95□□□□□ -0.82
CTCFL-221ENST00000608903 ELK1P19419 428 aa9.95□□□□□ -0.82
CTCFL-221ENST00000608903 FAM3AP98173 230 aa9.95□□□□□ -0.82
CTCFL-221ENST00000608903 SRSF1Q07955 248 aaKnown RBP eCLIP9.95□□□□□ -0.82
CTCFL-221ENST00000608903 MSMPQ1L6U9 139 aa9.95□□□□□ -0.82
CTCFL-221ENST00000608903 DMRTC1Q5HYR2 192 aa9.95□□□□□ -0.82
CTCFL-221ENST00000608903 SFXN4Q6P4A7 337 aa9.95□□□□□ -0.82
CTCFL-221ENST00000608903 RNF144BQ7Z419 303 aa9.95□□□□□ -0.82
CTCFL-221ENST00000608903 TSEN15Q8WW01 171 aaKnown RBP9.95□□□□□ -0.82
CTCFL-221ENST00000608903 TMEM106AQ96A25 262 aa9.95□□□□□ -0.82
CTCFL-221ENST00000608903 APOBEC3DQ96AK3 386 aaPredicted RBP9.95□□□□□ -0.82
CTCFL-221ENST00000608903 MUCL1Q96DR8 90 aa9.95□□□□□ -0.82
CTCFL-221ENST00000608903 SLC22A4Q9H015 551 aa9.95□□□□□ -0.82
CTCFL-221ENST00000608903 OR10A4Q9H209 315 aa9.95□□□□□ -0.82
CTCFL-221ENST00000608903 CDH20Q9HBT6 801 aa9.95□□□□□ -0.82
CTCFL-221ENST00000608903 KCNJ16Q9NPI9 418 aa9.95□□□□□ -0.82
CTCFL-221ENST00000608903 PTTG3PQ9NZH4 202 aa9.95□□□□□ -0.82
CTCFL-221ENST00000608903 V9GYS6 101 aa9.95□□□□□ -0.82
CTCFL-221ENST00000608903 hCG_38984A0A1B0GV85 526 aa9.95□□□□□ -0.82
CTCFL-221ENST00000608903 A0A1B0GVI7 797 aa9.95□□□□□ -0.82
CTCFL-221ENST00000608903 A8MV72 311 aaPredicted RBP9.95□□□□□ -0.82
CTCFL-221ENST00000608903 PAHP00439 452 aa9.95□□□□□ -0.82
CTCFL-221ENST00000608903 SERPINA3P01011 423 aa9.95□□□□□ -0.82
CTCFL-221ENST00000608903 SCN1BQ07699 218 aa9.95□□□□□ -0.82
CTCFL-221ENST00000608903 GK2Q14410 553 aaPredicted RBP9.95□□□□□ -0.82
CTCFL-221ENST00000608903 SPATA46Q5T0L3 261 aa9.95□□□□□ -0.82
CTCFL-221ENST00000608903 LRRTM1Q86UE6 522 aa9.95□□□□□ -0.82
CTCFL-221ENST00000608903 TPRA1Q86W33 373 aa9.95□□□□□ -0.82
CTCFL-221ENST00000608903 OR51A2Q8NGJ7 313 aa9.95□□□□□ -0.82
CTCFL-221ENST00000608903 OR13C3Q8NGS6 347 aa9.95□□□□□ -0.82
CTCFL-221ENST00000608903 NKX3-1Q99801 234 aaPredicted RBP9.95□□□□□ -0.82
CTCFL-221ENST00000608903 REPIN1Q9BWE0 567 aaKnown RBP9.95□□□□□ -0.82
CTCFL-221ENST00000608903 DHDHQ9UQ10 334 aa9.95□□□□□ -0.82
CTCFL-221ENST00000608903 SPTBN1Q01082 2364 aaKnown RBP9.95□□□□□ -0.82
CTCFL-221ENST00000608903 CHD6Q8TD26 2715 aa9.95□□□□□ -0.82
CTCFL-221ENST00000608903 A0A0B4J203 849 aa9.94□□□□□ -0.82
CTCFL-221ENST00000608903 C19orf84I3L1E1 186 aa9.94□□□□□ -0.82
CTCFL-221ENST00000608903 LILRA1O75019 489 aa9.94□□□□□ -0.82
CTCFL-221ENST00000608903 EIF4EP06730 217 aaKnown RBP9.94□□□□□ -0.82
CTCFL-221ENST00000608903 IGFBP3P17936 291 aaPredicted RBP9.94□□□□□ -0.82
CTCFL-221ENST00000608903 SRMP19623 302 aa9.94□□□□□ -0.82
CTCFL-221ENST00000608903 CFL1P23528 166 aaKnown RBP9.94□□□□□ -0.82
CTCFL-221ENST00000608903 MYL9P24844 172 aa9.94□□□□□ -0.82
CTCFL-221ENST00000608903 GSK3AP49840 483 aa9.94□□□□□ -0.82
CTCFL-221ENST00000608903 UCP2P55851 309 aa9.94□□□□□ -0.82
CTCFL-221ENST00000608903 ALKBH6Q3KRA9 238 aa9.94□□□□□ -0.82
CTCFL-221ENST00000608903 PYDC2Q56P42 97 aa9.94□□□□□ -0.82
CTCFL-221ENST00000608903 DOK3Q7L591 496 aa9.94□□□□□ -0.82
CTCFL-221ENST00000608903 COMMD2Q86X83 199 aa9.94□□□□□ -0.82
CTCFL-221ENST00000608903 GDPD1Q8N9F7 314 aa9.94□□□□□ -0.82
CTCFL-221ENST00000608903 DTX3Q8N9I9 347 aa9.94□□□□□ -0.82
CTCFL-221ENST00000608903 DMRTB1Q96MA1 342 aa9.94□□□□□ -0.82
CTCFL-221ENST00000608903 TMEM246Q9BRR3 403 aa9.94□□□□□ -0.82
CTCFL-221ENST00000608903 SLA2Q9H6Q3 261 aa9.94□□□□□ -0.82
CTCFL-221ENST00000608903 TAS2R4Q9NYW5 299 aa9.94□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 51 ms