RNA–Protein interactions for RNA: ENST00000605166.1

HMGB1P51-201, Transcript of high mobility group box 1 pseudogene 51, humanhuman

BASIC

Gene HMGB1P51, Length 638 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P51-201ENST00000605166 RERGQ96A58 199 aaPredicted RBP3.67□□□□□ -1.82
HMGB1P51-201ENST00000605166 ADTRPQ96IZ2 230 aa3.67□□□□□ -1.82
HMGB1P51-201ENST00000605166 CYTH2Q99418 400 aa3.67□□□□□ -1.82
HMGB1P51-201ENST00000605166 C20orf144Q9BQM9 153 aa3.67□□□□□ -1.82
HMGB1P51-201ENST00000605166 TMEM243Q9BU79 118 aa3.67□□□□□ -1.82
HMGB1P51-201ENST00000605166 EMC6Q9BV81 110 aa3.67□□□□□ -1.82
HMGB1P51-201ENST00000605166 BBS2Q9BXC9 721 aa3.67□□□□□ -1.82
HMGB1P51-201ENST00000605166 SLC25A39Q9BZJ4 359 aaPredicted RBP3.67□□□□□ -1.82
HMGB1P51-201ENST00000605166 WDR55Q9H6Y2 383 aaPredicted RBP3.67□□□□□ -1.82
HMGB1P51-201ENST00000605166 RHBDL2Q9NX52 303 aa3.67□□□□□ -1.82
HMGB1P51-201ENST00000605166 ENPP5Q9UJA9 477 aa3.67□□□□□ -1.82
HMGB1P51-201ENST00000605166 TFR2Q9UP52 801 aa3.67□□□□□ -1.82
HMGB1P51-201ENST00000605166 SLC7A11Q9UPY5 501 aa3.67□□□□□ -1.82
HMGB1P51-201ENST00000605166 AP3M1Q9Y2T2 418 aa3.67□□□□□ -1.82
HMGB1P51-201ENST00000605166 ZNFX1Q9P2E3 1918 aaKnown RBP3.67□□□□□ -1.82
HMGB1P51-201ENST00000605166 TRAV19A0A0A6YYK7 116 aa3.66□□□□□ -1.82
HMGB1P51-201ENST00000605166 FAM240AA0A1B0GVK7 77 aa3.66□□□□□ -1.82
HMGB1P51-201ENST00000605166 TRPC5OSA6NMA1 111 aa3.66□□□□□ -1.82
HMGB1P51-201ENST00000605166 KLLNB2CW77 178 aa3.66□□□□□ -1.82
HMGB1P51-201ENST00000605166 C11orf94C9JXX5 98 aa3.66□□□□□ -1.82
HMGB1P51-201ENST00000605166 MYL12BO14950 172 aa3.66□□□□□ -1.82
HMGB1P51-201ENST00000605166 B4GALT5O43286 388 aa3.66□□□□□ -1.82
HMGB1P51-201ENST00000605166 SNAI2O43623 268 aa3.66□□□□□ -1.82
HMGB1P51-201ENST00000605166 REM1O75628 298 aa3.66□□□□□ -1.82
HMGB1P51-201ENST00000605166 LDOC1O95751 146 aaPredicted RBP3.66□□□□□ -1.82
HMGB1P51-201ENST00000605166 KRTAP1-4P0C5Y4 121 aa3.66□□□□□ -1.82
HMGB1P51-201ENST00000605166 RPS9P46781 194 aaKnown RBP3.66□□□□□ -1.82
HMGB1P51-201ENST00000605166 OR2B6P58173 313 aa3.66□□□□□ -1.82
HMGB1P51-201ENST00000605166 MTPNP58546 118 aa3.66□□□□□ -1.82
HMGB1P51-201ENST00000605166 CRADDP78560 199 aa3.66□□□□□ -1.82
HMGB1P51-201ENST00000605166 IFITM3Q01628 133 aa3.66□□□□□ -1.82
HMGB1P51-201ENST00000605166 RESP18Q5W5W9 173 aa3.66□□□□□ -1.82
HMGB1P51-201ENST00000605166 TMEM205Q6UW68 189 aa3.66□□□□□ -1.82
HMGB1P51-201ENST00000605166 SETD3Q86TU7 594 aaPredicted RBP3.66□□□□□ -1.82
HMGB1P51-201ENST00000605166 SLC7A5P1Q8MH63 180 aa3.66□□□□□ -1.82
HMGB1P51-201ENST00000605166 RXFP4Q8TDU9 374 aa3.66□□□□□ -1.82
HMGB1P51-201ENST00000605166 CCDC12Q8WUD4 166 aaPredicted RBP3.66□□□□□ -1.82
HMGB1P51-201ENST00000605166 RNF138Q8WVD3 245 aa3.66□□□□□ -1.82
HMGB1P51-201ENST00000605166 GTF2H4Q92759 462 aa3.66□□□□□ -1.82
HMGB1P51-201ENST00000605166 ZNF75AQ96N20 296 aa3.66□□□□□ -1.82
HMGB1P51-201ENST00000605166 ZIM3Q96PE6 472 aa3.66□□□□□ -1.82
HMGB1P51-201ENST00000605166 PDCD1LG2Q9BQ51 273 aa3.66□□□□□ -1.82
HMGB1P51-201ENST00000605166 COA1Q9GZY4 146 aa3.66□□□□□ -1.82
HMGB1P51-201ENST00000605166 PRORYQ9H606 182 aa3.66□□□□□ -1.82
HMGB1P51-201ENST00000605166 ASB8Q9H765 288 aa3.66□□□□□ -1.82
HMGB1P51-201ENST00000605166 ACOT13Q9NPJ3 140 aa3.66□□□□□ -1.82
HMGB1P51-201ENST00000605166 MAT2BQ9NZL9 334 aa3.66□□□□□ -1.82
HMGB1P51-201ENST00000605166 STX18Q9P2W9 335 aaKnown RBP3.66□□□□□ -1.82
HMGB1P51-201ENST00000605166 NDRG2Q9UN36 371 aaKnown RBP3.66□□□□□ -1.82
HMGB1P51-201ENST00000605166 TSSC4Q9Y5U2 329 aaPredicted RBP3.66□□□□□ -1.82
HMGB1P51-201ENST00000605166 WIF1Q9Y5W5 379 aa3.66□□□□□ -1.82
HMGB1P51-201ENST00000605166 ADAMTS13Q76LX8 1427 aa3.65□□□□□ -1.83
HMGB1P51-201ENST00000605166 TNFRSF11BO00300 401 aa3.65□□□□□ -1.83
HMGB1P51-201ENST00000605166 PLPP3O14495 311 aa3.65□□□□□ -1.83
HMGB1P51-201ENST00000605166 PSPHP1O15172 72 aa3.65□□□□□ -1.83
HMGB1P51-201ENST00000605166 TRBV12-3P01733 135 aa3.65□□□□□ -1.83
HMGB1P51-201ENST00000605166 MMP7P09237 267 aaPredicted RBP3.65□□□□□ -1.83
HMGB1P51-201ENST00000605166 PCK1P35558 622 aa3.65□□□□□ -1.83
HMGB1P51-201ENST00000605166 POLR2IP36954 125 aaKnown RBP3.65□□□□□ -1.83
HMGB1P51-201ENST00000605166 MNAT1P51948 309 aa3.65□□□□□ -1.83
HMGB1P51-201ENST00000605166 UBE2KP61086 200 aa3.65□□□□□ -1.83
HMGB1P51-201ENST00000605166 CKAP4Q07065 602 aaKnown RBP3.65□□□□□ -1.83
HMGB1P51-201ENST00000605166 INCA1Q0VD86 236 aa3.65□□□□□ -1.83
HMGB1P51-201ENST00000605166 SYCP1Q15431 976 aa3.65□□□□□ -1.83
HMGB1P51-201ENST00000605166 FAM19A1Q7Z5A9 133 aa3.65□□□□□ -1.83
HMGB1P51-201ENST00000605166 ERO1BQ86YB8 467 aa3.65□□□□□ -1.83
HMGB1P51-201ENST00000605166 NELFCDQ8IXH7 590 aa3.65□□□□□ -1.83
HMGB1P51-201ENST00000605166 OR2Y1Q8NGV0 311 aa3.65□□□□□ -1.83
HMGB1P51-201ENST00000605166 OR1S1Q8NH92 325 aa3.65□□□□□ -1.83
HMGB1P51-201ENST00000605166 ZNF799Q96GE5 643 aa3.65□□□□□ -1.83
HMGB1P51-201ENST00000605166 SMARCD1Q96GM5 515 aa3.65□□□□□ -1.83
HMGB1P51-201ENST00000605166 ZFP3Q96NJ6 502 aa3.65□□□□□ -1.83
HMGB1P51-201ENST00000605166 SERPINB11Q96P15 392 aa3.65□□□□□ -1.83
HMGB1P51-201ENST00000605166 SFXN3Q9BWM7 321 aa3.65□□□□□ -1.83
HMGB1P51-201ENST00000605166 BEX2Q9BXY8 128 aa3.65□□□□□ -1.83
HMGB1P51-201ENST00000605166 TPK1Q9H3S4 243 aa3.65□□□□□ -1.83
HMGB1P51-201ENST00000605166 HMG20AQ9NP66 347 aa3.65□□□□□ -1.83
HMGB1P51-201ENST00000605166 ZNF331Q9NQX6 463 aaPredicted RBP3.65□□□□□ -1.83
HMGB1P51-201ENST00000605166 DDX19AQ9NUU7 478 aaKnown RBP3.65□□□□□ -1.83
HMGB1P51-201ENST00000605166 MS4A12Q9NXJ0 267 aa3.65□□□□□ -1.83
HMGB1P51-201ENST00000605166 CYB5R1Q9UHQ9 305 aa3.65□□□□□ -1.83
HMGB1P51-201ENST00000605166 RAB23Q9ULC3 237 aa3.65□□□□□ -1.83
HMGB1P51-201ENST00000605166 NEU3Q9UQ49 428 aa3.65□□□□□ -1.83
HMGB1P51-201ENST00000605166 SIGLEC7Q9Y286 467 aa3.65□□□□□ -1.83
HMGB1P51-201ENST00000605166 NOSIPQ9Y314 301 aaKnown RBP3.65□□□□□ -1.83
HMGB1P51-201ENST00000605166 IGKV1-27A0A075B6S5 117 aa3.64□□□□□ -1.83
HMGB1P51-201ENST00000605166 IGHV1OR15-9A0A0B4J2B8 117 aa3.64□□□□□ -1.83
HMGB1P51-201ENST00000605166 A0A0U1RQV1 116 aa3.64□□□□□ -1.83
HMGB1P51-201ENST00000605166 SLC5A10A0PJK1 596 aa3.64□□□□□ -1.83
HMGB1P51-201ENST00000605166 KRBOX1C9JBD0 128 aa3.64□□□□□ -1.83
HMGB1P51-201ENST00000605166 RAD51BO15315 384 aa3.64□□□□□ -1.83
HMGB1P51-201ENST00000605166 SCN2BO60939 215 aa3.64□□□□□ -1.83
HMGB1P51-201ENST00000605166 GCM2O75603 506 aaPredicted RBP3.64□□□□□ -1.83
HMGB1P51-201ENST00000605166 CD8AP01732 235 aa3.64□□□□□ -1.83
HMGB1P51-201ENST00000605166 PGAM1P18669 254 aa3.64□□□□□ -1.83
HMGB1P51-201ENST00000605166 APLNRP35414 380 aa3.64□□□□□ -1.83
HMGB1P51-201ENST00000605166 OR12D2P58182 307 aa3.64□□□□□ -1.83
HMGB1P51-201ENST00000605166 CDK5Q00535 292 aa3.64□□□□□ -1.83
HMGB1P51-201ENST00000605166 CYP24A1Q07973 514 aa3.64□□□□□ -1.83
HMGB1P51-201ENST00000605166 PPIDQ08752 370 aaKnown RBP3.64□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms