RNA–Protein interactions for RNA: ENST00000594948.5

VRK3-209, Transcript of vaccinia related kinase 3, humanhuman

APPRIS P3 TSL 2 BASIC

Gene VRK3, Length 1,847 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-209ENST00000594948 HKR1P10072 659 aa11.7□□□□□ -0.54
VRK3-209ENST00000594948 SPP1P10451 314 aa11.7□□□□□ -0.54
VRK3-209ENST00000594948 P2RY4P51582 365 aa11.7□□□□□ -0.54
VRK3-209ENST00000594948 F2RL1P55085 397 aa11.7□□□□□ -0.54
VRK3-209ENST00000594948 ARFRP1Q13795 201 aa11.7□□□□□ -0.54
VRK3-209ENST00000594948 PEA15Q15121 130 aa11.7□□□□□ -0.54
VRK3-209ENST00000594948 C14orf28Q4W4Y0 310 aa11.7□□□□□ -0.54
VRK3-209ENST00000594948 SLC25A47Q6Q0C1 308 aa11.7□□□□□ -0.54
VRK3-209ENST00000594948 OPN5Q6U736 354 aa11.7□□□□□ -0.54
VRK3-209ENST00000594948 RTN4RL2Q86UN3 420 aa11.7□□□□□ -0.54
VRK3-209ENST00000594948 COMMD1Q8N668 190 aa11.7□□□□□ -0.54
VRK3-209ENST00000594948 LYPD6BQ8NI32 183 aa11.7□□□□□ -0.54
VRK3-209ENST00000594948 ROBO4Q8WZ75 1007 aa11.7□□□□□ -0.54
VRK3-209ENST00000594948 ARHGAP5-AS1Q96IT6 56 aa11.7□□□□□ -0.54
VRK3-209ENST00000594948 MRGPRX4Q96LA9 322 aa11.7□□□□□ -0.54
VRK3-209ENST00000594948 CHRDQ9H2X0 955 aa11.7□□□□□ -0.54
VRK3-209ENST00000594948 C1orf123Q9NWV4 160 aa11.7□□□□□ -0.54
VRK3-209ENST00000594948 SEMA5BQ9P283 1151 aa11.7□□□□□ -0.54
VRK3-209ENST00000594948 B3GAT1Q9P2W7 334 aa11.7□□□□□ -0.54
VRK3-209ENST00000594948 SUSD2Q9UGT4 822 aa11.7□□□□□ -0.54
VRK3-209ENST00000594948 KPTNQ9Y664 436 aa11.7□□□□□ -0.54
VRK3-209ENST00000594948 A0A1B0GX78 115 aa11.69□□□□□ -0.54
VRK3-209ENST00000594948 EPOPA6NHQ4 379 aa11.69□□□□□ -0.54
VRK3-209ENST00000594948 COLCA2A8K830 154 aa11.69□□□□□ -0.54
VRK3-209ENST00000594948 SERPINE3A8MV23 424 aa11.69□□□□□ -0.54
VRK3-209ENST00000594948 RRP8O43159 456 aaKnown RBP11.69□□□□□ -0.54
VRK3-209ENST00000594948 MED6O75586 246 aa11.69□□□□□ -0.54
VRK3-209ENST00000594948 JTBO76095 146 aa11.69□□□□□ -0.54
VRK3-209ENST00000594948 IGHG1P01857 330 aa11.69□□□□□ -0.54
VRK3-209ENST00000594948 HCKP08631 526 aa11.69□□□□□ -0.54
VRK3-209ENST00000594948 SFTA3P0C7M3 94 aa11.69□□□□□ -0.54
VRK3-209ENST00000594948 PGA4P0DJD7 388 aa11.69□□□□□ -0.54
VRK3-209ENST00000594948 PGA3P0DJD8 388 aa11.69□□□□□ -0.54
VRK3-209ENST00000594948 CTSSP25774 331 aa11.69□□□□□ -0.54
VRK3-209ENST00000594948 LPAR6P43657 344 aa11.69□□□□□ -0.54
VRK3-209ENST00000594948 ARL4DP49703 201 aa11.69□□□□□ -0.54
VRK3-209ENST00000594948 DVL1P1P54792 670 aaPredicted RBP11.69□□□□□ -0.54
VRK3-209ENST00000594948 CLRN1P58418 232 aa11.69□□□□□ -0.54
VRK3-209ENST00000594948 GRB2P62993 217 aaKnown RBP11.69□□□□□ -0.54
VRK3-209ENST00000594948 FOXF1Q12946 379 aa11.69□□□□□ -0.54
VRK3-209ENST00000594948 ZNF239Q16600 458 aaKnown RBP11.69□□□□□ -0.54
VRK3-209ENST00000594948 RNF212Q495C1 297 aa11.69□□□□□ -0.54
VRK3-209ENST00000594948 ABHD12BQ7Z5M8 362 aaPredicted RBP11.69□□□□□ -0.54
VRK3-209ENST00000594948 TMEM200AQ86VY9 491 aa11.69□□□□□ -0.54
VRK3-209ENST00000594948 UEVLDQ8IX04 471 aa11.69□□□□□ -0.54
VRK3-209ENST00000594948 D2HGDHQ8N465 521 aa11.69□□□□□ -0.54
VRK3-209ENST00000594948 PNLDC1Q8NA58 520 aaKnown RBP11.69□□□□□ -0.54
VRK3-209ENST00000594948 LILRB1Q8NHL6 650 aaPredicted RBP11.69□□□□□ -0.54
VRK3-209ENST00000594948 SFT2D1Q8WV19 159 aa11.69□□□□□ -0.54
VRK3-209ENST00000594948 USB1Q9BQ65 265 aaKnown RBP11.69□□□□□ -0.54
VRK3-209ENST00000594948 TM2D1Q9BX74 207 aa11.69□□□□□ -0.54
VRK3-209ENST00000594948 CNTNAP3Q9BZ76 1288 aa11.69□□□□□ -0.54
VRK3-209ENST00000594948 HRH4Q9H3N8 390 aa11.69□□□□□ -0.54
VRK3-209ENST00000594948 TMEM231Q9H6L2 316 aa11.69□□□□□ -0.54
VRK3-209ENST00000594948 GPR84Q9NQS5 396 aa11.69□□□□□ -0.54
VRK3-209ENST00000594948 SLC22A11Q9NSA0 550 aa11.69□□□□□ -0.54
VRK3-209ENST00000594948 TUBD1Q9UJT1 453 aa11.69□□□□□ -0.54
VRK3-209ENST00000594948 C14orf166Q9Y224 244 aaKnown RBP11.69□□□□□ -0.54
VRK3-209ENST00000594948 SLCO1B1Q9Y6L6 691 aa11.69□□□□□ -0.54
VRK3-209ENST00000594948 TRANK1O15050 2925 aa11.68□□□□□ -0.54
VRK3-209ENST00000594948 IGLV3-32A0A0A0MS00 114 aa11.68□□□□□ -0.54
VRK3-209ENST00000594948 A0A1W2PR77 199 aa11.68□□□□□ -0.54
VRK3-209ENST00000594948 FAM157AC9JC47 383 aa11.68□□□□□ -0.54
VRK3-209ENST00000594948 PRSS44E7EML9 344 aa11.68□□□□□ -0.54
VRK3-209ENST00000594948 LRP3O75074 770 aa11.68□□□□□ -0.54
VRK3-209ENST00000594948 F12P00748 615 aaPredicted RBP11.68□□□□□ -0.54
VRK3-209ENST00000594948 IGLV3-1P01715 115 aa11.68□□□□□ -0.54
VRK3-209ENST00000594948 SNU13P55769 128 aaKnown RBP11.68□□□□□ -0.54
VRK3-209ENST00000594948 ZNF121P58317 390 aaPredicted RBP11.68□□□□□ -0.54
VRK3-209ENST00000594948 RAB5BP61020 215 aa11.68□□□□□ -0.54
VRK3-209ENST00000594948 CSNK2A1P68400 391 aaPredicted RBP11.68□□□□□ -0.54
VRK3-209ENST00000594948 GABREP78334 506 aa11.68□□□□□ -0.54
VRK3-209ENST00000594948 FAM3AP98173 230 aa11.68□□□□□ -0.54
VRK3-209ENST00000594948 ECH1Q13011 328 aa11.68□□□□□ -0.54
VRK3-209ENST00000594948 RPL7L1Q6DKI1 246 aaKnown RBP11.68□□□□□ -0.54
VRK3-209ENST00000594948 CCDC54Q8NEL0 328 aa11.68□□□□□ -0.54
VRK3-209ENST00000594948 CSNK2A3Q8NEV1 391 aa11.68□□□□□ -0.54
VRK3-209ENST00000594948 OR14K1Q8NGZ2 314 aa11.68□□□□□ -0.54
VRK3-209ENST00000594948 OR51F2Q8NH61 342 aa11.68□□□□□ -0.54
VRK3-209ENST00000594948 SLC39A7Q92504 469 aa11.68□□□□□ -0.54
VRK3-209ENST00000594948 TGIF2Q9GZN2 237 aa11.68□□□□□ -0.54
VRK3-209ENST00000594948 BANF2Q9H503 90 aa11.68□□□□□ -0.54
VRK3-209ENST00000594948 OR2S2Q9NQN1 319 aa11.68□□□□□ -0.54
VRK3-209ENST00000594948 POLR1DQ9Y2S0 133 aa11.68□□□□□ -0.54
VRK3-209ENST00000594948 FAM96BQ9Y3D0 163 aa11.68□□□□□ -0.54
VRK3-209ENST00000594948 TIMM10BQ9Y5J6 103 aa11.68□□□□□ -0.54
VRK3-209ENST00000594948 PMS2P1A4D2B8 440 aa11.67□□□□□ -0.54
VRK3-209ENST00000594948 RHPN2P1A8MT19 583 aa11.67□□□□□ -0.54
VRK3-209ENST00000594948 CRTAPO75718 401 aaPredicted RBP11.67□□□□□ -0.54
VRK3-209ENST00000594948 FARS2O95363 451 aaKnown RBP11.67□□□□□ -0.54
VRK3-209ENST00000594948 NAT2P11245 290 aa11.67□□□□□ -0.54
VRK3-209ENST00000594948 ZNF708P17019 499 aa11.67□□□□□ -0.54
VRK3-209ENST00000594948 ZNF17P17021 662 aa11.67□□□□□ -0.54
VRK3-209ENST00000594948 THBS4P35443 961 aa11.67□□□□□ -0.54
VRK3-209ENST00000594948 SMCO1Q147U7 214 aa11.67□□□□□ -0.54
VRK3-209ENST00000594948 FAM76BQ5HYJ3 339 aa11.67□□□□□ -0.54
VRK3-209ENST00000594948 Q6ZSR3 168 aa11.67□□□□□ -0.54
VRK3-209ENST00000594948 RNF144BQ7Z419 303 aa11.67□□□□□ -0.54
VRK3-209ENST00000594948 BHLHE23Q8NDY6 225 aa11.67□□□□□ -0.54
VRK3-209ENST00000594948 OR6X1Q8NH79 312 aa11.67□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms