RNA–Protein interactions for RNA: ENST00000593597.1

USE1-203, Transcript of unconventional SNARE in the ER 1, humanhuman

TSL 2

Gene USE1, Length 587 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USE1-203ENST00000593597 C16orf95Q9H693 158 aa8.74□□□□□ -1.01
USE1-203ENST00000593597 CNTD2Q9H8S5 307 aa8.74□□□□□ -1.01
USE1-203ENST00000593597 MED20Q9H944 212 aa8.74□□□□□ -1.01
USE1-203ENST00000593597 RNPEPL1Q9HAU8 725 aa8.74□□□□□ -1.01
USE1-203ENST00000593597 TRIM36Q9NQ86 728 aa8.74□□□□□ -1.01
USE1-203ENST00000593597 TBC1D23Q9NUY8 699 aa8.74□□□□□ -1.01
USE1-203ENST00000593597 ARL8BQ9NVJ2 186 aa8.74□□□□□ -1.01
USE1-203ENST00000593597 DNAJB11Q9UBS4 358 aa8.74□□□□□ -1.01
USE1-203ENST00000593597 PRPF19Q9UMS4 504 aaKnown RBP8.74□□□□□ -1.01
USE1-203ENST00000593597 NOP16Q9Y3C1 178 aaKnown RBP8.74□□□□□ -1.01
USE1-203ENST00000593597 RHBDD3Q9Y3P4 386 aa8.74□□□□□ -1.01
USE1-203ENST00000593597 KPTNQ9Y664 436 aa8.74□□□□□ -1.01
USE1-203ENST00000593597 KMT2CQ8NEZ4 4911 aaKnown RBP8.73□□□□□ -1.01
USE1-203ENST00000593597 A0A0G2JK05 382 aa8.73□□□□□ -1.01
USE1-203ENST00000593597 SLC22A31A6NKX4 558 aa8.73□□□□□ -1.01
USE1-203ENST00000593597 FAM183AA6NL82 134 aa8.73□□□□□ -1.01
USE1-203ENST00000593597 M0QZ24 198 aa8.73□□□□□ -1.01
USE1-203ENST00000593597 TNFRSF11BO00300 401 aa8.73□□□□□ -1.01
USE1-203ENST00000593597 TBX1O43435 398 aa8.73□□□□□ -1.01
USE1-203ENST00000593597 SNX3O60493 162 aa8.73□□□□□ -1.01
USE1-203ENST00000593597 ECDO95905 644 aaPredicted RBP8.73□□□□□ -1.01
USE1-203ENST00000593597 GSK3AP49840 483 aa8.73□□□□□ -1.01
USE1-203ENST00000593597 ZNF121P58317 390 aaPredicted RBP8.73□□□□□ -1.01
USE1-203ENST00000593597 IKZF1Q13422 519 aa8.73□□□□□ -1.01
USE1-203ENST00000593597 DGUOKQ16854 277 aa8.73□□□□□ -1.01
USE1-203ENST00000593597 METAP1DQ6UB28 335 aaPredicted RBP8.73□□□□□ -1.01
USE1-203ENST00000593597 CYP2R1Q6VVX0 501 aa8.73□□□□□ -1.01
USE1-203ENST00000593597 FAM57BQ71RH2 274 aa8.73□□□□□ -1.01
USE1-203ENST00000593597 DPY19L4Q7Z388 723 aa8.73□□□□□ -1.01
USE1-203ENST00000593597 SPERTQ8NA61 448 aa8.73□□□□□ -1.01
USE1-203ENST00000593597 AQP11Q8NBQ7 271 aa8.73□□□□□ -1.01
USE1-203ENST00000593597 SCCPDHQ8NBX0 429 aa8.73□□□□□ -1.01
USE1-203ENST00000593597 OR52L1Q8NGH7 329 aa8.73□□□□□ -1.01
USE1-203ENST00000593597 C8orf46Q8TAG6 207 aa8.73□□□□□ -1.01
USE1-203ENST00000593597 RNF133Q8WVZ7 376 aa8.73□□□□□ -1.01
USE1-203ENST00000593597 HPSE2Q8WWQ2 592 aa8.73□□□□□ -1.01
USE1-203ENST00000593597 REEP6Q96HR9 211 aa8.73□□□□□ -1.01
USE1-203ENST00000593597 LYZL4Q96KX0 146 aa8.73□□□□□ -1.01
USE1-203ENST00000593597 GAFA1Q96PS6 74 aa8.73□□□□□ -1.01
USE1-203ENST00000593597 CDRT15Q96T59 188 aa8.73□□□□□ -1.01
USE1-203ENST00000593597 DCTN5Q9BTE1 182 aa8.73□□□□□ -1.01
USE1-203ENST00000593597 ABHD6Q9BV23 337 aa8.73□□□□□ -1.01
USE1-203ENST00000593597 TSSK6Q9BXA6 273 aa8.73□□□□□ -1.01
USE1-203ENST00000593597 ELL3Q9HB65 397 aaPredicted RBP8.73□□□□□ -1.01
USE1-203ENST00000593597 SNTG1Q9NSN8 517 aa8.73□□□□□ -1.01
USE1-203ENST00000593597 DNAJC27Q9NZQ0 273 aa8.73□□□□□ -1.01
USE1-203ENST00000593597 ONECUT1Q9UBC0 465 aa8.73□□□□□ -1.01
USE1-203ENST00000593597 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP8.72□□□□□ -1.01
USE1-203ENST00000593597 ANKRD30BLA7E2S9 258 aa8.72□□□□□ -1.01
USE1-203ENST00000593597 CDIPTO14735 213 aa8.72□□□□□ -1.01
USE1-203ENST00000593597 TIMM23O14925 209 aa8.72□□□□□ -1.01
USE1-203ENST00000593597 NPFFO15130 113 aa8.72□□□□□ -1.01
USE1-203ENST00000593597 TSPAN9O75954 239 aa8.72□□□□□ -1.01
USE1-203ENST00000593597 ANXA2P07355 339 aaKnown RBP8.72□□□□□ -1.01
USE1-203ENST00000593597 MUC1P15941 1255 aaPredicted RBP8.72□□□□□ -1.01
USE1-203ENST00000593597 PAX6P26367 422 aa8.72□□□□□ -1.01
USE1-203ENST00000593597 FMO3P31513 532 aa8.72□□□□□ -1.01
USE1-203ENST00000593597 DCTDP32321 178 aa8.72□□□□□ -1.01
USE1-203ENST00000593597 IFNGR2P38484 337 aa8.72□□□□□ -1.01
USE1-203ENST00000593597 OPRL1P41146 370 aa8.72□□□□□ -1.01
USE1-203ENST00000593597 GMFBP60983 142 aa8.72□□□□□ -1.01
USE1-203ENST00000593597 EIF2B1Q14232 305 aaKnown RBP8.72□□□□□ -1.01
USE1-203ENST00000593597 C11orf91Q3C1V1 193 aa8.72□□□□□ -1.01
USE1-203ENST00000593597 SAMD4BQ5PRF9 694 aaKnown RBP8.72□□□□□ -1.01
USE1-203ENST00000593597 RPL13AP3Q6NVV1 102 aa8.72□□□□□ -1.01
USE1-203ENST00000593597 ZNF788Q6ZQV5 615 aa8.72□□□□□ -1.01
USE1-203ENST00000593597 TIGD4Q8IY51 512 aa8.72□□□□□ -1.01
USE1-203ENST00000593597 IQCF1Q8N6M8 205 aa8.72□□□□□ -1.01
USE1-203ENST00000593597 OR6K6Q8NGW6 343 aa8.72□□□□□ -1.01
USE1-203ENST00000593597 OR8S1Q8NH09 359 aa8.72□□□□□ -1.01
USE1-203ENST00000593597 PPP1R35Q8TAP8 253 aa8.72□□□□□ -1.01
USE1-203ENST00000593597 RPL3LQ92901 407 aaKnown RBP8.72□□□□□ -1.01
USE1-203ENST00000593597 MCUR1Q96AQ8 359 aa8.72□□□□□ -1.01
USE1-203ENST00000593597 RAB3IPQ96QF0 476 aaPredicted RBP8.72□□□□□ -1.01
USE1-203ENST00000593597 NIPSNAP1Q9BPW8 284 aa8.72□□□□□ -1.01
USE1-203ENST00000593597 OPA3Q9H6K4 179 aa8.72□□□□□ -1.01
USE1-203ENST00000593597 C14orf119Q9NWQ9 140 aa8.72□□□□□ -1.01
USE1-203ENST00000593597 TAS2R1Q9NYW7 299 aa8.72□□□□□ -1.01
USE1-203ENST00000593597 KIF17Q9P2E2 1029 aa8.72□□□□□ -1.01
USE1-203ENST00000593597 VPREB3Q9UKI3 123 aa8.72□□□□□ -1.01
USE1-203ENST00000593597 KLHDC2Q9Y2U9 406 aa8.72□□□□□ -1.01
USE1-203ENST00000593597 SIGLEC9Q9Y336 463 aa8.72□□□□□ -1.01
USE1-203ENST00000593597 COL7A1Q02388 2944 aa8.71□□□□□ -1.01
USE1-203ENST00000593597 DNAH9Q9NYC9 4486 aa8.71□□□□□ -1.01
USE1-203ENST00000593597 ZNF816-ZNF321PA0A0X1KG74 233 aa8.71□□□□□ -1.02
USE1-203ENST00000593597 A0A1B0GVI7 797 aa8.71□□□□□ -1.02
USE1-203ENST00000593597 CCNB2O95067 398 aa8.71□□□□□ -1.02
USE1-203ENST00000593597 SAA4P35542 130 aa8.71□□□□□ -1.02
USE1-203ENST00000593597 DDOSTP39656 456 aa8.71□□□□□ -1.02
USE1-203ENST00000593597 GRB2P62993 217 aaKnown RBP8.71□□□□□ -1.02
USE1-203ENST00000593597 EGR3Q06889 387 aa8.71□□□□□ -1.02
USE1-203ENST00000593597 TIGD6Q17RP2 521 aa8.71□□□□□ -1.02
USE1-203ENST00000593597 MICBQ29980 383 aa8.71□□□□□ -1.02
USE1-203ENST00000593597 GFOD2Q3B7J2 385 aa8.71□□□□□ -1.02
USE1-203ENST00000593597 ATPAF1Q5TC12 328 aaPredicted RBP8.71□□□□□ -1.02
USE1-203ENST00000593597 CRIP3Q6Q6R5 217 aa8.71□□□□□ -1.02
USE1-203ENST00000593597 GDPGP1Q6ZNW5 385 aa8.71□□□□□ -1.02
USE1-203ENST00000593597 ERI1Q8IV48 349 aaKnown RBP8.71□□□□□ -1.02
USE1-203ENST00000593597 DEFB107AQ8IZN7 70 aa8.71□□□□□ -1.02
USE1-203ENST00000593597 OR6N2Q8NGY6 317 aa8.71□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms