RNA–Protein interactions for RNA: ENST00000590630.5

LIG3-213, Transcript of DNA ligase 3, humanhuman

TSL 5

Gene LIG3, Length 904 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG3-213ENST00000590630 MPC1Q9Y5U8 109 aa10.03□□□□□ -0.8
LIG3-213ENST00000590630 JMJD1CQ15652 2540 aa10.03□□□□□ -0.8
LIG3-213ENST00000590630 IGHV3-64DA0A0J9YX35 117 aa10.02□□□□□ -0.81
LIG3-213ENST00000590630 DAPL1A0PJW8 107 aa10.02□□□□□ -0.81
LIG3-213ENST00000590630 ANXA2P2A6NMY6 339 aa10.02□□□□□ -0.81
LIG3-213ENST00000590630 INAFM1C9JVW0 142 aa10.02□□□□□ -0.81
LIG3-213ENST00000590630 H0YAE9 185 aa10.02□□□□□ -0.81
LIG3-213ENST00000590630 MTRF1O75570 445 aaKnown RBP10.02□□□□□ -0.81
LIG3-213ENST00000590630 RPP14O95059 124 aaKnown RBP10.02□□□□□ -0.81
LIG3-213ENST00000590630 FSTL3O95633 263 aa10.02□□□□□ -0.81
LIG3-213ENST00000590630 FADS2O95864 444 aaKnown RBP10.02□□□□□ -0.81
LIG3-213ENST00000590630 CST4P01036 141 aa10.02□□□□□ -0.81
LIG3-213ENST00000590630 IRF2P14316 349 aa10.02□□□□□ -0.81
LIG3-213ENST00000590630 ISL1P61371 349 aa10.02□□□□□ -0.81
LIG3-213ENST00000590630 ACTA2P62736 377 aa10.02□□□□□ -0.81
LIG3-213ENST00000590630 ACTG2P63267 376 aa10.02□□□□□ -0.81
LIG3-213ENST00000590630 IL5RAQ01344 420 aa10.02□□□□□ -0.81
LIG3-213ENST00000590630 ZNF85Q03923 595 aa10.02□□□□□ -0.81
LIG3-213ENST00000590630 SLC34A1Q06495 639 aa10.02□□□□□ -0.81
LIG3-213ENST00000590630 CDONQ4KMG0 1287 aa10.02□□□□□ -0.81
LIG3-213ENST00000590630 TMEM155Q4W5P6 130 aa10.02□□□□□ -0.81
LIG3-213ENST00000590630 ZBTB37Q5TC79 503 aa10.02□□□□□ -0.81
LIG3-213ENST00000590630 KRT74Q7RTS7 529 aa10.02□□□□□ -0.81
LIG3-213ENST00000590630 LRRC28Q86X40 367 aaPredicted RBP10.02□□□□□ -0.81
LIG3-213ENST00000590630 MUC20Q8N307 709 aaPredicted RBP10.02□□□□□ -0.81
LIG3-213ENST00000590630 SPICQ8N5J4 248 aa10.02□□□□□ -0.81
LIG3-213ENST00000590630 OR11L1Q8NGX0 322 aa10.02□□□□□ -0.81
LIG3-213ENST00000590630 ZNF420Q8TAQ5 688 aaPredicted RBP10.02□□□□□ -0.81
LIG3-213ENST00000590630 APH1BQ8WW43 257 aa10.02□□□□□ -0.81
LIG3-213ENST00000590630 DVL3Q92997 716 aaPredicted RBP10.02□□□□□ -0.81
LIG3-213ENST00000590630 LGALS12Q96DT0 336 aa10.02□□□□□ -0.81
LIG3-213ENST00000590630 ADI1Q9BV57 179 aa10.02□□□□□ -0.81
LIG3-213ENST00000590630 ZNF665Q9H7R5 613 aa10.02□□□□□ -0.81
LIG3-213ENST00000590630 RNPEPL1Q9HAU8 725 aa10.02□□□□□ -0.81
LIG3-213ENST00000590630 INPP5EQ9NRR6 644 aa10.02□□□□□ -0.81
LIG3-213ENST00000590630 MRPS18AQ9NVS2 196 aaKnown RBP10.02□□□□□ -0.81
LIG3-213ENST00000590630 TMEM160Q9NX00 188 aa10.02□□□□□ -0.81
LIG3-213ENST00000590630 NKX1-2Q9UD57 310 aaPredicted RBP10.02□□□□□ -0.81
LIG3-213ENST00000590630 GNG8Q9UK08 70 aa10.02□□□□□ -0.81
LIG3-213ENST00000590630 OR52A1Q9UKL2 312 aa10.02□□□□□ -0.81
LIG3-213ENST00000590630 RHBDD3Q9Y3P4 386 aa10.02□□□□□ -0.81
LIG3-213ENST00000590630 ZNF816-ZNF321PA0A0X1KG74 233 aa10.01□□□□□ -0.81
LIG3-213ENST00000590630 DHRS7CA6NNS2 312 aa10.01□□□□□ -0.81
LIG3-213ENST00000590630 FAM20BO75063 409 aa10.01□□□□□ -0.81
LIG3-213ENST00000590630 WBP4O75554 376 aaKnown RBP10.01□□□□□ -0.81
LIG3-213ENST00000590630 DHRS3O75911 302 aa10.01□□□□□ -0.81
LIG3-213ENST00000590630 CLIC3O95833 236 aa10.01□□□□□ -0.81
LIG3-213ENST00000590630 TGFAP01135 160 aa10.01□□□□□ -0.81
LIG3-213ENST00000590630 IGHV2-5P01817 119 aa10.01□□□□□ -0.81
LIG3-213ENST00000590630 IGHA1P01876 353 aa10.01□□□□□ -0.81
LIG3-213ENST00000590630 CAPGP40121 348 aa10.01□□□□□ -0.81
LIG3-213ENST00000590630 MDH2P40926 338 aaKnown RBP10.01□□□□□ -0.81
LIG3-213ENST00000590630 ADARB1P78563 741 aaKnown RBP10.01□□□□□ -0.81
LIG3-213ENST00000590630 RIPPLY1Q0D2K3 151 aa10.01□□□□□ -0.81
LIG3-213ENST00000590630 PRDX4Q13162 271 aa10.01□□□□□ -0.81
LIG3-213ENST00000590630 ZMYND11Q15326 602 aa10.01□□□□□ -0.81
LIG3-213ENST00000590630 MPPED2Q15777 294 aa10.01□□□□□ -0.81
LIG3-213ENST00000590630 KLHL22Q53GT1 634 aa10.01□□□□□ -0.81
LIG3-213ENST00000590630 PRAMEF6Q5VXH4 476 aa10.01□□□□□ -0.81
LIG3-213ENST00000590630 CATSPERDQ86XM0 798 aa10.01□□□□□ -0.81
LIG3-213ENST00000590630 EGFL6Q8IUX8 553 aa10.01□□□□□ -0.81
LIG3-213ENST00000590630 KLHL36Q8N4N3 616 aa10.01□□□□□ -0.81
LIG3-213ENST00000590630 SEMA6DQ8NFY4 1073 aa10.01□□□□□ -0.81
LIG3-213ENST00000590630 RORBQ92753 470 aa10.01□□□□□ -0.81
LIG3-213ENST00000590630 ITPKCQ96DU7 683 aa10.01□□□□□ -0.81
LIG3-213ENST00000590630 MICU1Q9BPX6 476 aa10.01□□□□□ -0.81
LIG3-213ENST00000590630 RTL8AQ9BWD3 113 aa10.01□□□□□ -0.81
LIG3-213ENST00000590630 AMBNQ9NP70 447 aa10.01□□□□□ -0.81
LIG3-213ENST00000590630 UFSP2Q9NUQ7 469 aa10.01□□□□□ -0.81
LIG3-213ENST00000590630 ACOXLQ9NUZ1 547 aa10.01□□□□□ -0.81
LIG3-213ENST00000590630 KCNS2Q9ULS6 477 aa10.01□□□□□ -0.81
LIG3-213ENST00000590630 HSPE1-MOB4S4R3N1 261 aa10.01□□□□□ -0.81
LIG3-213ENST00000590630 IRGMA1A4Y4 181 aa10□□□□□ -0.81
LIG3-213ENST00000590630 A6NLC8 198 aa10□□□□□ -0.81
LIG3-213ENST00000590630 ZNF850A8MQ14 1090 aa10□□□□□ -0.81
LIG3-213ENST00000590630 FAM157AC9JC47 383 aa10□□□□□ -0.81
LIG3-213ENST00000590630 H0YHG0 523 aa10□□□□□ -0.81
LIG3-213ENST00000590630 LMX1BO60663 402 aa10□□□□□ -0.81
LIG3-213ENST00000590630 CYB5R3P00387 301 aaPredicted RBP10□□□□□ -0.81
LIG3-213ENST00000590630 GRPP07492 148 aa10□□□□□ -0.81
LIG3-213ENST00000590630 MSMBP08118 114 aa10□□□□□ -0.81
LIG3-213ENST00000590630 PCMT1P22061 227 aa10□□□□□ -0.81
LIG3-213ENST00000590630 CCL1P22362 96 aa10□□□□□ -0.81
LIG3-213ENST00000590630 CPT2P23786 658 aa10□□□□□ -0.81
LIG3-213ENST00000590630 PMELP40967 661 aa10□□□□□ -0.81
LIG3-213ENST00000590630 DVL1P1P54792 670 aaPredicted RBP10□□□□□ -0.81
LIG3-213ENST00000590630 HNRNPA0Q13151 305 aaKnown RBP10□□□□□ -0.81
LIG3-213ENST00000590630 GALEQ14376 348 aa10□□□□□ -0.81
LIG3-213ENST00000590630 TP53I3Q53FA7 332 aa10□□□□□ -0.81
LIG3-213ENST00000590630 DOK3Q7L591 496 aa10□□□□□ -0.81
LIG3-213ENST00000590630 THAP5Q7Z6K1 395 aa10□□□□□ -0.81
LIG3-213ENST00000590630 ZDHHC23Q8IYP9 409 aa10□□□□□ -0.81
LIG3-213ENST00000590630 OR51F2Q8NH61 342 aa10□□□□□ -0.81
LIG3-213ENST00000590630 OR5P3Q8WZ94 311 aa10□□□□□ -0.81
LIG3-213ENST00000590630 PPP1R14AQ96A00 147 aa10□□□□□ -0.81
LIG3-213ENST00000590630 FAM71F1Q96KD3 344 aaPredicted RBP10□□□□□ -0.81
LIG3-213ENST00000590630 UBAP1Q9NZ09 502 aa10□□□□□ -0.81
LIG3-213ENST00000590630 RNF7Q9UBF6 113 aa10□□□□□ -0.81
LIG3-213ENST00000590630 ENPP5Q9UJA9 477 aa10□□□□□ -0.81
LIG3-213ENST00000590630 PCDHB10Q9UN67 800 aa10□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms