RNA–Protein interactions for RNA: ENST00000589823.6

VMP1-210, Transcript of vacuole membrane protein 1, humanhuman

TSL 3

Gene VMP1, Length 580 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-210ENST00000589823 H7C417 338 aa11.61□□□□□ -0.55
VMP1-210ENST00000589823 OVOL3O00110 214 aa11.61□□□□□ -0.55
VMP1-210ENST00000589823 TPD52L2O43399 206 aaKnown RBP11.61□□□□□ -0.55
VMP1-210ENST00000589823 GMDSO60547 372 aa11.61□□□□□ -0.55
VMP1-210ENST00000589823 LILRA1O75019 489 aa11.61□□□□□ -0.55
VMP1-210ENST00000589823 CST4P01036 141 aa11.61□□□□□ -0.55
VMP1-210ENST00000589823 CD2P06729 351 aa11.61□□□□□ -0.55
VMP1-210ENST00000589823 CPEP16870 476 aa11.61□□□□□ -0.55
VMP1-210ENST00000589823 FAHP16930 419 aa11.61□□□□□ -0.55
VMP1-210ENST00000589823 CA6P23280 308 aa11.61□□□□□ -0.55
VMP1-210ENST00000589823 TSTQ16762 297 aaKnown RBP11.61□□□□□ -0.55
VMP1-210ENST00000589823 PCGF3Q3KNV8 242 aa11.61□□□□□ -0.55
VMP1-210ENST00000589823 YIF1BQ5BJH7 314 aa11.61□□□□□ -0.55
VMP1-210ENST00000589823 Q6ZR03 302 aa11.61□□□□□ -0.55
VMP1-210ENST00000589823 MS4A15Q8N5U1 240 aa11.61□□□□□ -0.55
VMP1-210ENST00000589823 OR2Z1Q8NG97 314 aa11.61□□□□□ -0.55
VMP1-210ENST00000589823 OR51A4Q8NGJ6 313 aa11.61□□□□□ -0.55
VMP1-210ENST00000589823 IGFBPL1Q8WX77 278 aa11.61□□□□□ -0.55
VMP1-210ENST00000589823 PIGCQ92535 297 aa11.61□□□□□ -0.55
VMP1-210ENST00000589823 GTF3AQ92664 365 aaKnown RBP11.61□□□□□ -0.55
VMP1-210ENST00000589823 FGGYQ96C11 551 aa11.61□□□□□ -0.55
VMP1-210ENST00000589823 ELMOD3Q96FG2 381 aa11.61□□□□□ -0.55
VMP1-210ENST00000589823 HIST1H2AAQ96QV6 131 aa11.61□□□□□ -0.55
VMP1-210ENST00000589823 ADAT1Q9BUB4 502 aaKnown RBP11.61□□□□□ -0.55
VMP1-210ENST00000589823 TMED9Q9BVK6 235 aa11.61□□□□□ -0.55
VMP1-210ENST00000589823 MRPS26Q9BYN8 205 aaKnown RBP11.61□□□□□ -0.55
VMP1-210ENST00000589823 RHBDD3Q9Y3P4 386 aa11.61□□□□□ -0.55
VMP1-210ENST00000589823 MPC1Q9Y5U8 109 aa11.61□□□□□ -0.55
VMP1-210ENST00000589823 CELSR2Q9HCU4 2923 aa11.61□□□□□ -0.55
VMP1-210ENST00000589823 A6NIN4 97 aa11.6□□□□□ -0.55
VMP1-210ENST00000589823 ANXA2P2A6NMY6 339 aa11.6□□□□□ -0.55
VMP1-210ENST00000589823 ZNF850A8MQ14 1090 aa11.6□□□□□ -0.55
VMP1-210ENST00000589823 INMTO95050 263 aa11.6□□□□□ -0.55
VMP1-210ENST00000589823 SERPINA3P01011 423 aa11.6□□□□□ -0.55
VMP1-210ENST00000589823 IGHV1-46P01743 117 aa11.6□□□□□ -0.55
VMP1-210ENST00000589823 OCM2P0CE71 109 aa11.6□□□□□ -0.55
VMP1-210ENST00000589823 SOX2P48431 317 aa11.6□□□□□ -0.55
VMP1-210ENST00000589823 MZT1Q08AG7 82 aa11.6□□□□□ -0.55
VMP1-210ENST00000589823 PRDX4Q13162 271 aa11.6□□□□□ -0.55
VMP1-210ENST00000589823 TRAM1Q15629 374 aa11.6□□□□□ -0.55
VMP1-210ENST00000589823 FAM209AQ5JX71 171 aa11.6□□□□□ -0.55
VMP1-210ENST00000589823 CLVS2Q5SYC1 327 aa11.6□□□□□ -0.55
VMP1-210ENST00000589823 PHC2Q8IXK0 858 aa11.6□□□□□ -0.55
VMP1-210ENST00000589823 ZDHHC23Q8IYP9 409 aa11.6□□□□□ -0.55
VMP1-210ENST00000589823 ZCCHC24Q8N2G6 241 aaKnown RBP11.6□□□□□ -0.55
VMP1-210ENST00000589823 SPERTQ8NA61 448 aa11.6□□□□□ -0.55
VMP1-210ENST00000589823 OR8S1Q8NH09 359 aa11.6□□□□□ -0.55
VMP1-210ENST00000589823 PP6455Q8WZ26 134 aa11.6□□□□□ -0.55
VMP1-210ENST00000589823 RGP1Q92546 391 aaPredicted RBP11.6□□□□□ -0.55
VMP1-210ENST00000589823 THRSPQ92748 146 aa11.6□□□□□ -0.55
VMP1-210ENST00000589823 NINJ1Q92982 152 aa11.6□□□□□ -0.55
VMP1-210ENST00000589823 EGLN1Q9GZT9 426 aa11.6□□□□□ -0.55
VMP1-210ENST00000589823 ZNF275Q9NSD4 429 aaPredicted RBP11.6□□□□□ -0.55
VMP1-210ENST00000589823 DECR2Q9NUI1 292 aa11.6□□□□□ -0.55
VMP1-210ENST00000589823 NKIRAS2Q9NYR9 191 aa11.6□□□□□ -0.55
VMP1-210ENST00000589823 CENPEQ02224 2701 aa11.59□□□□□ -0.55
VMP1-210ENST00000589823 DSCAMO60469 2012 aa11.59□□□□□ -0.55
VMP1-210ENST00000589823 A0A1B0GWJ7 208 aa11.59□□□□□ -0.55
VMP1-210ENST00000589823 TRIM64CA6NLI5 447 aa11.59□□□□□ -0.55
VMP1-210ENST00000589823 H0YL77 283 aa11.59□□□□□ -0.55
VMP1-210ENST00000589823 CCRL2O00421 344 aa11.59□□□□□ -0.55
VMP1-210ENST00000589823 MLNRO43193 412 aa11.59□□□□□ -0.55
VMP1-210ENST00000589823 LMX1BO60663 402 aa11.59□□□□□ -0.55
VMP1-210ENST00000589823 GATBO75879 557 aaKnown RBP11.59□□□□□ -0.55
VMP1-210ENST00000589823 NRASP01111 189 aa11.59□□□□□ -0.55
VMP1-210ENST00000589823 HLA-DPB1P04440 258 aa11.59□□□□□ -0.55
VMP1-210ENST00000589823 ADH4P08319 380 aa11.59□□□□□ -0.55
VMP1-210ENST00000589823 PSMA1P25786 263 aaKnown RBP11.59□□□□□ -0.55
VMP1-210ENST00000589823 MAPK3P27361 379 aaPredicted RBP11.59□□□□□ -0.55
VMP1-210ENST00000589823 TNFAIP6P98066 277 aaPredicted RBP11.59□□□□□ -0.55
VMP1-210ENST00000589823 Q499Y3 187 aa11.59□□□□□ -0.55
VMP1-210ENST00000589823 SYT6Q5T7P8 510 aaPredicted RBP11.59□□□□□ -0.55
VMP1-210ENST00000589823 PLCXD3Q63HM9 321 aa11.59□□□□□ -0.55
VMP1-210ENST00000589823 MOB3CQ70IA8 216 aa11.59□□□□□ -0.55
VMP1-210ENST00000589823 KRT74Q7RTS7 529 aa11.59□□□□□ -0.55
VMP1-210ENST00000589823 CDH24Q86UP0 819 aa11.59□□□□□ -0.55
VMP1-210ENST00000589823 SERPINA12Q8IW75 414 aa11.59□□□□□ -0.55
VMP1-210ENST00000589823 OR10AD1Q8NGE0 317 aa11.59□□□□□ -0.55
VMP1-210ENST00000589823 OR13C5Q8NGS8 318 aa11.59□□□□□ -0.55
VMP1-210ENST00000589823 NEU4Q8WWR8 484 aaPredicted RBP11.59□□□□□ -0.55
VMP1-210ENST00000589823 MUL1Q969V5 352 aa11.59□□□□□ -0.55
VMP1-210ENST00000589823 SORCS2Q96PQ0 1159 aa11.59□□□□□ -0.55
VMP1-210ENST00000589823 MICU1Q9BPX6 476 aa11.59□□□□□ -0.55
VMP1-210ENST00000589823 BEX4Q9NWD9 120 aaPredicted RBP11.59□□□□□ -0.55
VMP1-210ENST00000589823 C14orf119Q9NWQ9 140 aa11.59□□□□□ -0.55
VMP1-210ENST00000589823 UNC79Q9P2D8 2635 aa11.59□□□□□ -0.55
VMP1-210ENST00000589823 FBN2P35556 2912 aa11.59□□□□□ -0.55
VMP1-210ENST00000589823 TRBV5-5A0A0J9YX44 114 aa11.58□□□□□ -0.56
VMP1-210ENST00000589823 ANKRD61A6NGH8 418 aa11.58□□□□□ -0.56
VMP1-210ENST00000589823 F5H5P2 479 aa11.58□□□□□ -0.56
VMP1-210ENST00000589823 CD55P08174 381 aa11.58□□□□□ -0.56
VMP1-210ENST00000589823 OCMP0CE72 109 aaPredicted RBP11.58□□□□□ -0.56
VMP1-210ENST00000589823 SMIM18P0DKX4 95 aa11.58□□□□□ -0.56
VMP1-210ENST00000589823 GABRA5P31644 462 aa11.58□□□□□ -0.56
VMP1-210ENST00000589823 MAGEB1P43366 347 aa11.58□□□□□ -0.56
VMP1-210ENST00000589823 SRP9P49458 86 aaKnown RBP11.58□□□□□ -0.56
VMP1-210ENST00000589823 GP2P55259 537 aaKnown RBP11.58□□□□□ -0.56
VMP1-210ENST00000589823 RPS25P62851 125 aaKnown RBP11.58□□□□□ -0.56
VMP1-210ENST00000589823 CCL8P80075 99 aa11.58□□□□□ -0.56
VMP1-210ENST00000589823 TMEM42Q69YG0 159 aa11.58□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms