RNA–Protein interactions for RNA: ENST00000588274.1

CLPTM1-208, Transcript of CLPTM1, transmembrane protein, humanhuman

TSL 2

Gene CLPTM1, Length 805 nt, Biotype retained intron, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPTM1-208ENST00000588274 KIR2DS4P43632 304 aa11.23□□□□□ -0.61
CLPTM1-208ENST00000588274 PRKXP51817 358 aa11.23□□□□□ -0.61
CLPTM1-208ENST00000588274 ACSM1Q08AH1 577 aa11.23□□□□□ -0.61
CLPTM1-208ENST00000588274 IKZF1Q13422 519 aa11.23□□□□□ -0.61
CLPTM1-208ENST00000588274 SLC35F1Q5T1Q4 408 aa11.23□□□□□ -0.61
CLPTM1-208ENST00000588274 PGBD2Q6P3X8 592 aa11.23□□□□□ -0.61
CLPTM1-208ENST00000588274 ZNF788Q6ZQV5 615 aa11.23□□□□□ -0.61
CLPTM1-208ENST00000588274 REC114Q7Z4M0 266 aa11.23□□□□□ -0.61
CLPTM1-208ENST00000588274 KLHDC1Q8N7A1 406 aa11.23□□□□□ -0.61
CLPTM1-208ENST00000588274 C11orf44Q8N8P7 122 aa11.23□□□□□ -0.61
CLPTM1-208ENST00000588274 ANGPTL6Q8NI99 470 aa11.23□□□□□ -0.61
CLPTM1-208ENST00000588274 PIFOQ8TCI5 191 aa11.23□□□□□ -0.61
CLPTM1-208ENST00000588274 SLAMF6Q96DU3 332 aa11.23□□□□□ -0.61
CLPTM1-208ENST00000588274 RAB3IPQ96QF0 476 aaPredicted RBP11.23□□□□□ -0.61
CLPTM1-208ENST00000588274 KCNJ15Q99712 375 aa11.23□□□□□ -0.61
CLPTM1-208ENST00000588274 HOPXQ9BPY8 73 aaPredicted RBP11.23□□□□□ -0.61
CLPTM1-208ENST00000588274 COPS4Q9BT78 406 aa11.23□□□□□ -0.61
CLPTM1-208ENST00000588274 NMNAT2Q9BZQ4 307 aa11.23□□□□□ -0.61
CLPTM1-208ENST00000588274 EGLN3Q9H6Z9 239 aa11.23□□□□□ -0.61
CLPTM1-208ENST00000588274 KRCC1Q9NPI7 259 aaPredicted RBP11.23□□□□□ -0.61
CLPTM1-208ENST00000588274 MEIOCA2RUB1 952 aa11.22□□□□□ -0.61
CLPTM1-208ENST00000588274 M0R1W7 72 aa11.22□□□□□ -0.61
CLPTM1-208ENST00000588274 CDIPTO14735 213 aa11.22□□□□□ -0.61
CLPTM1-208ENST00000588274 SASH3O75995 380 aa11.22□□□□□ -0.61
CLPTM1-208ENST00000588274 PAX6P26367 422 aa11.22□□□□□ -0.61
CLPTM1-208ENST00000588274 DCTDP32321 178 aa11.22□□□□□ -0.61
CLPTM1-208ENST00000588274 DDOSTP39656 456 aa11.22□□□□□ -0.61
CLPTM1-208ENST00000588274 OXLD1Q5BKU9 147 aa11.22□□□□□ -0.61
CLPTM1-208ENST00000588274 Q6ZTK2 550 aa11.22□□□□□ -0.61
CLPTM1-208ENST00000588274 SLC36A1Q7Z2H8 476 aa11.22□□□□□ -0.61
CLPTM1-208ENST00000588274 CMTM4Q8IZR5 234 aa11.22□□□□□ -0.61
CLPTM1-208ENST00000588274 OR5T2Q8NGG2 359 aa11.22□□□□□ -0.61
CLPTM1-208ENST00000588274 OR51L1Q8NGJ5 315 aa11.22□□□□□ -0.61
CLPTM1-208ENST00000588274 HPSE2Q8WWQ2 592 aa11.22□□□□□ -0.61
CLPTM1-208ENST00000588274 RORBQ92753 470 aa11.22□□□□□ -0.61
CLPTM1-208ENST00000588274 SGK3Q96BR1 496 aa11.22□□□□□ -0.61
CLPTM1-208ENST00000588274 KCTD14Q9BQ13 255 aaPredicted RBP11.22□□□□□ -0.61
CLPTM1-208ENST00000588274 DNTTIP1Q9H147 329 aa11.22□□□□□ -0.61
CLPTM1-208ENST00000588274 RANBP3Q9H6Z4 567 aaPredicted RBP11.22□□□□□ -0.61
CLPTM1-208ENST00000588274 ELL3Q9HB65 397 aaPredicted RBP11.22□□□□□ -0.61
CLPTM1-208ENST00000588274 AURKAIP1Q9NWT8 199 aaPredicted RBP11.22□□□□□ -0.61
CLPTM1-208ENST00000588274 HAO2Q9NYQ3 351 aa11.22□□□□□ -0.61
CLPTM1-208ENST00000588274 CD300AQ9UGN4 299 aa11.22□□□□□ -0.61
CLPTM1-208ENST00000588274 ZNF222Q9UK12 451 aa11.22□□□□□ -0.61
CLPTM1-208ENST00000588274 FAM32AQ9Y421 112 aaKnown RBP11.22□□□□□ -0.61
CLPTM1-208ENST00000588274 DHRS12A0PJE2 317 aa11.21□□□□□ -0.61
CLPTM1-208ENST00000588274 ANKRD61A6NGH8 418 aa11.21□□□□□ -0.61
CLPTM1-208ENST00000588274 ANKRD30BLA7E2S9 258 aa11.21□□□□□ -0.61
CLPTM1-208ENST00000588274 ZNF878C9JN71 531 aa11.21□□□□□ -0.61
CLPTM1-208ENST00000588274 SIGLEC5O15389 551 aa11.21□□□□□ -0.61
CLPTM1-208ENST00000588274 NDUFB3O43676 98 aa11.21□□□□□ -0.61
CLPTM1-208ENST00000588274 TIPRLO75663 272 aa11.21□□□□□ -0.61
CLPTM1-208ENST00000588274 GADD45GO95257 159 aa11.21□□□□□ -0.61
CLPTM1-208ENST00000588274 ZNF823P16415 610 aa11.21□□□□□ -0.61
CLPTM1-208ENST00000588274 EEF1B2P24534 225 aaKnown RBP11.21□□□□□ -0.61
CLPTM1-208ENST00000588274 ACKR3P25106 362 aa11.21□□□□□ -0.61
CLPTM1-208ENST00000588274 MZT1Q08AG7 82 aa11.21□□□□□ -0.61
CLPTM1-208ENST00000588274 TSPAN31Q12999 210 aa11.21□□□□□ -0.61
CLPTM1-208ENST00000588274 TEX30Q5JUR7 227 aa11.21□□□□□ -0.61
CLPTM1-208ENST00000588274 LINC01590Q5TEZ4 76 aa11.21□□□□□ -0.61
CLPTM1-208ENST00000588274 DPY19L4Q7Z388 723 aa11.21□□□□□ -0.61
CLPTM1-208ENST00000588274 ZNF511Q8NB15 262 aa11.21□□□□□ -0.61
CLPTM1-208ENST00000588274 SLC37A3Q8NCC5 494 aa11.21□□□□□ -0.61
CLPTM1-208ENST00000588274 PROKR2Q8NFJ6 384 aa11.21□□□□□ -0.61
CLPTM1-208ENST00000588274 OR9Q1Q8NGQ5 310 aa11.21□□□□□ -0.61
CLPTM1-208ENST00000588274 OR8S1Q8NH09 359 aa11.21□□□□□ -0.61
CLPTM1-208ENST00000588274 AMELYQ99218 206 aa11.21□□□□□ -0.61
CLPTM1-208ENST00000588274 BTBD10Q9BSF8 475 aa11.21□□□□□ -0.61
CLPTM1-208ENST00000588274 MEGF9Q9H1U4 602 aa11.21□□□□□ -0.61
CLPTM1-208ENST00000588274 METTL8Q9H825 291 aaKnown RBP11.21□□□□□ -0.61
CLPTM1-208ENST00000588274 VIPAS39Q9H9C1 493 aa11.21□□□□□ -0.61
CLPTM1-208ENST00000588274 SNTG1Q9NSN8 517 aa11.21□□□□□ -0.61
CLPTM1-208ENST00000588274 SERTAD4Q9NUC0 356 aa11.21□□□□□ -0.61
CLPTM1-208ENST00000588274 SAMD4AQ9UPU9 718 aaKnown RBP11.21□□□□□ -0.61
CLPTM1-208ENST00000588274 RHBDD3Q9Y3P4 386 aa11.21□□□□□ -0.61
CLPTM1-208ENST00000588274 CDH10Q9Y6N8 788 aa11.21□□□□□ -0.61
CLPTM1-208ENST00000588274 TENM3Q9P273 2699 aa11.21□□□□□ -0.62
CLPTM1-208ENST00000588274 GYPBP06028 91 aa11.2□□□□□ -0.62
CLPTM1-208ENST00000588274 SPARCP09486 303 aa11.2□□□□□ -0.62
CLPTM1-208ENST00000588274 CLUP10909 449 aa11.2□□□□□ -0.62
CLPTM1-208ENST00000588274 GRK5P34947 590 aa11.2□□□□□ -0.62
CLPTM1-208ENST00000588274 CX3CR1P49238 355 aa11.2□□□□□ -0.62
CLPTM1-208ENST00000588274 GSK3AP49840 483 aa11.2□□□□□ -0.62
CLPTM1-208ENST00000588274 ENTPD1P49961 510 aa11.2□□□□□ -0.62
CLPTM1-208ENST00000588274 NUDT2P50583 147 aa11.2□□□□□ -0.62
CLPTM1-208ENST00000588274 CAV3P56539 151 aa11.2□□□□□ -0.62
CLPTM1-208ENST00000588274 SPIBQ01892 262 aa11.2□□□□□ -0.62
CLPTM1-208ENST00000588274 AANATQ16613 207 aa11.2□□□□□ -0.62
CLPTM1-208ENST00000588274 LRRC10Q5BKY1 277 aa11.2□□□□□ -0.62
CLPTM1-208ENST00000588274 FAM76BQ5HYJ3 339 aa11.2□□□□□ -0.62
CLPTM1-208ENST00000588274 NCR3LG1Q68D85 454 aa11.2□□□□□ -0.62
CLPTM1-208ENST00000588274 GLYATQ6IB77 296 aa11.2□□□□□ -0.62
CLPTM1-208ENST00000588274 ZNF770Q6IQ21 691 aaPredicted RBP11.2□□□□□ -0.62
CLPTM1-208ENST00000588274 C11orf88Q6PI97 169 aa11.2□□□□□ -0.62
CLPTM1-208ENST00000588274 LYG1Q8N1E2 194 aa11.2□□□□□ -0.62
CLPTM1-208ENST00000588274 Q8N2B8 174 aa11.2□□□□□ -0.62
CLPTM1-208ENST00000588274 C11orf42Q8N5U0 333 aa11.2□□□□□ -0.62
CLPTM1-208ENST00000588274 OR10Z1Q8NGY1 313 aa11.2□□□□□ -0.62
CLPTM1-208ENST00000588274 OR2T4Q8NH00 348 aa11.2□□□□□ -0.62
CLPTM1-208ENST00000588274 MRAPQ8TCY5 172 aa11.2□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms