RNA–Protein interactions for RNA: ENST00000585437.1

ATG4D-202, Transcript of autophagy related 4D cysteine peptidase, humanhuman

TSL 5

Gene ATG4D, Length 377 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-202ENST00000585437 SMURF1Q9HCE7 757 aa7.35□□□□□ -1.23
ATG4D-202ENST00000585437 SRA1Q9HD15 236 aaKnown RBP7.35□□□□□ -1.23
ATG4D-202ENST00000585437 DDX28Q9NUL7 540 aaKnown RBP7.35□□□□□ -1.23
ATG4D-202ENST00000585437 TXNL4BQ9NX01 149 aaKnown RBP7.35□□□□□ -1.23
ATG4D-202ENST00000585437 BABAM2Q9NXR7 383 aa7.35□□□□□ -1.23
ATG4D-202ENST00000585437 EIF3KQ9UBQ5 218 aaKnown RBP7.35□□□□□ -1.23
ATG4D-202ENST00000585437 GPR160Q9UJ42 338 aa7.35□□□□□ -1.23
ATG4D-202ENST00000585437 A0A1B0GWJ7 208 aa7.34□□□□□ -1.23
ATG4D-202ENST00000585437 LYNX1G3V0Z9 82 aa7.34□□□□□ -1.23
ATG4D-202ENST00000585437 J3QRK9 145 aa7.34□□□□□ -1.23
ATG4D-202ENST00000585437 RGS9O75916 674 aaPredicted RBP7.34□□□□□ -1.23
ATG4D-202ENST00000585437 SERPINA3P01011 423 aa7.34□□□□□ -1.23
ATG4D-202ENST00000585437 IGHV1-46P01743 117 aa7.34□□□□□ -1.23
ATG4D-202ENST00000585437 CD55P08174 381 aa7.34□□□□□ -1.23
ATG4D-202ENST00000585437 LYNX1P0DP58 116 aa7.34□□□□□ -1.23
ATG4D-202ENST00000585437 SPI1P17947 270 aa7.34□□□□□ -1.23
ATG4D-202ENST00000585437 CELP19835 753 aa7.34□□□□□ -1.23
ATG4D-202ENST00000585437 GCH1P30793 250 aa7.34□□□□□ -1.23
ATG4D-202ENST00000585437 PYCR1P32322 319 aa7.34□□□□□ -1.23
ATG4D-202ENST00000585437 RPS25P62851 125 aaKnown RBP7.34□□□□□ -1.23
ATG4D-202ENST00000585437 PSG7Q13046 419 aa7.34□□□□□ -1.23
ATG4D-202ENST00000585437 ZNF181Q2M3W8 571 aa7.34□□□□□ -1.23
ATG4D-202ENST00000585437 TRIM16LQ309B1 348 aa7.34□□□□□ -1.23
ATG4D-202ENST00000585437 ALKBH6Q3KRA9 238 aa7.34□□□□□ -1.23
ATG4D-202ENST00000585437 TEX30Q5JUR7 227 aa7.34□□□□□ -1.23
ATG4D-202ENST00000585437 CORO6Q6QEF8 472 aa7.34□□□□□ -1.23
ATG4D-202ENST00000585437 LYPD4Q6UWN0 246 aa7.34□□□□□ -1.23
ATG4D-202ENST00000585437 FBXW12Q6X9E4 464 aa7.34□□□□□ -1.23
ATG4D-202ENST00000585437 LINC00346Q8IVM7 164 aa7.34□□□□□ -1.23
ATG4D-202ENST00000585437 RDH5Q92781 318 aa7.34□□□□□ -1.23
ATG4D-202ENST00000585437 HPS1Q92902 700 aa7.34□□□□□ -1.23
ATG4D-202ENST00000585437 PTP4A1Q93096 173 aa7.34□□□□□ -1.23
ATG4D-202ENST00000585437 WDFY2Q96P53 400 aa7.34□□□□□ -1.23
ATG4D-202ENST00000585437 ATF6BQ99941 703 aa7.34□□□□□ -1.23
ATG4D-202ENST00000585437 ZNF649Q9BS31 505 aa7.34□□□□□ -1.23
ATG4D-202ENST00000585437 SOX7Q9BT81 388 aa7.34□□□□□ -1.23
ATG4D-202ENST00000585437 CCDC32Q9BV29 185 aa7.34□□□□□ -1.23
ATG4D-202ENST00000585437 HCAR1Q9BXC0 346 aa7.34□□□□□ -1.23
ATG4D-202ENST00000585437 MED20Q9H944 212 aa7.34□□□□□ -1.23
ATG4D-202ENST00000585437 MARCH7Q9H992 704 aa7.34□□□□□ -1.23
ATG4D-202ENST00000585437 CYSLTR2Q9NS75 346 aa7.34□□□□□ -1.23
ATG4D-202ENST00000585437 ZNF275Q9NSD4 429 aaPredicted RBP7.34□□□□□ -1.23
ATG4D-202ENST00000585437 TMEM160Q9NX00 188 aa7.34□□□□□ -1.23
ATG4D-202ENST00000585437 ADAM30Q9UKF2 790 aa7.34□□□□□ -1.23
ATG4D-202ENST00000585437 POLR1DQ9Y2S0 133 aa7.34□□□□□ -1.23
ATG4D-202ENST00000585437 SF3B6Q9Y3B4 125 aaKnown RBP7.34□□□□□ -1.23
ATG4D-202ENST00000585437 MXRA5Q9NR99 2828 aa7.34□□□□□ -1.23
ATG4D-202ENST00000585437 GABRPO00591 440 aa7.33□□□□□ -1.24
ATG4D-202ENST00000585437 CRLF1O75462 422 aa7.33□□□□□ -1.24
ATG4D-202ENST00000585437 GLCEO94923 617 aa7.33□□□□□ -1.24
ATG4D-202ENST00000585437 CDRT1O95170 752 aa7.33□□□□□ -1.24
ATG4D-202ENST00000585437 GYPBP06028 91 aa7.33□□□□□ -1.24
ATG4D-202ENST00000585437 CD1AP06126 327 aa7.33□□□□□ -1.24
ATG4D-202ENST00000585437 ACSM4P0C7M7 580 aa7.33□□□□□ -1.24
ATG4D-202ENST00000585437 OCM2P0CE71 109 aa7.33□□□□□ -1.24
ATG4D-202ENST00000585437 OCMP0CE72 109 aaPredicted RBP7.33□□□□□ -1.24
ATG4D-202ENST00000585437 CLUP10909 449 aa7.33□□□□□ -1.24
ATG4D-202ENST00000585437 RAC2P15153 192 aa7.33□□□□□ -1.24
ATG4D-202ENST00000585437 ZNF16P17020 682 aaPredicted RBP7.33□□□□□ -1.24
ATG4D-202ENST00000585437 COL8A2P25067 703 aa7.33□□□□□ -1.24
ATG4D-202ENST00000585437 IL2RGP31785 369 aa7.33□□□□□ -1.24
ATG4D-202ENST00000585437 TGFBR1P36897 503 aa7.33□□□□□ -1.24
ATG4D-202ENST00000585437 RPS27P42677 84 aaKnown RBP7.33□□□□□ -1.24
ATG4D-202ENST00000585437 MTNR1BP49286 362 aa7.33□□□□□ -1.24
ATG4D-202ENST00000585437 GZMKP49863 264 aa7.33□□□□□ -1.24
ATG4D-202ENST00000585437 ZNF81P51508 661 aa7.33□□□□□ -1.24
ATG4D-202ENST00000585437 BLVRAP53004 296 aa7.33□□□□□ -1.24
ATG4D-202ENST00000585437 DEFA1P59665 94 aa7.33□□□□□ -1.24
ATG4D-202ENST00000585437 DEFA3P59666 94 aa7.33□□□□□ -1.24
ATG4D-202ENST00000585437 CCL8P80075 99 aa7.33□□□□□ -1.24
ATG4D-202ENST00000585437 ECH1Q13011 328 aa7.33□□□□□ -1.24
ATG4D-202ENST00000585437 CARTPTQ16568 116 aa7.33□□□□□ -1.24
ATG4D-202ENST00000585437 CCDC58Q4VC31 144 aa7.33□□□□□ -1.24
ATG4D-202ENST00000585437 ZMAT1Q5H9K5 638 aa7.33□□□□□ -1.24
ATG4D-202ENST00000585437 DDI2Q5TDH0 399 aa7.33□□□□□ -1.24
ATG4D-202ENST00000585437 C22orf42Q6IC83 251 aa7.33□□□□□ -1.24
ATG4D-202ENST00000585437 Q6ZNX1 250 aa7.33□□□□□ -1.24
ATG4D-202ENST00000585437 Q6ZR03 302 aa7.33□□□□□ -1.24
ATG4D-202ENST00000585437 KLBQ86Z14 1044 aa7.33□□□□□ -1.24
ATG4D-202ENST00000585437 SLC35F2Q8IXU6 374 aa7.33□□□□□ -1.24
ATG4D-202ENST00000585437 MS4A15Q8N5U1 240 aa7.33□□□□□ -1.24
ATG4D-202ENST00000585437 ST7LQ8TDW4 575 aa7.33□□□□□ -1.24
ATG4D-202ENST00000585437 APOBEC3DQ96AK3 386 aaPredicted RBP7.33□□□□□ -1.24
ATG4D-202ENST00000585437 HAVCR1Q96D42 359 aa7.33□□□□□ -1.24
ATG4D-202ENST00000585437 MSI2Q96DH6 328 aaKnown RBP7.33□□□□□ -1.24
ATG4D-202ENST00000585437 DIRC2Q96SL1 478 aa7.33□□□□□ -1.24
ATG4D-202ENST00000585437 SLC30A2Q9BRI3 323 aa7.33□□□□□ -1.24
ATG4D-202ENST00000585437 C1QTNF5Q9BXJ0 243 aa7.33□□□□□ -1.24
ATG4D-202ENST00000585437 OCEL1Q9H607 264 aa7.33□□□□□ -1.24
ATG4D-202ENST00000585437 RNF167Q9H6Y7 350 aa7.33□□□□□ -1.24
ATG4D-202ENST00000585437 WDR76Q9H967 626 aa7.33□□□□□ -1.24
ATG4D-202ENST00000585437 DAPK2Q9UIK4 370 aa7.33□□□□□ -1.24
ATG4D-202ENST00000585437 PURGQ9UJV8 347 aaKnown RBP7.33□□□□□ -1.24
ATG4D-202ENST00000585437 ZDHHC8Q9ULC8 765 aa7.33□□□□□ -1.24
ATG4D-202ENST00000585437 STARD10Q9Y365 291 aa7.33□□□□□ -1.24
ATG4D-202ENST00000585437 GRIP1Q9Y3R0 1128 aa7.33□□□□□ -1.24
ATG4D-202ENST00000585437 JMJD1CQ15652 2540 aa7.33□□□□□ -1.24
ATG4D-202ENST00000585437 A0A1B0GVG6 124 aa7.32□□□□□ -1.24
ATG4D-202ENST00000585437 PLSCR5A0PG75 271 aa7.32□□□□□ -1.24
ATG4D-202ENST00000585437 TVP23AA6NH52 213 aa7.32□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms