RNA–Protein interactions for RNA: ENST00000580446.1

CSNK1D-213, Transcript of casein kinase 1 delta, humanhuman

TSL 3

Gene CSNK1D, Length 612 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-213ENST00000580446 SLC25A37Q9NYZ2 338 aa11.03□□□□□ -0.64
CSNK1D-213ENST00000580446 ZKSCAN7Q9P0L1 754 aaPredicted RBP11.03□□□□□ -0.64
CSNK1D-213ENST00000580446 NOP16Q9Y3C1 178 aaKnown RBP11.03□□□□□ -0.64
CSNK1D-213ENST00000580446 TBL2Q9Y4P3 447 aaKnown RBP11.03□□□□□ -0.64
CSNK1D-213ENST00000580446 TEX13CA0A0J9YWL9 993 aa11.02□□□□□ -0.65
CSNK1D-213ENST00000580446 H3BSH0 61 aa11.02□□□□□ -0.65
CSNK1D-213ENST00000580446 RPLP1P05386 114 aaKnown RBP11.02□□□□□ -0.65
CSNK1D-213ENST00000580446 IGHV4-30-4P0DP06 118 aa11.02□□□□□ -0.65
CSNK1D-213ENST00000580446 GP9P14770 177 aa11.02□□□□□ -0.65
CSNK1D-213ENST00000580446 AZGP1P25311 298 aaKnown RBP11.02□□□□□ -0.65
CSNK1D-213ENST00000580446 GRK5P34947 590 aa11.02□□□□□ -0.65
CSNK1D-213ENST00000580446 DYNLT3P51808 116 aa11.02□□□□□ -0.65
CSNK1D-213ENST00000580446 TRAP1Q12931 704 aaKnown RBP11.02□□□□□ -0.65
CSNK1D-213ENST00000580446 SEC23BQ15437 767 aa11.02□□□□□ -0.65
CSNK1D-213ENST00000580446 KRTAP27-1Q3LI81 207 aa11.02□□□□□ -0.65
CSNK1D-213ENST00000580446 DHDDSQ86SQ9 333 aa11.02□□□□□ -0.65
CSNK1D-213ENST00000580446 MSRB3Q8IXL7 192 aa11.02□□□□□ -0.65
CSNK1D-213ENST00000580446 NDNFQ8TB73 568 aa11.02□□□□□ -0.65
CSNK1D-213ENST00000580446 FNDC8Q8TC99 324 aa11.02□□□□□ -0.65
CSNK1D-213ENST00000580446 RPL3LQ92901 407 aaKnown RBP11.02□□□□□ -0.65
CSNK1D-213ENST00000580446 APOPT1Q96IL0 206 aa11.02□□□□□ -0.65
CSNK1D-213ENST00000580446 Q96M85 177 aa11.02□□□□□ -0.65
CSNK1D-213ENST00000580446 SPATA25Q9BR10 227 aa11.02□□□□□ -0.65
CSNK1D-213ENST00000580446 IKZF5Q9H5V7 419 aa11.02□□□□□ -0.65
CSNK1D-213ENST00000580446 DCLRE1BQ9H816 532 aa11.02□□□□□ -0.65
CSNK1D-213ENST00000580446 MRPL15Q9P015 296 aaKnown RBP11.02□□□□□ -0.65
CSNK1D-213ENST00000580446 ATPIF1Q9UII2 106 aa11.02□□□□□ -0.65
CSNK1D-213ENST00000580446 IGKV1D-17A0A075B6S4 117 aa11.01□□□□□ -0.65
CSNK1D-213ENST00000580446 A6NIZ1 184 aa11.01□□□□□ -0.65
CSNK1D-213ENST00000580446 SERPINB7O75635 380 aa11.01□□□□□ -0.65
CSNK1D-213ENST00000580446 TNFRSF1BP20333 461 aa11.01□□□□□ -0.65
CSNK1D-213ENST00000580446 RAP1BP61224 184 aa11.01□□□□□ -0.65
CSNK1D-213ENST00000580446 RAP1AP62834 184 aa11.01□□□□□ -0.65
CSNK1D-213ENST00000580446 RPL31P62899 125 aaKnown RBP11.01□□□□□ -0.65
CSNK1D-213ENST00000580446 FADDQ13158 208 aa11.01□□□□□ -0.65
CSNK1D-213ENST00000580446 FAM27D1Q5T7N8 215 aa11.01□□□□□ -0.65
CSNK1D-213ENST00000580446 PLBD1Q6P4A8 553 aa11.01□□□□□ -0.65
CSNK1D-213ENST00000580446 ZIM3Q96PE6 472 aa11.01□□□□□ -0.65
CSNK1D-213ENST00000580446 PITX2Q99697 317 aa11.01□□□□□ -0.65
CSNK1D-213ENST00000580446 SYT4Q9H2B2 425 aa11.01□□□□□ -0.65
CSNK1D-213ENST00000580446 YY1AP1Q9H869 796 aa11.01□□□□□ -0.65
CSNK1D-213ENST00000580446 ISYNA1Q9NPH2 558 aa11.01□□□□□ -0.65
CSNK1D-213ENST00000580446 SLAMF8Q9P0V8 285 aa11.01□□□□□ -0.65
CSNK1D-213ENST00000580446 OR2AT4A6NND4 320 aa11□□□□□ -0.65
CSNK1D-213ENST00000580446 IL6P05231 212 aa11□□□□□ -0.65
CSNK1D-213ENST00000580446 PGA5P0DJD9 388 aa11□□□□□ -0.65
CSNK1D-213ENST00000580446 SLC2A1P11166 492 aa11□□□□□ -0.65
CSNK1D-213ENST00000580446 HOXB9P17482 250 aaPredicted RBP11□□□□□ -0.65
CSNK1D-213ENST00000580446 CD247P20963 164 aa11□□□□□ -0.65
CSNK1D-213ENST00000580446 NAA10P41227 235 aaPredicted RBP11□□□□□ -0.65
CSNK1D-213ENST00000580446 LSM6P62312 80 aaKnown RBP11□□□□□ -0.65
CSNK1D-213ENST00000580446 HIST1H3AP68431 136 aa11□□□□□ -0.65
CSNK1D-213ENST00000580446 HIST2H3PS2Q5TEC6 136 aa11□□□□□ -0.65
CSNK1D-213ENST00000580446 ZNF626Q68DY1 528 aa11□□□□□ -0.65
CSNK1D-213ENST00000580446 TMPRSS11FQ6ZWK6 438 aa11□□□□□ -0.65
CSNK1D-213ENST00000580446 HIST2H3AQ71DI3 136 aa11□□□□□ -0.65
CSNK1D-213ENST00000580446 TRMT10CQ7L0Y3 403 aaKnown RBP11□□□□□ -0.65
CSNK1D-213ENST00000580446 GJC3Q8NFK1 279 aa11□□□□□ -0.65
CSNK1D-213ENST00000580446 OR8U1Q8NH10 309 aa11□□□□□ -0.65
CSNK1D-213ENST00000580446 TMEM239Q8WW34 195 aa11□□□□□ -0.65
CSNK1D-213ENST00000580446 GTF2H4Q92759 462 aa11□□□□□ -0.65
CSNK1D-213ENST00000580446 WDR55Q9H6Y2 383 aaPredicted RBP11□□□□□ -0.65
CSNK1D-213ENST00000580446 LIN7BQ9HAP6 207 aa11□□□□□ -0.65
CSNK1D-213ENST00000580446 ZFP57Q9NU63 452 aa11□□□□□ -0.65
CSNK1D-213ENST00000580446 PNPOQ9NVS9 261 aa11□□□□□ -0.65
CSNK1D-213ENST00000580446 USE1Q9NZ43 259 aa11□□□□□ -0.65
CSNK1D-213ENST00000580446 NLKQ9UBE8 527 aa11□□□□□ -0.65
CSNK1D-213ENST00000580446 PRSS37A4D1T9 235 aa10.99□□□□□ -0.65
CSNK1D-213ENST00000580446 SDHDO14521 159 aa10.99□□□□□ -0.65
CSNK1D-213ENST00000580446 OR5F1O95221 314 aa10.99□□□□□ -0.65
CSNK1D-213ENST00000580446 SLC9A3P48764 834 aa10.99□□□□□ -0.65
CSNK1D-213ENST00000580446 FHL1Q13642 323 aa10.99□□□□□ -0.65
CSNK1D-213ENST00000580446 ACP7Q6ZNF0 438 aa10.99□□□□□ -0.65
CSNK1D-213ENST00000580446 HAPLN4Q86UW8 402 aa10.99□□□□□ -0.65
CSNK1D-213ENST00000580446 OR13C2Q8NGS9 318 aa10.99□□□□□ -0.65
CSNK1D-213ENST00000580446 AKR1E2Q96JD6 320 aa10.99□□□□□ -0.65
CSNK1D-213ENST00000580446 TSSK2Q96PF2 358 aa10.99□□□□□ -0.65
CSNK1D-213ENST00000580446 SP140LQ9H930 580 aa10.99□□□□□ -0.65
CSNK1D-213ENST00000580446 SERPINE3A8MV23 424 aa10.98□□□□□ -0.65
CSNK1D-213ENST00000580446 M0QX08 132 aa10.98□□□□□ -0.65
CSNK1D-213ENST00000580446 POLR3GO15318 223 aaPredicted RBP10.98□□□□□ -0.65
CSNK1D-213ENST00000580446 KHDRBS3O75525 346 aaKnown RBP10.98□□□□□ -0.65
CSNK1D-213ENST00000580446 IFNA6P05013 189 aa10.98□□□□□ -0.65
CSNK1D-213ENST00000580446 BPGMP07738 259 aa10.98□□□□□ -0.65
CSNK1D-213ENST00000580446 IFI30P13284 250 aa10.98□□□□□ -0.65
CSNK1D-213ENST00000580446 CNTFRP26992 372 aa10.98□□□□□ -0.65
CSNK1D-213ENST00000580446 SLC6A1P30531 599 aa10.98□□□□□ -0.65
CSNK1D-213ENST00000580446 MDH1P40925 334 aaKnown RBP10.98□□□□□ -0.65
CSNK1D-213ENST00000580446 DLX6P56179 175 aa10.98□□□□□ -0.65
CSNK1D-213ENST00000580446 HAGHQ16775 308 aa10.98□□□□□ -0.65
CSNK1D-213ENST00000580446 ZNF770Q6IQ21 691 aaPredicted RBP10.98□□□□□ -0.65
CSNK1D-213ENST00000580446 OGFOD2Q6N063 350 aa10.98□□□□□ -0.65
CSNK1D-213ENST00000580446 MAVSQ7Z434 540 aa10.98□□□□□ -0.65
CSNK1D-213ENST00000580446 OR2T27Q8NH04 317 aa10.98□□□□□ -0.65
CSNK1D-213ENST00000580446 RBM14Q96PK6 669 aaKnown RBP10.98□□□□□ -0.65
CSNK1D-213ENST00000580446 DNTTIP1Q9H147 329 aa10.98□□□□□ -0.65
CSNK1D-213ENST00000580446 TBC1D23Q9NUY8 699 aa10.98□□□□□ -0.65
CSNK1D-213ENST00000580446 GRHPRQ9UBQ7 328 aa10.98□□□□□ -0.65
CSNK1D-213ENST00000580446 ZNF222Q9UK12 451 aa10.98□□□□□ -0.65
CSNK1D-213ENST00000580446 ANKRD30BLA7E2S9 258 aa10.97□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms