RNA–Protein interactions for RNA: ENST00000578519.5

SKA2-204, Transcript of spindle and kinetochore associated complex subunit 2, humanhuman

TSL 3

Gene SKA2, Length 894 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA2-204ENST00000578519 MKRN2OSH3BPM6 223 aa9.7□□□□□ -0.86
SKA2-204ENST00000578519 KLK10O43240 276 aa9.7□□□□□ -0.86
SKA2-204ENST00000578519 SSNA1O43805 119 aa9.7□□□□□ -0.86
SKA2-204ENST00000578519 CA11O75493 328 aa9.7□□□□□ -0.86
SKA2-204ENST00000578519 DBHP09172 617 aa9.7□□□□□ -0.86
SKA2-204ENST00000578519 TMIGD3P0DMS9 266 aaPredicted RBP9.7□□□□□ -0.86
SKA2-204ENST00000578519 FAHP16930 419 aa9.7□□□□□ -0.86
SKA2-204ENST00000578519 CPT2P23786 658 aa9.7□□□□□ -0.86
SKA2-204ENST00000578519 ERP29P30040 261 aaKnown RBP9.7□□□□□ -0.86
SKA2-204ENST00000578519 AGTR1P30556 359 aa9.7□□□□□ -0.86
SKA2-204ENST00000578519 HOXC12P31275 282 aa9.7□□□□□ -0.86
SKA2-204ENST00000578519 BTCP35070 178 aa9.7□□□□□ -0.86
SKA2-204ENST00000578519 PTGER4P35408 488 aa9.7□□□□□ -0.86
SKA2-204ENST00000578519 VEGFCP49767 419 aa9.7□□□□□ -0.86
SKA2-204ENST00000578519 RBP2P50120 134 aa9.7□□□□□ -0.86
SKA2-204ENST00000578519 MTCP1P56278 107 aa9.7□□□□□ -0.86
SKA2-204ENST00000578519 UBE2NP61088 152 aaKnown RBP9.7□□□□□ -0.86
SKA2-204ENST00000578519 MRPS15P82914 257 aaKnown RBP9.7□□□□□ -0.86
SKA2-204ENST00000578519 QRFPP83859 136 aa9.7□□□□□ -0.86
SKA2-204ENST00000578519 ZNF260Q3ZCT1 412 aa9.7□□□□□ -0.86
SKA2-204ENST00000578519 ATAD3CQ5T2N8 411 aa9.7□□□□□ -0.86
SKA2-204ENST00000578519 RPUSD3Q6P087 351 aaKnown RBP9.7□□□□□ -0.86
SKA2-204ENST00000578519 Q6ZTK2 550 aa9.7□□□□□ -0.86
SKA2-204ENST00000578519 MRPL21Q7Z2W9 205 aaKnown RBP9.7□□□□□ -0.86
SKA2-204ENST00000578519 NAA40Q86UY6 237 aa9.7□□□□□ -0.86
SKA2-204ENST00000578519 GABRG1Q8N1C3 465 aa9.7□□□□□ -0.86
SKA2-204ENST00000578519 ACBD4Q8NC06 268 aa9.7□□□□□ -0.86
SKA2-204ENST00000578519 OR51T1Q8NGJ9 327 aa9.7□□□□□ -0.86
SKA2-204ENST00000578519 OR1K1Q8NGR3 316 aa9.7□□□□□ -0.86
SKA2-204ENST00000578519 AQP3Q92482 292 aa9.7□□□□□ -0.86
SKA2-204ENST00000578519 PIGTQ969N2 578 aa9.7□□□□□ -0.86
SKA2-204ENST00000578519 SPSB4Q96A44 273 aa9.7□□□□□ -0.86
SKA2-204ENST00000578519 RAB3CQ96E17 227 aa9.7□□□□□ -0.86
SKA2-204ENST00000578519 MRPS24Q96EL2 167 aaKnown RBP9.7□□□□□ -0.86
SKA2-204ENST00000578519 SCGB3A2Q96PL1 93 aa9.7□□□□□ -0.86
SKA2-204ENST00000578519 PRRT1Q99946 306 aa9.7□□□□□ -0.86
SKA2-204ENST00000578519 MRPL15Q9P015 296 aaKnown RBP9.7□□□□□ -0.86
SKA2-204ENST00000578519 SPRR3Q9UBC9 169 aa9.7□□□□□ -0.86
SKA2-204ENST00000578519 EIF3KQ9UBQ5 218 aaKnown RBP9.7□□□□□ -0.86
SKA2-204ENST00000578519 ITGB1BP2Q9UKP3 347 aa9.7□□□□□ -0.86
SKA2-204ENST00000578519 LIPGQ9Y5X9 500 aa9.7□□□□□ -0.86
SKA2-204ENST00000578519 NCOR1O75376 2440 aa9.7□□□□□ -0.86
SKA2-204ENST00000578519 EFSO43281 561 aa9.69□□□□□ -0.86
SKA2-204ENST00000578519 CREBL2O60519 120 aaPredicted RBP9.69□□□□□ -0.86
SKA2-204ENST00000578519 ICMTO60725 284 aa9.69□□□□□ -0.86
SKA2-204ENST00000578519 CDC14BO60729 498 aa9.69□□□□□ -0.86
SKA2-204ENST00000578519 IGHV3-9P01782 118 aa9.69□□□□□ -0.86
SKA2-204ENST00000578519 IFNA6P05013 189 aa9.69□□□□□ -0.86
SKA2-204ENST00000578519 CRHP06850 196 aa9.69□□□□□ -0.86
SKA2-204ENST00000578519 HOXD4P09016 255 aaPredicted RBP9.69□□□□□ -0.86
SKA2-204ENST00000578519 TMEM225BP0DP42 221 aa9.69□□□□□ -0.86
SKA2-204ENST00000578519 NAT2P11245 290 aa9.69□□□□□ -0.86
SKA2-204ENST00000578519 CCR6P51684 374 aa9.69□□□□□ -0.86
SKA2-204ENST00000578519 RSU1Q15404 277 aa9.69□□□□□ -0.86
SKA2-204ENST00000578519 GSG1Q2KHT4 349 aa9.69□□□□□ -0.86
SKA2-204ENST00000578519 RNASE10Q5GAN6 216 aaKnown RBP9.69□□□□□ -0.86
SKA2-204ENST00000578519 MTFR2Q6P444 385 aa9.69□□□□□ -0.86
SKA2-204ENST00000578519 COLCA1Q6ZS62 124 aa9.69□□□□□ -0.86
SKA2-204ENST00000578519 FAM214BQ7L5A3 538 aa9.69□□□□□ -0.86
SKA2-204ENST00000578519 NUFIP2Q7Z417 695 aaKnown RBP9.69□□□□□ -0.86
SKA2-204ENST00000578519 NOXA1Q86UR1 476 aa9.69□□□□□ -0.86
SKA2-204ENST00000578519 TMEM17Q86X19 198 aa9.69□□□□□ -0.86
SKA2-204ENST00000578519 PAQR4Q8N4S7 273 aaPredicted RBP9.69□□□□□ -0.86
SKA2-204ENST00000578519 SSC4DQ8WTU2 575 aa9.69□□□□□ -0.86
SKA2-204ENST00000578519 ST6GAL2Q96JF0 529 aa9.69□□□□□ -0.86
SKA2-204ENST00000578519 TRIB1Q96RU8 372 aa9.69□□□□□ -0.86
SKA2-204ENST00000578519 COL25A1Q9BXS0 654 aaPredicted RBP9.69□□□□□ -0.86
SKA2-204ENST00000578519 RANBP3Q9H6Z4 567 aaPredicted RBP9.69□□□□□ -0.86
SKA2-204ENST00000578519 ELL3Q9HB65 397 aaPredicted RBP9.69□□□□□ -0.86
SKA2-204ENST00000578519 NKIRAS2Q9NYR9 191 aa9.69□□□□□ -0.86
SKA2-204ENST00000578519 NOP16Q9Y3C1 178 aaKnown RBP9.69□□□□□ -0.86
SKA2-204ENST00000578519 RHBDD3Q9Y3P4 386 aa9.69□□□□□ -0.86
SKA2-204ENST00000578519 GPR179Q6PRD1 2367 aa9.68□□□□□ -0.86
SKA2-204ENST00000578519 KNTC1P50748 2209 aa9.68□□□□□ -0.86
SKA2-204ENST00000578519 A0A096LPE4 126 aa9.68□□□□□ -0.86
SKA2-204ENST00000578519 A0A0A6YYJ9 748 aa9.68□□□□□ -0.86
SKA2-204ENST00000578519 hCG_38984A0A1B0GV85 526 aa9.68□□□□□ -0.86
SKA2-204ENST00000578519 A0A1W2PPZ6 126 aa9.68□□□□□ -0.86
SKA2-204ENST00000578519 C5orf49A4QMS7 147 aa9.68□□□□□ -0.86
SKA2-204ENST00000578519 SERPINE3A8MV23 424 aa9.68□□□□□ -0.86
SKA2-204ENST00000578519 RAB27BO00194 218 aa9.68□□□□□ -0.86
SKA2-204ENST00000578519 TPD52L2O43399 206 aaKnown RBP9.68□□□□□ -0.86
SKA2-204ENST00000578519 GMDSO60547 372 aa9.68□□□□□ -0.86
SKA2-204ENST00000578519 PATE4P0C8F1 98 aa9.68□□□□□ -0.86
SKA2-204ENST00000578519 ANXA3P12429 323 aa9.68□□□□□ -0.86
SKA2-204ENST00000578519 TUBG1P23258 451 aa9.68□□□□□ -0.86
SKA2-204ENST00000578519 OR3A4PP47883 348 aa9.68□□□□□ -0.86
SKA2-204ENST00000578519 MECP2P51608 486 aaKnown RBP9.68□□□□□ -0.86
SKA2-204ENST00000578519 RPS27AP62979 156 aaKnown RBP9.68□□□□□ -0.86
SKA2-204ENST00000578519 FAM3AP98173 230 aa9.68□□□□□ -0.86
SKA2-204ENST00000578519 CD83Q01151 205 aa9.68□□□□□ -0.86
SKA2-204ENST00000578519 CBX3Q13185 183 aa9.68□□□□□ -0.86
SKA2-204ENST00000578519 ARFRP1Q13795 201 aa9.68□□□□□ -0.86
SKA2-204ENST00000578519 OR8B8Q15620 311 aa9.68□□□□□ -0.86
SKA2-204ENST00000578519 UBE2V2Q15819 145 aa9.68□□□□□ -0.86
SKA2-204ENST00000578519 TBC1D28Q2M2D7 210 aa9.68□□□□□ -0.86
SKA2-204ENST00000578519 SNAI3Q3KNW1 292 aa9.68□□□□□ -0.86
SKA2-204ENST00000578519 SLC22A6Q4U2R8 563 aa9.68□□□□□ -0.86
SKA2-204ENST00000578519 RNFT1Q5M7Z0 435 aa9.68□□□□□ -0.86
SKA2-204ENST00000578519 C1QTNF12Q5T7M4 302 aa9.68□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms