RNA–Protein interactions for RNA: ENST00000578172.1

NDEL1-204, Transcript of nudE neurodevelopment protein 1 like 1, humanhuman

Gene NDEL1, Length 3,927 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDEL1-204ENST00000578172 OR6C65A6NJZ3 312 aa12.11□□□□□ -0.47
NDEL1-204ENST00000578172 TLX3O43711 291 aaPredicted RBP12.11□□□□□ -0.47
NDEL1-204ENST00000578172 RAP1BP61224 184 aa12.11□□□□□ -0.47
NDEL1-204ENST00000578172 RPS18P62269 152 aaKnown RBP12.11□□□□□ -0.47
NDEL1-204ENST00000578172 RAP1AP62834 184 aa12.11□□□□□ -0.47
NDEL1-204ENST00000578172 CCL7P80098 99 aa12.11□□□□□ -0.47
NDEL1-204ENST00000578172 AVPI1Q5T686 147 aa12.11□□□□□ -0.47
NDEL1-204ENST00000578172 C11orf87Q6NUJ2 197 aa12.11□□□□□ -0.47
NDEL1-204ENST00000578172 SYT13Q7L8C5 426 aa12.11□□□□□ -0.47
NDEL1-204ENST00000578172 GPX7Q96SL4 187 aaPredicted RBP12.11□□□□□ -0.47
NDEL1-204ENST00000578172 CDC6Q99741 560 aa12.11□□□□□ -0.47
NDEL1-204ENST00000578172 TGIF2Q9GZN2 237 aa12.11□□□□□ -0.47
NDEL1-204ENST00000578172 ZNF275Q9NSD4 429 aaPredicted RBP12.11□□□□□ -0.47
NDEL1-204ENST00000578172 RAB22AQ9UL26 194 aa12.11□□□□□ -0.47
NDEL1-204ENST00000578172 RFPL4AA6NLU0 287 aa12.11□□□□□ -0.47
NDEL1-204ENST00000578172 RFPL4AL1F8VTS6 287 aa12.11□□□□□ -0.47
NDEL1-204ENST00000578172 NAGAP17050 411 aa12.11□□□□□ -0.47
NDEL1-204ENST00000578172 CSNK1A1P48729 337 aa12.11□□□□□ -0.47
NDEL1-204ENST00000578172 SNRPEP62304 92 aaKnown RBP12.11□□□□□ -0.47
NDEL1-204ENST00000578172 ZNF529Q6P280 563 aa12.11□□□□□ -0.47
NDEL1-204ENST00000578172 SLC25A21Q9BQT8 299 aaPredicted RBP12.11□□□□□ -0.47
NDEL1-204ENST00000578172 ZNF319Q9P2F9 582 aa12.11□□□□□ -0.47
NDEL1-204ENST00000578172 PIGLQ9Y2B2 252 aa12.11□□□□□ -0.47
NDEL1-204ENST00000578172 NCOA6Q14686 2063 aaPredicted RBP12.11□□□□□ -0.47
NDEL1-204ENST00000578172 DENND4AQ7Z401 1863 aa12.11□□□□□ -0.47
NDEL1-204ENST00000578172 C9orf170A2RU37 121 aa12.11□□□□□ -0.47
NDEL1-204ENST00000578172 RBMXP38159 391 aaKnown RBP12.11□□□□□ -0.47
NDEL1-204ENST00000578172 KCNJ3P48549 501 aa12.11□□□□□ -0.47
NDEL1-204ENST00000578172 DCAF7P61962 342 aa12.11□□□□□ -0.47
NDEL1-204ENST00000578172 UNC119Q13432 240 aa12.11□□□□□ -0.47
NDEL1-204ENST00000578172 C1QL2Q7Z5L3 287 aa12.11□□□□□ -0.47
NDEL1-204ENST00000578172 OR1S1Q8NH92 325 aa12.11□□□□□ -0.47
NDEL1-204ENST00000578172 UBALD1Q8TB05 177 aa12.11□□□□□ -0.47
NDEL1-204ENST00000578172 USB1Q9BQ65 265 aaKnown RBP12.11□□□□□ -0.47
NDEL1-204ENST00000578172 OCIAD1Q9NX40 245 aa12.11□□□□□ -0.47
NDEL1-204ENST00000578172 WNT16Q9UBV4 365 aa12.11□□□□□ -0.47
NDEL1-204ENST00000578172 TRAV14DV4A0A0A6YYC5 116 aa12.1□□□□□ -0.47
NDEL1-204ENST00000578172 RAB27BO00194 218 aa12.1□□□□□ -0.47
NDEL1-204ENST00000578172 POU2F2P09086 479 aa12.1□□□□□ -0.47
NDEL1-204ENST00000578172 EDN3P14138 238 aa12.1□□□□□ -0.47
NDEL1-204ENST00000578172 CPN1P15169 458 aa12.1□□□□□ -0.47
NDEL1-204ENST00000578172 RPA2P15927 270 aa12.1□□□□□ -0.47
NDEL1-204ENST00000578172 MTCP1P56278 107 aa12.1□□□□□ -0.47
NDEL1-204ENST00000578172 ZNF273Q14593 569 aa12.1□□□□□ -0.47
NDEL1-204ENST00000578172 MICBQ29980 383 aa12.1□□□□□ -0.47
NDEL1-204ENST00000578172 ABCA11PQ4W5N1 156 aa12.1□□□□□ -0.47
NDEL1-204ENST00000578172 FNDC7Q5VTL7 733 aa12.1□□□□□ -0.47
NDEL1-204ENST00000578172 AKR7LQ8NHP1 331 aa12.1□□□□□ -0.47
NDEL1-204ENST00000578172 ASB10Q8WXI3 467 aa12.1□□□□□ -0.47
NDEL1-204ENST00000578172 LILRA5A6NI73 299 aa12.1□□□□□ -0.47
NDEL1-204ENST00000578172 C3orf80F5H4A9 247 aa12.1□□□□□ -0.47
NDEL1-204ENST00000578172 SNAPINO95295 136 aa12.1□□□□□ -0.47
NDEL1-204ENST00000578172 DUSP1P28562 367 aa12.1□□□□□ -0.47
NDEL1-204ENST00000578172 AFF3P51826 1226 aaKnown RBP12.1□□□□□ -0.47
NDEL1-204ENST00000578172 RAB2AP61019 212 aa12.1□□□□□ -0.47
NDEL1-204ENST00000578172 RGS7BPQ6MZT1 257 aaPredicted RBP12.1□□□□□ -0.47
NDEL1-204ENST00000578172 PRR18Q8N4B5 295 aa12.1□□□□□ -0.47
NDEL1-204ENST00000578172 NUBPLQ8TB37 319 aa12.1□□□□□ -0.47
NDEL1-204ENST00000578172 TTC9Q92623 222 aa12.1□□□□□ -0.47
NDEL1-204ENST00000578172 URM1Q9BTM9 101 aaKnown RBP12.1□□□□□ -0.47
NDEL1-204ENST00000578172 MUC3AQ02505 3323 aa12.1□□□□□ -0.47
NDEL1-204ENST00000578172 PATE3B3GLJ2 98 aa12.1□□□□□ -0.47
NDEL1-204ENST00000578172 ZFAND5O76080 213 aa12.1□□□□□ -0.47
NDEL1-204ENST00000578172 RCC1P18754 421 aaPredicted RBP12.1□□□□□ -0.47
NDEL1-204ENST00000578172 DCDP81605 110 aaKnown RBP12.1□□□□□ -0.47
NDEL1-204ENST00000578172 LYG2Q86SG7 212 aa12.1□□□□□ -0.47
NDEL1-204ENST00000578172 PPP1R3BQ86XI6 285 aa12.1□□□□□ -0.47
NDEL1-204ENST00000578172 BVESQ8NE79 360 aa12.1□□□□□ -0.47
NDEL1-204ENST00000578172 MED6O75586 246 aa12.09□□□□□ -0.47
NDEL1-204ENST00000578172 CCL2P13500 99 aa12.09□□□□□ -0.47
NDEL1-204ENST00000578172 RPS10P46783 165 aaKnown RBP12.09□□□□□ -0.47
NDEL1-204ENST00000578172 SLC43A2Q8N370 569 aa12.09□□□□□ -0.47
NDEL1-204ENST00000578172 OR5M9Q8NGP3 310 aa12.09□□□□□ -0.47
NDEL1-204ENST00000578172 ZNF519Q8TB69 540 aa12.09□□□□□ -0.47
NDEL1-204ENST00000578172 ULBP2Q9BZM5 246 aa12.09□□□□□ -0.47
NDEL1-204ENST00000578172 GAREM1Q9H706 876 aa12.09□□□□□ -0.47
NDEL1-204ENST00000578172 G6PC2Q9NQR9 355 aa12.09□□□□□ -0.47
NDEL1-204ENST00000578172 SIGLEC6O43699 453 aa12.09□□□□□ -0.47
NDEL1-204ENST00000578172 RAB32Q13637 225 aa12.09□□□□□ -0.47
NDEL1-204ENST00000578172 GUCA2BQ16661 112 aa12.09□□□□□ -0.47
NDEL1-204ENST00000578172 PLEKHN1Q494U1 663 aaPredicted RBP12.09□□□□□ -0.47
NDEL1-204ENST00000578172 LY6G6FQ5SQ64 297 aa12.09□□□□□ -0.47
NDEL1-204ENST00000578172 EIF5AL1Q6IS14 154 aaKnown RBP12.09□□□□□ -0.47
NDEL1-204ENST00000578172 ANKRD37Q7Z713 158 aa12.09□□□□□ -0.47
NDEL1-204ENST00000578172 OR14L1PQ8NHC6 308 aa12.09□□□□□ -0.47
NDEL1-204ENST00000578172 PIGCQ92535 297 aa12.09□□□□□ -0.47
NDEL1-204ENST00000578172 ZNF385AQ96PM9 386 aaKnown RBP12.09□□□□□ -0.47
NDEL1-204ENST00000578172 C14orf166Q9Y224 244 aaKnown RBP12.09□□□□□ -0.47
NDEL1-204ENST00000578172 URGCP-MRPS24S4R325 110 aa12.09□□□□□ -0.47
NDEL1-204ENST00000578172 LTBP2Q14767 1821 aa12.09□□□□□ -0.47
NDEL1-204ENST00000578172 TUBG1P23258 451 aa12.09□□□□□ -0.47
NDEL1-204ENST00000578172 CD80P33681 288 aa12.09□□□□□ -0.47
NDEL1-204ENST00000578172 CASRP41180 1078 aa12.09□□□□□ -0.47
NDEL1-204ENST00000578172 IGLV3-21P80748 117 aaPredicted RBP12.09□□□□□ -0.47
NDEL1-204ENST00000578172 IAH1Q2TAA2 248 aaPredicted RBP12.09□□□□□ -0.47
NDEL1-204ENST00000578172 HOXB13Q92826 284 aaPredicted RBP12.09□□□□□ -0.47
NDEL1-204ENST00000578172 ZCCHC4Q9H5U6 513 aa12.09□□□□□ -0.47
NDEL1-204ENST00000578172 KIF25Q9UIL4 384 aa12.09□□□□□ -0.47
NDEL1-204ENST00000578172 FREM1Q5H8C1 2179 aa12.09□□□□□ -0.47
NDEL1-204ENST00000578172 TNFSF11O14788 317 aa12.08□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms