RNA–Protein interactions for RNA: ENST00000576033.5

CCDC40-215, Transcript of coiled-coil domain containing 40, humanhuman

TSL 4

Gene CCDC40, Length 466 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-215ENST00000576033 RAD52P43351 418 aa6.73□□□□□ -1.33
CCDC40-215ENST00000576033 TGM4P49221 684 aa6.73□□□□□ -1.33
CCDC40-215ENST00000576033 PPOXP50336 477 aa6.73□□□□□ -1.33
CCDC40-215ENST00000576033 BLVRAP53004 296 aa6.73□□□□□ -1.33
CCDC40-215ENST00000576033 OR12D2P58182 307 aa6.73□□□□□ -1.33
CCDC40-215ENST00000576033 ACTA2P62736 377 aa6.73□□□□□ -1.33
CCDC40-215ENST00000576033 ACTG2P63267 376 aa6.73□□□□□ -1.33
CCDC40-215ENST00000576033 CCL8P80075 99 aa6.73□□□□□ -1.33
CCDC40-215ENST00000576033 TNK1Q13470 666 aa6.73□□□□□ -1.33
CCDC40-215ENST00000576033 GK2Q14410 553 aaPredicted RBP6.73□□□□□ -1.33
CCDC40-215ENST00000576033 CDK5R1Q15078 307 aa6.73□□□□□ -1.33
CCDC40-215ENST00000576033 TAF13Q15543 124 aa6.73□□□□□ -1.33
CCDC40-215ENST00000576033 TRAM1Q15629 374 aa6.73□□□□□ -1.33
CCDC40-215ENST00000576033 CCDC58Q4VC31 144 aa6.73□□□□□ -1.33
CCDC40-215ENST00000576033 TP53I3Q53FA7 332 aa6.73□□□□□ -1.33
CCDC40-215ENST00000576033 MBNL2Q5VZF2 373 aaKnown RBP6.73□□□□□ -1.33
CCDC40-215ENST00000576033 TMEM91Q6ZNR0 172 aa6.73□□□□□ -1.33
CCDC40-215ENST00000576033 COLCA1Q6ZS62 124 aa6.73□□□□□ -1.33
CCDC40-215ENST00000576033 ZFP41Q8N8Y5 198 aa6.73□□□□□ -1.33
CCDC40-215ENST00000576033 IL17RDQ8NFM7 739 aa6.73□□□□□ -1.33
CCDC40-215ENST00000576033 OR8B12Q8NGG6 310 aa6.73□□□□□ -1.33
CCDC40-215ENST00000576033 HAVCR2Q8TDQ0 301 aa6.73□□□□□ -1.33
CCDC40-215ENST00000576033 BORCS5Q969J3 196 aa6.73□□□□□ -1.33
CCDC40-215ENST00000576033 PELI1Q96FA3 418 aa6.73□□□□□ -1.33
CCDC40-215ENST00000576033 C4orf36Q96KX1 117 aa6.73□□□□□ -1.33
CCDC40-215ENST00000576033 DCLRE1CQ96SD1 692 aaKnown RBP6.73□□□□□ -1.33
CCDC40-215ENST00000576033 KCNJ15Q99712 375 aa6.73□□□□□ -1.33
CCDC40-215ENST00000576033 C1QTNF5Q9BXJ0 243 aa6.73□□□□□ -1.33
CCDC40-215ENST00000576033 BARHL1Q9BZE3 327 aa6.73□□□□□ -1.33
CCDC40-215ENST00000576033 BCL2L14Q9BZR8 327 aa6.73□□□□□ -1.33
CCDC40-215ENST00000576033 MOV10Q9HCE1 1003 aaKnown RBP6.73□□□□□ -1.33
CCDC40-215ENST00000576033 EIF3KQ9UBQ5 218 aaKnown RBP6.73□□□□□ -1.33
CCDC40-215ENST00000576033 MRM2Q9UI43 246 aaKnown RBP6.73□□□□□ -1.33
CCDC40-215ENST00000576033 PURGQ9UJV8 347 aaKnown RBP6.73□□□□□ -1.33
CCDC40-215ENST00000576033 TLN2Q9Y4G6 2542 aa6.73□□□□□ -1.33
CCDC40-215ENST00000576033 NF1P21359 2839 aa6.72□□□□□ -1.33
CCDC40-215ENST00000576033 A0A096LNT2 108 aa6.72□□□□□ -1.33
CCDC40-215ENST00000576033 SHISA3A0PJX4 238 aa6.72□□□□□ -1.33
CCDC40-215ENST00000576033 CLDN25C9JDP6 229 aa6.72□□□□□ -1.33
CCDC40-215ENST00000576033 RNF223E7ERA6 249 aa6.72□□□□□ -1.33
CCDC40-215ENST00000576033 H7C1Q1 480 aa6.72□□□□□ -1.33
CCDC40-215ENST00000576033 WNT9BO14905 357 aa6.72□□□□□ -1.33
CCDC40-215ENST00000576033 LMX1BO60663 402 aa6.72□□□□□ -1.33
CCDC40-215ENST00000576033 CDC14BO60729 498 aa6.72□□□□□ -1.33
CCDC40-215ENST00000576033 SRSF10O75494 262 aaKnown RBP6.72□□□□□ -1.33
CCDC40-215ENST00000576033 SULT1C4O75897 302 aa6.72□□□□□ -1.33
CCDC40-215ENST00000576033 RPP14O95059 124 aaKnown RBP6.72□□□□□ -1.33
CCDC40-215ENST00000576033 BMP4P12644 408 aa6.72□□□□□ -1.33
CCDC40-215ENST00000576033 PAX1P15863 534 aa6.72□□□□□ -1.33
CCDC40-215ENST00000576033 CELP19835 753 aa6.72□□□□□ -1.33
CCDC40-215ENST00000576033 GCH1P30793 250 aa6.72□□□□□ -1.33
CCDC40-215ENST00000576033 TPTEP56180 551 aa6.72□□□□□ -1.33
CCDC40-215ENST00000576033 PSMA6P60900 246 aaKnown RBP6.72□□□□□ -1.33
CCDC40-215ENST00000576033 RPS23P62266 143 aaKnown RBP6.72□□□□□ -1.33
CCDC40-215ENST00000576033 RPS11P62280 158 aaKnown RBP eCLIP6.72□□□□□ -1.33
CCDC40-215ENST00000576033 MRPL28Q13084 256 aaKnown RBP6.72□□□□□ -1.33
CCDC40-215ENST00000576033 CLEC12BQ2HXU8 276 aa6.72□□□□□ -1.33
CCDC40-215ENST00000576033 ODF4Q2M2E3 257 aa6.72□□□□□ -1.33
CCDC40-215ENST00000576033 ZNF718Q3SXZ3 478 aa6.72□□□□□ -1.33
CCDC40-215ENST00000576033 C1QTNF12Q5T7M4 302 aa6.72□□□□□ -1.33
CCDC40-215ENST00000576033 FDX2Q6P4F2 183 aa6.72□□□□□ -1.33
CCDC40-215ENST00000576033 DNM1P46Q6ZS02 220 aa6.72□□□□□ -1.33
CCDC40-215ENST00000576033 KCTD20Q7Z5Y7 419 aa6.72□□□□□ -1.33
CCDC40-215ENST00000576033 CROCCP3Q8IVE0 287 aa6.72□□□□□ -1.33
CCDC40-215ENST00000576033 MCFD2Q8NI22 146 aa6.72□□□□□ -1.33
CCDC40-215ENST00000576033 S100ZQ8WXG8 99 aa6.72□□□□□ -1.33
CCDC40-215ENST00000576033 SPTSSAQ969W0 71 aa6.72□□□□□ -1.33
CCDC40-215ENST00000576033 SLC25A46Q96AG3 418 aa6.72□□□□□ -1.33
CCDC40-215ENST00000576033 APOBEC3DQ96AK3 386 aaPredicted RBP6.72□□□□□ -1.33
CCDC40-215ENST00000576033 SMIM19Q96E16 107 aa6.72□□□□□ -1.33
CCDC40-215ENST00000576033 KCTD7Q96MP8 289 aa6.72□□□□□ -1.33
CCDC40-215ENST00000576033 OR8B4Q96RC9 309 aa6.72□□□□□ -1.33
CCDC40-215ENST00000576033 WACQ9BTA9 647 aa6.72□□□□□ -1.33
CCDC40-215ENST00000576033 WDR12Q9GZL7 423 aaKnown RBP6.72□□□□□ -1.33
CCDC40-215ENST00000576033 FGF23Q9GZV9 251 aaPredicted RBP6.72□□□□□ -1.33
CCDC40-215ENST00000576033 GSX1Q9H4S2 264 aaPredicted RBP6.72□□□□□ -1.33
CCDC40-215ENST00000576033 NARFLQ9H6Q4 476 aa6.72□□□□□ -1.33
CCDC40-215ENST00000576033 ELOVL3Q9HB03 270 aa6.72□□□□□ -1.33
CCDC40-215ENST00000576033 ACOXLQ9NUZ1 547 aa6.72□□□□□ -1.33
CCDC40-215ENST00000576033 TBCCD1Q9NVR7 557 aa6.72□□□□□ -1.33
CCDC40-215ENST00000576033 FAM206AQ9NX38 181 aa6.72□□□□□ -1.33
CCDC40-215ENST00000576033 ATPIF1Q9UII2 106 aa6.72□□□□□ -1.33
CCDC40-215ENST00000576033 IKZF2Q9UKS7 526 aa6.72□□□□□ -1.33
CCDC40-215ENST00000576033 GTF2A1LQ9UNN4 478 aa6.72□□□□□ -1.33
CCDC40-215ENST00000576033 SLC22A13Q9Y226 551 aa6.72□□□□□ -1.33
CCDC40-215ENST00000576033 SPEF1Q9Y4P9 236 aa6.72□□□□□ -1.33
CCDC40-215ENST00000576033 MTORP42345 2549 aa6.72□□□□□ -1.33
CCDC40-215ENST00000576033 NSD1Q96L73 2696 aaPredicted RBP6.72□□□□□ -1.33
CCDC40-215ENST00000576033 MED13LQ71F56 2210 aa6.71□□□□□ -1.34
CCDC40-215ENST00000576033 hCG_38984A0A1B0GV85 526 aa6.71□□□□□ -1.34
CCDC40-215ENST00000576033 A6NIN4 97 aa6.71□□□□□ -1.34
CCDC40-215ENST00000576033 C17orf100A8MU93 164 aa6.71□□□□□ -1.34
CCDC40-215ENST00000576033 F5H5P2 479 aa6.71□□□□□ -1.34
CCDC40-215ENST00000576033 GABRPO00591 440 aa6.71□□□□□ -1.34
CCDC40-215ENST00000576033 PHYHO14832 338 aa6.71□□□□□ -1.34
CCDC40-215ENST00000576033 RGS9O75916 674 aaPredicted RBP6.71□□□□□ -1.34
CCDC40-215ENST00000576033 IGHV3-13P01766 116 aa6.71□□□□□ -1.34
CCDC40-215ENST00000576033 DAOP14920 347 aa6.71□□□□□ -1.34
CCDC40-215ENST00000576033 COL8A2P25067 703 aa6.71□□□□□ -1.34
CCDC40-215ENST00000576033 ACKR3P25106 362 aa6.71□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms