RNA–Protein interactions for RNA: ENST00000574501.1

SMG6-215, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

Gene SMG6, Length 2,419 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-215ENST00000574501 HIST1H2BMQ99879 126 aa12.79□□□□□ -0.36
SMG6-215ENST00000574501 FOXQ1Q9C009 403 aa12.79□□□□□ -0.36
SMG6-215ENST00000574501 CENPMQ9NSP4 180 aa12.79□□□□□ -0.36
SMG6-215ENST00000574501 LUZP4Q9P127 313 aa12.79□□□□□ -0.36
SMG6-215ENST00000574501 DEDDO75618 318 aa12.78□□□□□ -0.36
SMG6-215ENST00000574501 BPNT1O95861 308 aa12.78□□□□□ -0.36
SMG6-215ENST00000574501 CSF2RAP15509 400 aa12.78□□□□□ -0.36
SMG6-215ENST00000574501 GABRA4P48169 554 aa12.78□□□□□ -0.36
SMG6-215ENST00000574501 DEFB110Q30KQ9 67 aa12.78□□□□□ -0.36
SMG6-215ENST00000574501 SOHLH1Q5JUK2 328 aa12.78□□□□□ -0.36
SMG6-215ENST00000574501 VAX1Q5SQQ9 334 aa12.78□□□□□ -0.36
SMG6-215ENST00000574501 VITQ6UXI7 678 aa12.78□□□□□ -0.36
SMG6-215ENST00000574501 SLC22A24Q8N4F4 322 aa12.78□□□□□ -0.36
SMG6-215ENST00000574501 MFSD8Q8NHS3 518 aa12.78□□□□□ -0.36
SMG6-215ENST00000574501 Q8WTZ3 238 aa12.78□□□□□ -0.36
SMG6-215ENST00000574501 S100A13Q99584 98 aa12.78□□□□□ -0.36
SMG6-215ENST00000574501 ATG2BQ96BY7 2078 aa12.78□□□□□ -0.36
SMG6-215ENST00000574501 SLC31A1O15431 190 aa12.78□□□□□ -0.36
SMG6-215ENST00000574501 TNFSF14O43557 240 aa12.78□□□□□ -0.36
SMG6-215ENST00000574501 FABP4P15090 132 aa12.78□□□□□ -0.36
SMG6-215ENST00000574501 AMY2BP19961 511 aa12.78□□□□□ -0.36
SMG6-215ENST00000574501 CHATP28329 748 aa12.78□□□□□ -0.36
SMG6-215ENST00000574501 CRABP1P29762 137 aa12.78□□□□□ -0.36
SMG6-215ENST00000574501 IGFALSP35858 605 aa12.78□□□□□ -0.36
SMG6-215ENST00000574501 SLC35A1P78382 337 aa12.78□□□□□ -0.36
SMG6-215ENST00000574501 KIR2DS3Q14952 304 aa12.78□□□□□ -0.36
SMG6-215ENST00000574501 GAB4Q2WGN9 574 aa12.78□□□□□ -0.36
SMG6-215ENST00000574501 Q7L0L9 218 aa12.78□□□□□ -0.36
SMG6-215ENST00000574501 COMMD1Q8N668 190 aa12.78□□□□□ -0.36
SMG6-215ENST00000574501 SUMF2Q8NBJ7 301 aa12.78□□□□□ -0.36
SMG6-215ENST00000574501 GALNT14Q96FL9 552 aa12.78□□□□□ -0.36
SMG6-215ENST00000574501 LPAR5Q9H1C0 372 aa12.78□□□□□ -0.36
SMG6-215ENST00000574501 WFDC1Q9HC57 220 aa12.78□□□□□ -0.36
SMG6-215ENST00000574501 UBQLN4Q9NRR5 601 aa12.78□□□□□ -0.36
SMG6-215ENST00000574501 TMEM184BQ9Y519 407 aaPredicted RBP12.78□□□□□ -0.36
SMG6-215ENST00000574501 BCKDHBP21953 392 aa12.77□□□□□ -0.37
SMG6-215ENST00000574501 OR3A2P47893 321 aa12.77□□□□□ -0.37
SMG6-215ENST00000574501 UCP2P55851 309 aa12.77□□□□□ -0.37
SMG6-215ENST00000574501 RAB38P57729 211 aa12.77□□□□□ -0.37
SMG6-215ENST00000574501 RPL27P61353 136 aaKnown RBP12.77□□□□□ -0.37
SMG6-215ENST00000574501 DMRTC1Q5HYR2 192 aa12.77□□□□□ -0.37
SMG6-215ENST00000574501 BEND4Q6ZU67 534 aa12.77□□□□□ -0.37
SMG6-215ENST00000574501 PEG10Q86TG7 708 aaKnown RBP12.77□□□□□ -0.37
SMG6-215ENST00000574501 ZNF440Q8IYI8 595 aa12.77□□□□□ -0.37
SMG6-215ENST00000574501 HSD17B11Q8NBQ5 300 aa12.77□□□□□ -0.37
SMG6-215ENST00000574501 RNASE11Q8TAA1 199 aaKnown RBP12.77□□□□□ -0.37
SMG6-215ENST00000574501 LURAP1Q96LR2 239 aa12.77□□□□□ -0.37
SMG6-215ENST00000574501 APOOQ9BUR5 198 aa12.77□□□□□ -0.37
SMG6-215ENST00000574501 OR11A1Q9GZK7 315 aa12.77□□□□□ -0.37
SMG6-215ENST00000574501 RCL1Q9Y2P8 373 aaKnown RBP12.77□□□□□ -0.37
SMG6-215ENST00000574501 TGIF2-C20orf24A0A0A6YYL0 155 aa12.77□□□□□ -0.37
SMG6-215ENST00000574501 SEC14L6B5MCN3 397 aa12.77□□□□□ -0.37
SMG6-215ENST00000574501 PPP1R2P9O14990 202 aa12.77□□□□□ -0.37
SMG6-215ENST00000574501 TRGC2P03986 189 aa12.77□□□□□ -0.37
SMG6-215ENST00000574501 ISG15P05161 165 aa12.77□□□□□ -0.37
SMG6-215ENST00000574501 HSD11B1P28845 292 aa12.77□□□□□ -0.37
SMG6-215ENST00000574501 PTGER4P35408 488 aa12.77□□□□□ -0.37
SMG6-215ENST00000574501 RABIFP47224 123 aa12.77□□□□□ -0.37
SMG6-215ENST00000574501 TMEM50BP56557 158 aa12.77□□□□□ -0.37
SMG6-215ENST00000574501 PKIAP61925 76 aa12.77□□□□□ -0.37
SMG6-215ENST00000574501 ARFRP1Q13795 201 aa12.77□□□□□ -0.37
SMG6-215ENST00000574501 CST6Q15828 149 aa12.77□□□□□ -0.37
SMG6-215ENST00000574501 PSRC1Q6PGN9 363 aaPredicted RBP12.77□□□□□ -0.37
SMG6-215ENST00000574501 GLIPR1L1Q6UWM5 242 aa12.77□□□□□ -0.37
SMG6-215ENST00000574501 HIST3H2BBQ8N257 126 aa12.77□□□□□ -0.37
SMG6-215ENST00000574501 TMEM156Q8N614 296 aa12.77□□□□□ -0.37
SMG6-215ENST00000574501 APCDD1LQ8NCL9 501 aa12.77□□□□□ -0.37
SMG6-215ENST00000574501 CA5BP1Q8WTZ4 195 aa12.77□□□□□ -0.37
SMG6-215ENST00000574501 ARHGAP5-AS1Q96IT6 56 aa12.77□□□□□ -0.37
SMG6-215ENST00000574501 OR10A5Q9H207 317 aa12.77□□□□□ -0.37
SMG6-215ENST00000574501 S1PR5Q9H228 398 aa12.77□□□□□ -0.37
SMG6-215ENST00000574501 EHFQ9NZC4 300 aa12.77□□□□□ -0.37
SMG6-215ENST00000574501 PISDQ9UG56 409 aa12.77□□□□□ -0.37
SMG6-215ENST00000574501 HS3ST3B1Q9Y662 390 aa12.77□□□□□ -0.37
SMG6-215ENST00000574501 A0A1W2PQU0 124 aa12.76□□□□□ -0.37
SMG6-215ENST00000574501 PRSS38A1L453 326 aa12.76□□□□□ -0.37
SMG6-215ENST00000574501 CEACAM18A8MTB9 384 aa12.76□□□□□ -0.37
SMG6-215ENST00000574501 TMEM14DPA8MWL7 114 aa12.76□□□□□ -0.37
SMG6-215ENST00000574501 ZNF587BE7ETH6 402 aa12.76□□□□□ -0.37
SMG6-215ENST00000574501 TSTD3H0UI37 97 aa12.76□□□□□ -0.37
SMG6-215ENST00000574501 GUSBP08236 651 aa12.76□□□□□ -0.37
SMG6-215ENST00000574501 CXCR1P25024 350 aa12.76□□□□□ -0.37
SMG6-215ENST00000574501 ZNF93P35789 620 aaPredicted RBP12.76□□□□□ -0.37
SMG6-215ENST00000574501 TAGLN2P37802 199 aaKnown RBP12.76□□□□□ -0.37
SMG6-215ENST00000574501 LBX1P52954 281 aa12.76□□□□□ -0.37
SMG6-215ENST00000574501 CASP6P55212 293 aa12.76□□□□□ -0.37
SMG6-215ENST00000574501 SLC26A5P58743 744 aa12.76□□□□□ -0.37
SMG6-215ENST00000574501 ERVFRD-1P60508 538 aa12.76□□□□□ -0.37
SMG6-215ENST00000574501 ELOBQ15370 118 aa12.76□□□□□ -0.37
SMG6-215ENST00000574501 VWCEQ96DN2 955 aa12.76□□□□□ -0.37
SMG6-215ENST00000574501 PBDC1Q9BVG4 233 aa12.76□□□□□ -0.37
SMG6-215ENST00000574501 RTN4RQ9BZR6 473 aa12.76□□□□□ -0.37
SMG6-215ENST00000574501 SCDO00767 359 aa12.76□□□□□ -0.37
SMG6-215ENST00000574501 BCAT2O15382 392 aaPredicted RBP12.76□□□□□ -0.37
SMG6-215ENST00000574501 CYB5BO43169 146 aa12.76□□□□□ -0.37
SMG6-215ENST00000574501 BGLAPP02818 100 aa12.76□□□□□ -0.37
SMG6-215ENST00000574501 HIST1H1DP16402 221 aaKnown RBP12.76□□□□□ -0.37
SMG6-215ENST00000574501 KLK2P20151 261 aa12.76□□□□□ -0.37
SMG6-215ENST00000574501 RBMXP38159 391 aaKnown RBP12.76□□□□□ -0.37
SMG6-215ENST00000574501 PPP1CAP62136 330 aa12.76□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms