RNA–Protein interactions for RNA: ENST00000567698.1

SHCBP1-206, Transcript of SHC binding and spindle associated 1, humanhuman

TSL 2

Gene SHCBP1, Length 535 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHCBP1-206ENST00000567698 RPEL1Q2QD12 228 aa2.49□□□□□ -2.01
SHCBP1-206ENST00000567698 RNASE13Q5GAN3 156 aaKnown RBP2.49□□□□□ -2.01
SHCBP1-206ENST00000567698 ZNF470Q6ECI4 717 aa2.49□□□□□ -2.01
SHCBP1-206ENST00000567698 LINC00336Q6ZUF6 198 aa2.49□□□□□ -2.01
SHCBP1-206ENST00000567698 MBOAT2Q6ZWT7 520 aa2.49□□□□□ -2.01
SHCBP1-206ENST00000567698 PID1Q7Z2X4 250 aa2.49□□□□□ -2.01
SHCBP1-206ENST00000567698 LYPD1Q8N2G4 141 aa2.49□□□□□ -2.01
SHCBP1-206ENST00000567698 CYB561A3Q8NBI2 242 aa2.49□□□□□ -2.01
SHCBP1-206ENST00000567698 CHST4Q8NCG5 386 aa2.49□□□□□ -2.01
SHCBP1-206ENST00000567698 OR4D6Q8NGJ1 314 aa2.49□□□□□ -2.01
SHCBP1-206ENST00000567698 TCP10LQ8TDR4 215 aa2.49□□□□□ -2.01
SHCBP1-206ENST00000567698 LRRC29Q8WV35 223 aa2.49□□□□□ -2.01
SHCBP1-206ENST00000567698 ECHDC3Q96DC8 303 aa2.49□□□□□ -2.01
SHCBP1-206ENST00000567698 LINC00477Q96M19 166 aa2.49□□□□□ -2.01
SHCBP1-206ENST00000567698 XPO6Q96QU8 1125 aaKnown RBP2.49□□□□□ -2.01
SHCBP1-206ENST00000567698 TIMM29Q9BSF4 260 aa2.49□□□□□ -2.01
SHCBP1-206ENST00000567698 OSBPL11Q9BXB4 747 aa2.49□□□□□ -2.01
SHCBP1-206ENST00000567698 MAP1LC3CQ9BXW4 147 aa2.49□□□□□ -2.01
SHCBP1-206ENST00000567698 ULBP2Q9BZM5 246 aa2.49□□□□□ -2.01
SHCBP1-206ENST00000567698 ACTR3CQ9C0K3 210 aaPredicted RBP2.49□□□□□ -2.01
SHCBP1-206ENST00000567698 CHRNA10Q9GZZ6 450 aa2.49□□□□□ -2.01
SHCBP1-206ENST00000567698 BEX1Q9HBH7 125 aa2.49□□□□□ -2.01
SHCBP1-206ENST00000567698 C8orf17Q9NRJ1 99 aa2.49□□□□□ -2.01
SHCBP1-206ENST00000567698 SAMSN1Q9NSI8 373 aaKnown RBP2.49□□□□□ -2.01
SHCBP1-206ENST00000567698 FLVCR2Q9UPI3 526 aa2.49□□□□□ -2.01
SHCBP1-206ENST00000567698 UBN2Q6ZU65 1347 aa2.48□□□□□ -2.01
SHCBP1-206ENST00000567698 A0A0J9YXV3 536 aa2.48□□□□□ -2.01
SHCBP1-206ENST00000567698 RAB19A4D1S5 217 aa2.48□□□□□ -2.01
SHCBP1-206ENST00000567698 TRPC5OSA6NMA1 111 aa2.48□□□□□ -2.01
SHCBP1-206ENST00000567698 H7C1H1 209 aa2.48□□□□□ -2.01
SHCBP1-206ENST00000567698 RFXANKO14593 260 aa2.48□□□□□ -2.01
SHCBP1-206ENST00000567698 SCN2BO60939 215 aa2.48□□□□□ -2.01
SHCBP1-206ENST00000567698 RDH16O75452 317 aa2.48□□□□□ -2.01
SHCBP1-206ENST00000567698 KLHL2O95198 593 aa2.48□□□□□ -2.01
SHCBP1-206ENST00000567698 ETHE1O95571 254 aa2.48□□□□□ -2.01
SHCBP1-206ENST00000567698 HLA-HP01893 362 aa2.48□□□□□ -2.01
SHCBP1-206ENST00000567698 ZNF806P0C7X5 589 aa2.48□□□□□ -2.01
SHCBP1-206ENST00000567698 PMCHP20382 165 aa2.48□□□□□ -2.01
SHCBP1-206ENST00000567698 ATP6V0D1P61421 351 aa2.48□□□□□ -2.01
SHCBP1-206ENST00000567698 UBE2IP63279 158 aaKnown RBP2.48□□□□□ -2.01
SHCBP1-206ENST00000567698 STX3Q13277 289 aa2.48□□□□□ -2.01
SHCBP1-206ENST00000567698 SLAMF1Q13291 335 aa2.48□□□□□ -2.01
SHCBP1-206ENST00000567698 ANGPT1Q15389 498 aa2.48□□□□□ -2.01
SHCBP1-206ENST00000567698 USF2Q15853 346 aaPredicted RBP2.48□□□□□ -2.01
SHCBP1-206ENST00000567698 GABRA6Q16445 453 aa2.48□□□□□ -2.01
SHCBP1-206ENST00000567698 APOBEC3HQ6NTF7 200 aaKnown RBP2.48□□□□□ -2.01
SHCBP1-206ENST00000567698 ZFP1Q6P2D0 407 aa2.48□□□□□ -2.01
SHCBP1-206ENST00000567698 ULK3Q6PHR2 472 aa2.48□□□□□ -2.01
SHCBP1-206ENST00000567698 NEGR1Q7Z3B1 354 aa2.48□□□□□ -2.01
SHCBP1-206ENST00000567698 SNX20Q7Z614 316 aa2.48□□□□□ -2.01
SHCBP1-206ENST00000567698 MYOCDQ8IZQ8 938 aa2.48□□□□□ -2.01
SHCBP1-206ENST00000567698 ARHGAP18Q8N392 663 aa2.48□□□□□ -2.01
SHCBP1-206ENST00000567698 TRAM1L1Q8N609 369 aa2.48□□□□□ -2.01
SHCBP1-206ENST00000567698 ZNF565Q8N9K5 539 aa2.48□□□□□ -2.01
SHCBP1-206ENST00000567698 TTC29Q8NA56 475 aaPredicted RBP2.48□□□□□ -2.01
SHCBP1-206ENST00000567698 INO80EQ8NBZ0 244 aaPredicted RBP2.48□□□□□ -2.01
SHCBP1-206ENST00000567698 ZNF721Q8TF20 911 aa2.48□□□□□ -2.01
SHCBP1-206ENST00000567698 JSRP1Q96MG2 331 aaPredicted RBP2.48□□□□□ -2.01
SHCBP1-206ENST00000567698 FAM210AQ96ND0 272 aa2.48□□□□□ -2.01
SHCBP1-206ENST00000567698 NAA50Q9GZZ1 169 aaKnown RBP2.48□□□□□ -2.01
SHCBP1-206ENST00000567698 GOLPH3Q9H4A6 298 aa2.48□□□□□ -2.01
SHCBP1-206ENST00000567698 TMEM38AQ9H6F2 299 aa2.48□□□□□ -2.01
SHCBP1-206ENST00000567698 ACP6Q9NPH0 428 aa2.48□□□□□ -2.01
SHCBP1-206ENST00000567698 MRM2Q9UI43 246 aaKnown RBP2.48□□□□□ -2.01
SHCBP1-206ENST00000567698 ADGRA3Q8IWK6 1321 aa2.47□□□□□ -2.01
SHCBP1-206ENST00000567698 PCDH11XQ9BZA7 1347 aa2.47□□□□□ -2.01
SHCBP1-206ENST00000567698 IGLV3-12A0A075B6K2 115 aa2.47□□□□□ -2.01
SHCBP1-206ENST00000567698 A0A1B0GW15 77 aa2.47□□□□□ -2.01
SHCBP1-206ENST00000567698 A0A1W2PRD5 423 aa2.47□□□□□ -2.01
SHCBP1-206ENST00000567698 ZNF850A8MQ14 1090 aa2.47□□□□□ -2.01
SHCBP1-206ENST00000567698 KRBOX1C9JBD0 128 aa2.47□□□□□ -2.01
SHCBP1-206ENST00000567698 SLC9A3R1O14745 358 aaPredicted RBP2.47□□□□□ -2.01
SHCBP1-206ENST00000567698 CALUO43852 315 aaPredicted RBP2.47□□□□□ -2.01
SHCBP1-206ENST00000567698 FARS2O95363 451 aaKnown RBP2.47□□□□□ -2.01
SHCBP1-206ENST00000567698 CST4P01036 141 aa2.47□□□□□ -2.01
SHCBP1-206ENST00000567698 PSMB6P28072 239 aa2.47□□□□□ -2.01
SHCBP1-206ENST00000567698 CRATP43155 626 aa2.47□□□□□ -2.01
SHCBP1-206ENST00000567698 CDKN2DP55273 166 aa2.47□□□□□ -2.01
SHCBP1-206ENST00000567698 OR2B6P58173 313 aa2.47□□□□□ -2.01
SHCBP1-206ENST00000567698 RPS23P62266 143 aaKnown RBP2.47□□□□□ -2.01
SHCBP1-206ENST00000567698 SKP1P63208 163 aa2.47□□□□□ -2.01
SHCBP1-206ENST00000567698 CRADDP78560 199 aa2.47□□□□□ -2.01
SHCBP1-206ENST00000567698 CDK5Q00535 292 aa2.47□□□□□ -2.01
SHCBP1-206ENST00000567698 ZNF616Q08AN1 781 aa2.47□□□□□ -2.01
SHCBP1-206ENST00000567698 PMS2P3Q13401 168 aa2.47□□□□□ -2.01
SHCBP1-206ENST00000567698 VAMP3Q15836 100 aa2.47□□□□□ -2.01
SHCBP1-206ENST00000567698 TRMT10CQ7L0Y3 403 aaKnown RBP2.47□□□□□ -2.01
SHCBP1-206ENST00000567698 ARRDC1Q8N5I2 433 aa2.47□□□□□ -2.01
SHCBP1-206ENST00000567698 JAGN1Q8N5M9 183 aa2.47□□□□□ -2.01
SHCBP1-206ENST00000567698 OR7G1Q8NGA0 311 aa2.47□□□□□ -2.01
SHCBP1-206ENST00000567698 APH1BQ8WW43 257 aa2.47□□□□□ -2.01
SHCBP1-206ENST00000567698 BAALCQ8WXS3 180 aa2.47□□□□□ -2.01
SHCBP1-206ENST00000567698 TFGQ92734 400 aaPredicted RBP2.47□□□□□ -2.01
SHCBP1-206ENST00000567698 APH1AQ96BI3 265 aa2.47□□□□□ -2.01
SHCBP1-206ENST00000567698 DCPSQ96C86 337 aaKnown RBP2.47□□□□□ -2.01
SHCBP1-206ENST00000567698 RMI2Q96E14 147 aa2.47□□□□□ -2.01
SHCBP1-206ENST00000567698 C9orf72Q96LT7 481 aa2.47□□□□□ -2.01
SHCBP1-206ENST00000567698 GLT1D1Q96MS3 346 aa2.47□□□□□ -2.01
SHCBP1-206ENST00000567698 DOK1Q99704 481 aa2.47□□□□□ -2.01
SHCBP1-206ENST00000567698 GGTLC1Q9BX51 225 aa2.47□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms