RNA–Protein interactions for RNA: ENST00000566843.1

COMMD4-215, Transcript of COMM domain containing 4, humanhuman

TSL 2

Gene COMMD4, Length 2,284 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-215ENST00000566843 SOX1O00570 391 aaPredicted RBP13.88□□□□□ -0.19
COMMD4-215ENST00000566843 TSPAN2O60636 221 aa13.88□□□□□ -0.19
COMMD4-215ENST00000566843 CDC14BO60729 498 aa13.88□□□□□ -0.19
COMMD4-215ENST00000566843 AHSA1O95433 338 aa13.88□□□□□ -0.19
COMMD4-215ENST00000566843 IGKV3-11P04433 115 aa13.88□□□□□ -0.19
COMMD4-215ENST00000566843 FBP1P09467 338 aa13.88□□□□□ -0.19
COMMD4-215ENST00000566843 PRF1P14222 555 aa13.88□□□□□ -0.19
COMMD4-215ENST00000566843 OR5AS1Q8N127 324 aa13.88□□□□□ -0.19
COMMD4-215ENST00000566843 TMEM104Q8NE00 496 aa13.88□□□□□ -0.19
COMMD4-215ENST00000566843 EMG1Q92979 244 aaKnown RBP13.88□□□□□ -0.19
COMMD4-215ENST00000566843 FBXO17Q96EF6 278 aa13.88□□□□□ -0.19
COMMD4-215ENST00000566843 KCNK17Q96T54 332 aa13.88□□□□□ -0.19
COMMD4-215ENST00000566843 IER2Q9BTL4 223 aa13.88□□□□□ -0.19
COMMD4-215ENST00000566843 PNO1Q9NRX1 252 aaKnown RBP13.88□□□□□ -0.19
COMMD4-215ENST00000566843 GSKIPQ9P0R6 139 aa13.88□□□□□ -0.19
COMMD4-215ENST00000566843 FBXL17Q9UF56 701 aa13.88□□□□□ -0.19
COMMD4-215ENST00000566843 MRPS28Q9Y2Q9 187 aaKnown RBP13.88□□□□□ -0.19
COMMD4-215ENST00000566843 MS4A18H0YCH9 400 aa13.87□□□□□ -0.19
COMMD4-215ENST00000566843 AP4M1O00189 453 aa13.87□□□□□ -0.19
COMMD4-215ENST00000566843 ZNF354AO60765 605 aaPredicted RBP13.87□□□□□ -0.19
COMMD4-215ENST00000566843 NUDT14O95848 222 aa13.87□□□□□ -0.19
COMMD4-215ENST00000566843 MPIG6BO95866 241 aa13.87□□□□□ -0.19
COMMD4-215ENST00000566843 SNRNP70P08621 437 aaKnown RBP13.87□□□□□ -0.19
COMMD4-215ENST00000566843 BCKDHBP21953 392 aa13.87□□□□□ -0.19
COMMD4-215ENST00000566843 GLRA1P23415 457 aa13.87□□□□□ -0.19
COMMD4-215ENST00000566843 LAP3P28838 519 aa13.87□□□□□ -0.19
COMMD4-215ENST00000566843 FCGR2CP31995 323 aa13.87□□□□□ -0.19
COMMD4-215ENST00000566843 ZNF84P51523 738 aa13.87□□□□□ -0.19
COMMD4-215ENST00000566843 SURF2Q15527 256 aaPredicted RBP13.87□□□□□ -0.19
COMMD4-215ENST00000566843 MS4A18Q3C1V0 323 aa13.87□□□□□ -0.19
COMMD4-215ENST00000566843 GRINAQ7Z429 371 aa13.87□□□□□ -0.19
COMMD4-215ENST00000566843 FAM219AQ8IW50 185 aa13.87□□□□□ -0.19
COMMD4-215ENST00000566843 OR9K2Q8NGE7 335 aa13.87□□□□□ -0.19
COMMD4-215ENST00000566843 SLAMF6Q96DU3 332 aa13.87□□□□□ -0.19
COMMD4-215ENST00000566843 TMEM41AQ96HV5 264 aa13.87□□□□□ -0.19
COMMD4-215ENST00000566843 GAS2L1Q99501 681 aaPredicted RBP13.87□□□□□ -0.19
COMMD4-215ENST00000566843 TMPRSS5Q9H3S3 457 aa13.87□□□□□ -0.19
COMMD4-215ENST00000566843 RGCCQ9H4X1 137 aa13.87□□□□□ -0.19
COMMD4-215ENST00000566843 LMAN1LQ9HAT1 526 aa13.87□□□□□ -0.19
COMMD4-215ENST00000566843 LANCL2Q9NS86 450 aa13.87□□□□□ -0.19
COMMD4-215ENST00000566843 CUTCQ9NTM9 273 aa13.87□□□□□ -0.19
COMMD4-215ENST00000566843 B3GALT5Q9Y2C3 310 aa13.87□□□□□ -0.19
COMMD4-215ENST00000566843 AMDHD2Q9Y303 409 aa13.87□□□□□ -0.19
COMMD4-215ENST00000566843 IGKV1D-43A0A0B4J1Z2 117 aa13.87□□□□□ -0.19
COMMD4-215ENST00000566843 K7EPK0 472 aa13.87□□□□□ -0.19
COMMD4-215ENST00000566843 PPIHO43447 177 aaKnown RBP13.87□□□□□ -0.19
COMMD4-215ENST00000566843 CELA2BP08218 269 aaPredicted RBP13.87□□□□□ -0.19
COMMD4-215ENST00000566843 HOXB5P09067 269 aa13.87□□□□□ -0.19
COMMD4-215ENST00000566843 AMY2BP19961 511 aa13.87□□□□□ -0.19
COMMD4-215ENST00000566843 GABRA4P48169 554 aa13.87□□□□□ -0.19
COMMD4-215ENST00000566843 FAM189A2Q15884 450 aa13.87□□□□□ -0.19
COMMD4-215ENST00000566843 ACER2Q5QJU3 275 aa13.87□□□□□ -0.19
COMMD4-215ENST00000566843 KLHL24Q6TFL4 600 aa13.87□□□□□ -0.19
COMMD4-215ENST00000566843 Q6ZSR6 202 aa13.87□□□□□ -0.19
COMMD4-215ENST00000566843 WDFY1Q8IWB7 410 aa13.87□□□□□ -0.19
COMMD4-215ENST00000566843 FAM71E2Q8N5Q1 922 aa13.87□□□□□ -0.19
COMMD4-215ENST00000566843 METTL27Q8N6F8 245 aaPredicted RBP13.87□□□□□ -0.19
COMMD4-215ENST00000566843 UBAC2Q8NBM4 344 aa13.87□□□□□ -0.19
COMMD4-215ENST00000566843 GPR119Q8TDV5 335 aa13.87□□□□□ -0.19
COMMD4-215ENST00000566843 ZNF721Q8TF20 911 aa13.87□□□□□ -0.19
COMMD4-215ENST00000566843 IP6K3Q96PC2 410 aa13.87□□□□□ -0.19
COMMD4-215ENST00000566843 OR11A1Q9GZK7 315 aa13.87□□□□□ -0.19
COMMD4-215ENST00000566843 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP13.87□□□□□ -0.19
COMMD4-215ENST00000566843 TUBD1Q9UJT1 453 aa13.87□□□□□ -0.19
COMMD4-215ENST00000566843 NPIPB13A6NJU9 1138 aa13.86□□□□□ -0.19
COMMD4-215ENST00000566843 NPIPB4C9JG80 1138 aa13.86□□□□□ -0.19
COMMD4-215ENST00000566843 DEDDO75618 318 aa13.86□□□□□ -0.19
COMMD4-215ENST00000566843 HTR3BO95264 441 aa13.86□□□□□ -0.19
COMMD4-215ENST00000566843 DDAH2O95865 285 aa13.86□□□□□ -0.19
COMMD4-215ENST00000566843 IL12BP29460 328 aa13.86□□□□□ -0.19
COMMD4-215ENST00000566843 DCAF7P61962 342 aa13.86□□□□□ -0.19
COMMD4-215ENST00000566843 PARM1Q6UWI2 310 aa13.86□□□□□ -0.19
COMMD4-215ENST00000566843 C1QL4Q86Z23 238 aa13.86□□□□□ -0.19
COMMD4-215ENST00000566843 ZNF248Q8NDW4 579 aa13.86□□□□□ -0.19
COMMD4-215ENST00000566843 OR56B1Q8NGI3 324 aa13.86□□□□□ -0.19
COMMD4-215ENST00000566843 FGF14Q92915 247 aa13.86□□□□□ -0.19
COMMD4-215ENST00000566843 RPP25Q9BUL9 199 aaKnown RBP13.86□□□□□ -0.19
COMMD4-215ENST00000566843 OR8D2Q9GZM6 311 aa13.86□□□□□ -0.19
COMMD4-215ENST00000566843 BRWD1Q9NSI6 2320 aa13.86□□□□□ -0.19
COMMD4-215ENST00000566843 TXNL1O43396 289 aa13.85□□□□□ -0.19
COMMD4-215ENST00000566843 TSPAN15O95858 294 aa13.85□□□□□ -0.19
COMMD4-215ENST00000566843 SFTPBP07988 381 aa13.85□□□□□ -0.19
COMMD4-215ENST00000566843 HOXB2P14652 356 aa13.85□□□□□ -0.19
COMMD4-215ENST00000566843 NQO2P16083 231 aa13.85□□□□□ -0.19
COMMD4-215ENST00000566843 LMO1P25800 156 aa13.85□□□□□ -0.19
COMMD4-215ENST00000566843 TMEM33P57088 247 aa13.85□□□□□ -0.19
COMMD4-215ENST00000566843 TAS2R46P59540 309 aa13.85□□□□□ -0.19
COMMD4-215ENST00000566843 HHEXQ03014 270 aa13.85□□□□□ -0.19
COMMD4-215ENST00000566843 RHEBQ15382 184 aa13.85□□□□□ -0.19
COMMD4-215ENST00000566843 GUK1Q16774 197 aa13.85□□□□□ -0.19
COMMD4-215ENST00000566843 KRBOX4Q5JUW0 171 aa13.85□□□□□ -0.19
COMMD4-215ENST00000566843 OR10S1Q8NGN2 331 aa13.85□□□□□ -0.19
COMMD4-215ENST00000566843 ISOC2Q96AB3 205 aa13.85□□□□□ -0.19
COMMD4-215ENST00000566843 TCTN2Q96GX1 697 aa13.85□□□□□ -0.19
COMMD4-215ENST00000566843 ARHGAP5-AS1Q96IT6 56 aa13.85□□□□□ -0.19
COMMD4-215ENST00000566843 PRRX2Q99811 253 aa13.85□□□□□ -0.19
COMMD4-215ENST00000566843 TMEM59Q9BXS4 323 aa13.85□□□□□ -0.19
COMMD4-215ENST00000566843 TBL1XR1Q9BZK7 514 aa13.85□□□□□ -0.19
COMMD4-215ENST00000566843 C8orf33Q9H7E9 229 aaPredicted RBP13.85□□□□□ -0.19
COMMD4-215ENST00000566843 FAM212BQ9NTI7 297 aaPredicted RBP13.85□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms