RNA–Protein interactions for RNA: ENST00000566221.5

SPG7-213, Transcript of SPG7, paraplegin matrix AAA peptidase subunit, humanhuman

TSL 3

Gene SPG7, Length 734 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7-213ENST00000566221 H3BSH0 61 aa12.66□□□□□ -0.38
SPG7-213ENST00000566221 SLC22A1O15245 554 aa12.66□□□□□ -0.38
SPG7-213ENST00000566221 AIREO43918 545 aa12.66□□□□□ -0.38
SPG7-213ENST00000566221 SERPINA3P01011 423 aa12.66□□□□□ -0.38
SPG7-213ENST00000566221 HLA-DPB1P04440 258 aa12.66□□□□□ -0.38
SPG7-213ENST00000566221 ACKR3P25106 362 aa12.66□□□□□ -0.38
SPG7-213ENST00000566221 RIPPLY1Q0D2K3 151 aa12.66□□□□□ -0.38
SPG7-213ENST00000566221 TNK1Q13470 666 aa12.66□□□□□ -0.38
SPG7-213ENST00000566221 SSX1Q16384 188 aa12.66□□□□□ -0.38
SPG7-213ENST00000566221 ZMAT1Q5H9K5 638 aa12.66□□□□□ -0.38
SPG7-213ENST00000566221 TMEM255AQ5JRV8 349 aa12.66□□□□□ -0.38
SPG7-213ENST00000566221 AGAP6Q5VW22 663 aa12.66□□□□□ -0.38
SPG7-213ENST00000566221 C20orf204Q6ZNR8 217 aa12.66□□□□□ -0.38
SPG7-213ENST00000566221 LRP11Q86VZ4 500 aa12.66□□□□□ -0.38
SPG7-213ENST00000566221 BHLHE23Q8NDY6 225 aa12.66□□□□□ -0.38
SPG7-213ENST00000566221 OR51A4Q8NGJ6 313 aa12.66□□□□□ -0.38
SPG7-213ENST00000566221 OR14K1Q8NGZ2 314 aa12.66□□□□□ -0.38
SPG7-213ENST00000566221 C10orf35Q96D05 121 aa12.66□□□□□ -0.38
SPG7-213ENST00000566221 SOX7Q9BT81 388 aa12.66□□□□□ -0.38
SPG7-213ENST00000566221 TMED9Q9BVK6 235 aa12.66□□□□□ -0.38
SPG7-213ENST00000566221 MYEF2Q9P2K5 600 aaKnown RBP12.66□□□□□ -0.38
SPG7-213ENST00000566221 FBXO9Q9UK97 447 aaPredicted RBP12.66□□□□□ -0.38
SPG7-213ENST00000566221 STUB1Q9UNE7 303 aa12.66□□□□□ -0.38
SPG7-213ENST00000566221 SSR3Q9UNL2 185 aa12.66□□□□□ -0.38
SPG7-213ENST00000566221 DHDHQ9UQ10 334 aa12.66□□□□□ -0.38
SPG7-213ENST00000566221 PIGLQ9Y2B2 252 aa12.66□□□□□ -0.38
SPG7-213ENST00000566221 FBN2P35556 2912 aa12.65□□□□□ -0.38
SPG7-213ENST00000566221 TRBV5-5A0A0J9YX44 114 aa12.65□□□□□ -0.38
SPG7-213ENST00000566221 ZNF816-ZNF321PA0A0X1KG74 233 aa12.65□□□□□ -0.38
SPG7-213ENST00000566221 TRDV1A0A1B0GX56 115 aa12.65□□□□□ -0.38
SPG7-213ENST00000566221 PLSCR5A0PG75 271 aa12.65□□□□□ -0.38
SPG7-213ENST00000566221 TRIM64BA6NI03 449 aa12.65□□□□□ -0.38
SPG7-213ENST00000566221 CD2P06729 351 aa12.65□□□□□ -0.38
SPG7-213ENST00000566221 OCM2P0CE71 109 aa12.65□□□□□ -0.38
SPG7-213ENST00000566221 ZNF20P17024 532 aa12.65□□□□□ -0.38
SPG7-213ENST00000566221 MAPK3P27361 379 aaPredicted RBP12.65□□□□□ -0.38
SPG7-213ENST00000566221 RPS11P62280 158 aaKnown RBP eCLIP12.65□□□□□ -0.38
SPG7-213ENST00000566221 SNRPD2P62316 118 aaKnown RBP12.65□□□□□ -0.38
SPG7-213ENST00000566221 RPS25P62851 125 aaKnown RBP12.65□□□□□ -0.38
SPG7-213ENST00000566221 NKPD1Q17RQ9 610 aa12.65□□□□□ -0.38
SPG7-213ENST00000566221 ALKBH6Q3KRA9 238 aa12.65□□□□□ -0.38
SPG7-213ENST00000566221 Q499Y3 187 aa12.65□□□□□ -0.38
SPG7-213ENST00000566221 FOXB2Q5VYV0 432 aa12.65□□□□□ -0.38
SPG7-213ENST00000566221 CD200R1LQ6Q8B3 271 aa12.65□□□□□ -0.38
SPG7-213ENST00000566221 PAMR1Q6UXH9 720 aa12.65□□□□□ -0.38
SPG7-213ENST00000566221 DTX2Q86UW9 622 aa12.65□□□□□ -0.38
SPG7-213ENST00000566221 OR5AS1Q8N127 324 aa12.65□□□□□ -0.38
SPG7-213ENST00000566221 OR8G5Q8NG78 346 aa12.65□□□□□ -0.38
SPG7-213ENST00000566221 OR13C5Q8NGS8 318 aa12.65□□□□□ -0.38
SPG7-213ENST00000566221 PHYHIPQ92561 330 aa12.65□□□□□ -0.38
SPG7-213ENST00000566221 PLEKHF2Q9H8W4 249 aa12.65□□□□□ -0.38
SPG7-213ENST00000566221 CYSLTR2Q9NS75 346 aa12.65□□□□□ -0.38
SPG7-213ENST00000566221 CBLN4Q9NTU7 201 aa12.65□□□□□ -0.38
SPG7-213ENST00000566221 MRPL15Q9P015 296 aaKnown RBP12.65□□□□□ -0.38
SPG7-213ENST00000566221 TAAR3PQ9P1P4 343 aa12.65□□□□□ -0.38
SPG7-213ENST00000566221 SF3B6Q9Y3B4 125 aaKnown RBP12.65□□□□□ -0.38
SPG7-213ENST00000566221 NOP16Q9Y3C1 178 aaKnown RBP12.65□□□□□ -0.38
SPG7-213ENST00000566221 TANC2Q9HCD6 1990 aa12.65□□□□□ -0.38
SPG7-213ENST00000566221 SPG11Q96JI7 2443 aa12.64□□□□□ -0.39
SPG7-213ENST00000566221 ANKRD30BLA7E2S9 258 aa12.64□□□□□ -0.39
SPG7-213ENST00000566221 M0R233 179 aa12.64□□□□□ -0.39
SPG7-213ENST00000566221 RGS9O75916 674 aaPredicted RBP12.64□□□□□ -0.39
SPG7-213ENST00000566221 DANCRP0C864 163 aa12.64□□□□□ -0.39
SPG7-213ENST00000566221 FAHP16930 419 aa12.64□□□□□ -0.39
SPG7-213ENST00000566221 FGF9P31371 208 aaPredicted RBP12.64□□□□□ -0.39
SPG7-213ENST00000566221 MMP15P51511 669 aa12.64□□□□□ -0.39
SPG7-213ENST00000566221 CTF1Q16619 201 aa12.64□□□□□ -0.39
SPG7-213ENST00000566221 SWI5Q1ZZU3 235 aa12.64□□□□□ -0.39
SPG7-213ENST00000566221 SLC16A12Q6ZSM3 486 aa12.64□□□□□ -0.39
SPG7-213ENST00000566221 PP6455Q8WZ26 134 aa12.64□□□□□ -0.39
SPG7-213ENST00000566221 PIGTQ969N2 578 aa12.64□□□□□ -0.39
SPG7-213ENST00000566221 OR14A2Q96R54 314 aa12.64□□□□□ -0.39
SPG7-213ENST00000566221 PAPOLGQ9BWT3 736 aaKnown RBP12.64□□□□□ -0.39
SPG7-213ENST00000566221 SLC22A4Q9H015 551 aa12.64□□□□□ -0.39
SPG7-213ENST00000566221 ABCB9Q9NP78 766 aa12.64□□□□□ -0.39
SPG7-213ENST00000566221 DYNLRB1Q9NP97 96 aa12.64□□□□□ -0.39
SPG7-213ENST00000566221 ZNF275Q9NSD4 429 aaPredicted RBP12.64□□□□□ -0.39
SPG7-213ENST00000566221 GSTK1Q9Y2Q3 226 aa12.64□□□□□ -0.39
SPG7-213ENST00000566221 ZNF879B4DU55 563 aa12.63□□□□□ -0.39
SPG7-213ENST00000566221 H3BMQ9 156 aa12.63□□□□□ -0.39
SPG7-213ENST00000566221 LMX1BO60663 402 aa12.63□□□□□ -0.39
SPG7-213ENST00000566221 LILRA1O75019 489 aa12.63□□□□□ -0.39
SPG7-213ENST00000566221 GATBO75879 557 aaKnown RBP12.63□□□□□ -0.39
SPG7-213ENST00000566221 CST4P01036 141 aa12.63□□□□□ -0.39
SPG7-213ENST00000566221 GADD45AP24522 165 aa12.63□□□□□ -0.39
SPG7-213ENST00000566221 GNALP38405 381 aa12.63□□□□□ -0.39
SPG7-213ENST00000566221 CRYBB2P43320 205 aa12.63□□□□□ -0.39
SPG7-213ENST00000566221 SOX2P48431 317 aa12.63□□□□□ -0.39
SPG7-213ENST00000566221 MST1LQ2TV78 715 aa12.63□□□□□ -0.39
SPG7-213ENST00000566221 CLVS2Q5SYC1 327 aa12.63□□□□□ -0.39
SPG7-213ENST00000566221 C11orf71Q6IPW1 123 aa12.63□□□□□ -0.39
SPG7-213ENST00000566221 KRT74Q7RTS7 529 aa12.63□□□□□ -0.39
SPG7-213ENST00000566221 TMEM203Q969S6 136 aa12.63□□□□□ -0.39
SPG7-213ENST00000566221 TMEM106AQ96A25 262 aa12.63□□□□□ -0.39
SPG7-213ENST00000566221 C12orf43Q96C57 262 aaKnown RBP12.63□□□□□ -0.39
SPG7-213ENST00000566221 ADAT3Q96EY9 351 aaPredicted RBP12.63□□□□□ -0.39
SPG7-213ENST00000566221 SLC30A2Q9BRI3 323 aa12.63□□□□□ -0.39
SPG7-213ENST00000566221 ADAT1Q9BUB4 502 aaKnown RBP12.63□□□□□ -0.39
SPG7-213ENST00000566221 TRAF4Q9BUZ4 470 aaPredicted RBP12.63□□□□□ -0.39
SPG7-213ENST00000566221 RHBDD3Q9Y3P4 386 aa12.63□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms