RNA–Protein interactions for RNA: ENST00000565810.1

CDH1-208, Transcript of cadherin 1, humanhuman

TSL 3

Gene CDH1, Length 282 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-208ENST00000565810 A0A1W2PPK0 400 aa6.66□□□□□ -1.34
CDH1-208ENST00000565810 ANKRD61A6NGH8 418 aa6.66□□□□□ -1.34
CDH1-208ENST00000565810 A6NIN4 97 aa6.66□□□□□ -1.34
CDH1-208ENST00000565810 ZNF850A8MQ14 1090 aa6.66□□□□□ -1.34
CDH1-208ENST00000565810 M0R233 179 aa6.66□□□□□ -1.34
CDH1-208ENST00000565810 GABRPO00591 440 aa6.66□□□□□ -1.34
CDH1-208ENST00000565810 MAGEB3O15480 346 aa6.66□□□□□ -1.34
CDH1-208ENST00000565810 AIREO43918 545 aa6.66□□□□□ -1.34
CDH1-208ENST00000565810 CST4P01036 141 aa6.66□□□□□ -1.34
CDH1-208ENST00000565810 NRASP01111 189 aa6.66□□□□□ -1.34
CDH1-208ENST00000565810 ERCC1P07992 297 aaPredicted RBP6.66□□□□□ -1.34
CDH1-208ENST00000565810 FAHP16930 419 aa6.66□□□□□ -1.34
CDH1-208ENST00000565810 TNFSF4P23510 183 aa6.66□□□□□ -1.34
CDH1-208ENST00000565810 ACKR3P25106 362 aa6.66□□□□□ -1.34
CDH1-208ENST00000565810 TGFBR2P37173 567 aa6.66□□□□□ -1.34
CDH1-208ENST00000565810 MAGEB1P43366 347 aa6.66□□□□□ -1.34
CDH1-208ENST00000565810 ZNF81P51508 661 aa6.66□□□□□ -1.34
CDH1-208ENST00000565810 PRSS12P56730 875 aa6.66□□□□□ -1.34
CDH1-208ENST00000565810 RPS11P62280 158 aaKnown RBP eCLIP6.66□□□□□ -1.34
CDH1-208ENST00000565810 FABP5Q01469 135 aa6.66□□□□□ -1.34
CDH1-208ENST00000565810 CNN3Q15417 329 aaKnown RBP6.66□□□□□ -1.34
CDH1-208ENST00000565810 OR8G1Q15617 311 aa6.66□□□□□ -1.34
CDH1-208ENST00000565810 MSMPQ1L6U9 139 aa6.66□□□□□ -1.34
CDH1-208ENST00000565810 ALKBH6Q3KRA9 238 aa6.66□□□□□ -1.34
CDH1-208ENST00000565810 UNQ9370/PRO34162Q6UXP9 181 aa6.66□□□□□ -1.34
CDH1-208ENST00000565810 MOB3CQ70IA8 216 aa6.66□□□□□ -1.34
CDH1-208ENST00000565810 PARP16Q8N5Y8 322 aa6.66□□□□□ -1.34
CDH1-208ENST00000565810 OR13C5Q8NGS8 318 aa6.66□□□□□ -1.34
CDH1-208ENST00000565810 OR8S1Q8NH09 359 aa6.66□□□□□ -1.34
CDH1-208ENST00000565810 RGP1Q92546 391 aaPredicted RBP6.66□□□□□ -1.34
CDH1-208ENST00000565810 TMIGD2Q96BF3 282 aa6.66□□□□□ -1.34
CDH1-208ENST00000565810 YIPF6Q96EC8 236 aa6.66□□□□□ -1.34
CDH1-208ENST00000565810 DERL3Q96Q80 235 aa6.66□□□□□ -1.34
CDH1-208ENST00000565810 OR14A2Q96R54 314 aa6.66□□□□□ -1.34
CDH1-208ENST00000565810 DIRC2Q96SL1 478 aa6.66□□□□□ -1.34
CDH1-208ENST00000565810 MICU1Q9BPX6 476 aa6.66□□□□□ -1.34
CDH1-208ENST00000565810 SLC30A2Q9BRI3 323 aa6.66□□□□□ -1.34
CDH1-208ENST00000565810 CHCHD6Q9BRQ6 235 aa6.66□□□□□ -1.34
CDH1-208ENST00000565810 ZCCHC4Q9H5U6 513 aa6.66□□□□□ -1.34
CDH1-208ENST00000565810 TCF7L1Q9HCS4 588 aa6.66□□□□□ -1.34
CDH1-208ENST00000565810 NOX4Q9NPH5 578 aa6.66□□□□□ -1.34
CDH1-208ENST00000565810 GPR173Q9NS66 373 aa6.66□□□□□ -1.34
CDH1-208ENST00000565810 FOXJ3Q9UPW0 622 aa6.66□□□□□ -1.34
CDH1-208ENST00000565810 LAMP3Q9UQV4 416 aa6.66□□□□□ -1.34
CDH1-208ENST00000565810 RHBDD3Q9Y3P4 386 aa6.66□□□□□ -1.34
CDH1-208ENST00000565810 ANKHD1Q8IWZ3 2542 aaKnown RBP6.65□□□□□ -1.34
CDH1-208ENST00000565810 TRBV5-7A0A0A0MS05 114 aa6.65□□□□□ -1.34
CDH1-208ENST00000565810 MEGF11A6BM72 1044 aa6.65□□□□□ -1.34
CDH1-208ENST00000565810 CCDC160A6NGH7 325 aa6.65□□□□□ -1.34
CDH1-208ENST00000565810 TPD52L2O43399 206 aaKnown RBP6.65□□□□□ -1.34
CDH1-208ENST00000565810 SPRY3O43610 288 aa6.65□□□□□ -1.34
CDH1-208ENST00000565810 GMDSO60547 372 aa6.65□□□□□ -1.34
CDH1-208ENST00000565810 LMX1BO60663 402 aa6.65□□□□□ -1.34
CDH1-208ENST00000565810 NAT2P11245 290 aa6.65□□□□□ -1.34
CDH1-208ENST00000565810 ATF1P18846 271 aa6.65□□□□□ -1.34
CDH1-208ENST00000565810 RAB3AP20336 220 aa6.65□□□□□ -1.34
CDH1-208ENST00000565810 PRKACBP22694 351 aa6.65□□□□□ -1.34
CDH1-208ENST00000565810 CA6P23280 308 aa6.65□□□□□ -1.34
CDH1-208ENST00000565810 GADD45AP24522 165 aa6.65□□□□□ -1.34
CDH1-208ENST00000565810 MYL9P24844 172 aa6.65□□□□□ -1.34
CDH1-208ENST00000565810 CALRP27797 417 aaKnown RBP6.65□□□□□ -1.34
CDH1-208ENST00000565810 FGF9P31371 208 aaPredicted RBP6.65□□□□□ -1.34
CDH1-208ENST00000565810 CRYBB2P43320 205 aa6.65□□□□□ -1.34
CDH1-208ENST00000565810 ALDH3B1P43353 468 aa6.65□□□□□ -1.34
CDH1-208ENST00000565810 RANBP1P43487 201 aa6.65□□□□□ -1.34
CDH1-208ENST00000565810 MMP15P51511 669 aa6.65□□□□□ -1.34
CDH1-208ENST00000565810 PSMD7P51665 324 aa6.65□□□□□ -1.34
CDH1-208ENST00000565810 PRDX4Q13162 271 aa6.65□□□□□ -1.34
CDH1-208ENST00000565810 TNK1Q13470 666 aa6.65□□□□□ -1.34
CDH1-208ENST00000565810 BLMHQ13867 455 aa6.65□□□□□ -1.34
CDH1-208ENST00000565810 SWI5Q1ZZU3 235 aa6.65□□□□□ -1.34
CDH1-208ENST00000565810 PCGF3Q3KNV8 242 aa6.65□□□□□ -1.34
CDH1-208ENST00000565810 CEACAM21Q3KPI0 293 aa6.65□□□□□ -1.34
CDH1-208ENST00000565810 GPR107Q5VW38 600 aa6.65□□□□□ -1.34
CDH1-208ENST00000565810 PLCXD3Q63HM9 321 aa6.65□□□□□ -1.34
CDH1-208ENST00000565810 CD200R1LQ6Q8B3 271 aa6.65□□□□□ -1.34
CDH1-208ENST00000565810 TMEM91Q6ZNR0 172 aa6.65□□□□□ -1.34
CDH1-208ENST00000565810 UTS2BQ765I0 119 aa6.65□□□□□ -1.34
CDH1-208ENST00000565810 KRT74Q7RTS7 529 aa6.65□□□□□ -1.34
CDH1-208ENST00000565810 SATL1Q86VE3 508 aa6.65□□□□□ -1.34
CDH1-208ENST00000565810 ANKRD13BQ86YJ7 626 aa6.65□□□□□ -1.34
CDH1-208ENST00000565810 CLVS1Q8IUQ0 354 aaPredicted RBP6.65□□□□□ -1.34
CDH1-208ENST00000565810 ZNF295-AS1Q8N0V1 137 aa6.65□□□□□ -1.34
CDH1-208ENST00000565810 OR2Z1Q8NG97 314 aa6.65□□□□□ -1.34
CDH1-208ENST00000565810 OR5A2Q8NGI9 324 aa6.65□□□□□ -1.34
CDH1-208ENST00000565810 OR13C9Q8NGT0 318 aa6.65□□□□□ -1.34
CDH1-208ENST00000565810 SPSB1Q96BD6 273 aa6.65□□□□□ -1.34
CDH1-208ENST00000565810 ADAT3Q96EY9 351 aaPredicted RBP6.65□□□□□ -1.34
CDH1-208ENST00000565810 CPNE2Q96FN4 548 aaPredicted RBP6.65□□□□□ -1.34
CDH1-208ENST00000565810 RNF170Q96K19 258 aa6.65□□□□□ -1.34
CDH1-208ENST00000565810 KCTD7Q96MP8 289 aa6.65□□□□□ -1.34
CDH1-208ENST00000565810 ADAT1Q9BUB4 502 aaKnown RBP6.65□□□□□ -1.34
CDH1-208ENST00000565810 FUNDC2Q9BWH2 189 aa6.65□□□□□ -1.34
CDH1-208ENST00000565810 CHST5Q9GZS9 411 aa6.65□□□□□ -1.34
CDH1-208ENST00000565810 EGLN1Q9GZT9 426 aa6.65□□□□□ -1.34
CDH1-208ENST00000565810 RAB1BQ9H0U4 201 aa6.65□□□□□ -1.34
CDH1-208ENST00000565810 OR51E2Q9H255 320 aa6.65□□□□□ -1.34
CDH1-208ENST00000565810 PLEKHF2Q9H8W4 249 aa6.65□□□□□ -1.34
CDH1-208ENST00000565810 MSL2Q9HCI7 577 aa6.65□□□□□ -1.34
CDH1-208ENST00000565810 SNTG1Q9NSN8 517 aa6.65□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms