RNA–Protein interactions for RNA: ENST00000563109.1

RAB40C-207, Transcript of RAB40C, member RAS oncogene family, humanhuman

TSL 3

Gene RAB40C, Length 710 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-207ENST00000563109 SORCS2Q96PQ0 1159 aa16.03■□□□□ 0.16
RAB40C-207ENST00000563109 NR1H4Q96RI1 486 aaPredicted RBP16.03■□□□□ 0.16
RAB40C-207ENST00000563109 GSX2Q9BZM3 304 aa16.03■□□□□ 0.16
RAB40C-207ENST00000563109 DECR2Q9NUI1 292 aa16.03■□□□□ 0.16
RAB40C-207ENST00000563109 NKIRAS2Q9NYR9 191 aa16.03■□□□□ 0.16
RAB40C-207ENST00000563109 ANXA2P2A6NMY6 339 aa16.02■□□□□ 0.16
RAB40C-207ENST00000563109 GMDSO60547 372 aa16.02■□□□□ 0.16
RAB40C-207ENST00000563109 CST4P01036 141 aa16.02■□□□□ 0.16
RAB40C-207ENST00000563109 ADH4P08319 380 aa16.02■□□□□ 0.16
RAB40C-207ENST00000563109 PAX1P15863 534 aa16.02■□□□□ 0.16
RAB40C-207ENST00000563109 FAHP16930 419 aa16.02■□□□□ 0.16
RAB40C-207ENST00000563109 ZNF20P17024 532 aa16.02■□□□□ 0.16
RAB40C-207ENST00000563109 CELP19835 753 aa16.02■□□□□ 0.16
RAB40C-207ENST00000563109 TNFAIP6P98066 277 aaPredicted RBP16.02■□□□□ 0.16
RAB40C-207ENST00000563109 EMX1Q04741 257 aaPredicted RBP16.02■□□□□ 0.16
RAB40C-207ENST00000563109 MZT1Q08AG7 82 aa16.02■□□□□ 0.16
RAB40C-207ENST00000563109 TNK1Q13470 666 aa16.02■□□□□ 0.16
RAB40C-207ENST00000563109 Q6ZSR3 168 aa16.02■□□□□ 0.16
RAB40C-207ENST00000563109 TSPAN14Q8NG11 270 aa16.02■□□□□ 0.16
RAB40C-207ENST00000563109 OR10AD1Q8NGE0 317 aa16.02■□□□□ 0.16
RAB40C-207ENST00000563109 OR8S1Q8NH09 359 aa16.02■□□□□ 0.16
RAB40C-207ENST00000563109 GPR148Q8TDV2 347 aa16.02■□□□□ 0.16
RAB40C-207ENST00000563109 C10orf35Q96D05 121 aa16.02■□□□□ 0.16
RAB40C-207ENST00000563109 ZNF696Q9H7X3 374 aa16.02■□□□□ 0.16
RAB40C-207ENST00000563109 VCX3AQ9NNX9 186 aa16.02■□□□□ 0.16
RAB40C-207ENST00000563109 ISYNA1Q9NPH2 558 aa16.02■□□□□ 0.16
RAB40C-207ENST00000563109 ZNF281Q9Y2X9 895 aa16.02■□□□□ 0.16
RAB40C-207ENST00000563109 RHBDD3Q9Y3P4 386 aa16.02■□□□□ 0.16
RAB40C-207ENST00000563109 MPC1Q9Y5U8 109 aa16.02■□□□□ 0.16
RAB40C-207ENST00000563109 SIRT4Q9Y6E7 314 aaPredicted RBP16.02■□□□□ 0.16
RAB40C-207ENST00000563109 A0A087WXM4 84 aa16.01■□□□□ 0.15
RAB40C-207ENST00000563109 TRIM64A6NGJ6 449 aa16.01■□□□□ 0.15
RAB40C-207ENST00000563109 MLNRO43193 412 aa16.01■□□□□ 0.15
RAB40C-207ENST00000563109 MAGEB1P43366 347 aa16.01■□□□□ 0.15
RAB40C-207ENST00000563109 EFNA4P52798 201 aa16.01■□□□□ 0.15
RAB40C-207ENST00000563109 MLLT11Q13015 90 aaPredicted RBP16.01■□□□□ 0.15
RAB40C-207ENST00000563109 PRDX4Q13162 271 aa16.01■□□□□ 0.15
RAB40C-207ENST00000563109 TESK1Q15569 626 aa16.01■□□□□ 0.15
RAB40C-207ENST00000563109 ZDHHC23Q8IYP9 409 aa16.01■□□□□ 0.15
RAB40C-207ENST00000563109 LRRC75A-AS1Q8N1F1 130 aa16.01■□□□□ 0.15
RAB40C-207ENST00000563109 SPERTQ8NA61 448 aa16.01■□□□□ 0.15
RAB40C-207ENST00000563109 PIGCQ92535 297 aa16.01■□□□□ 0.15
RAB40C-207ENST00000563109 GHSRQ92847 366 aa16.01■□□□□ 0.15
RAB40C-207ENST00000563109 HIST1H2AAQ96QV6 131 aa16.01■□□□□ 0.15
RAB40C-207ENST00000563109 MGLLQ99685 303 aa16.01■□□□□ 0.15
RAB40C-207ENST00000563109 SAP30LQ9HAJ7 183 aa16.01■□□□□ 0.15
RAB40C-207ENST00000563109 DHDHQ9UQ10 334 aa16.01■□□□□ 0.15
RAB40C-207ENST00000563109 LRBAP50851 2863 aa16.01■□□□□ 0.15
RAB40C-207ENST00000563109 ABCA12Q86UK0 2595 aa16■□□□□ 0.15
RAB40C-207ENST00000563109 A0A1B0GWJ7 208 aa16■□□□□ 0.15
RAB40C-207ENST00000563109 ZNF850A8MQ14 1090 aa16■□□□□ 0.15
RAB40C-207ENST00000563109 PLPP2O43688 288 aa16■□□□□ 0.15
RAB40C-207ENST00000563109 HLA-DPB1P04440 258 aa16■□□□□ 0.15
RAB40C-207ENST00000563109 CD1AP06126 327 aa16■□□□□ 0.15
RAB40C-207ENST00000563109 CD55P08174 381 aa16■□□□□ 0.15
RAB40C-207ENST00000563109 SRP9P49458 86 aaKnown RBP16■□□□□ 0.15
RAB40C-207ENST00000563109 CCL8P80075 99 aa16■□□□□ 0.15
RAB40C-207ENST00000563109 YIF1BQ5BJH7 314 aa16■□□□□ 0.15
RAB40C-207ENST00000563109 CLVS2Q5SYC1 327 aa16■□□□□ 0.15
RAB40C-207ENST00000563109 OR10AC1Q8NH08 325 aa16■□□□□ 0.15
RAB40C-207ENST00000563109 DVL3Q92997 716 aaPredicted RBP16■□□□□ 0.15
RAB40C-207ENST00000563109 PGLYRP3Q96LB9 341 aa16■□□□□ 0.15
RAB40C-207ENST00000563109 MICU1Q9BPX6 476 aa16■□□□□ 0.15
RAB40C-207ENST00000563109 IL19Q9UHD0 177 aa16■□□□□ 0.15
RAB40C-207ENST00000563109 ANKRD17O75179 2603 aaKnown RBP16■□□□□ 0.15
RAB40C-207ENST00000563109 APCP25054 2843 aa16■□□□□ 0.15
RAB40C-207ENST00000563109 AKAP6Q13023 2319 aa15.99■□□□□ 0.15
RAB40C-207ENST00000563109 F5H5P2 479 aa15.99■□□□□ 0.15
RAB40C-207ENST00000563109 H0YL77 283 aa15.99■□□□□ 0.15
RAB40C-207ENST00000563109 GATBO75879 557 aaKnown RBP15.99■□□□□ 0.15
RAB40C-207ENST00000563109 F12P00748 615 aaPredicted RBP15.99■□□□□ 0.15
RAB40C-207ENST00000563109 SERPINA3P01011 423 aa15.99■□□□□ 0.15
RAB40C-207ENST00000563109 IGHV4-39P01824 125 aa15.99■□□□□ 0.15
RAB40C-207ENST00000563109 CD2P06729 351 aa15.99■□□□□ 0.15
RAB40C-207ENST00000563109 TNFRSF1AP19438 455 aa15.99■□□□□ 0.15
RAB40C-207ENST00000563109 GPR50Q13585 617 aa15.99■□□□□ 0.15
RAB40C-207ENST00000563109 DOC2BQ14184 412 aa15.99■□□□□ 0.15
RAB40C-207ENST00000563109 UBE2UQ5VVX9 321 aa15.99■□□□□ 0.15
RAB40C-207ENST00000563109 PLCXD3Q63HM9 321 aa15.99■□□□□ 0.15
RAB40C-207ENST00000563109 OR51A4Q8NGJ6 313 aa15.99■□□□□ 0.15
RAB40C-207ENST00000563109 PP6455Q8WZ26 134 aa15.99■□□□□ 0.15
RAB40C-207ENST00000563109 THRSPQ92748 146 aa15.99■□□□□ 0.15
RAB40C-207ENST00000563109 OR2V2Q96R30 315 aa15.99■□□□□ 0.15
RAB40C-207ENST00000563109 RTL8AQ9BWD3 113 aa15.99■□□□□ 0.15
RAB40C-207ENST00000563109 CXXC4Q9H2H0 198 aa15.99■□□□□ 0.15
RAB40C-207ENST00000563109 ZNF275Q9NSD4 429 aaPredicted RBP15.99■□□□□ 0.15
RAB40C-207ENST00000563109 C14orf119Q9NWQ9 140 aa15.99■□□□□ 0.15
RAB40C-207ENST00000563109 ANKRD61A6NGH8 418 aa15.98■□□□□ 0.15
RAB40C-207ENST00000563109 LMX1BO60663 402 aa15.98■□□□□ 0.15
RAB40C-207ENST00000563109 NCR1O76036 304 aa15.98■□□□□ 0.15
RAB40C-207ENST00000563109 NRASP01111 189 aa15.98■□□□□ 0.15
RAB40C-207ENST00000563109 OCM2P0CE71 109 aa15.98■□□□□ 0.15
RAB40C-207ENST00000563109 PCMT1P22061 227 aa15.98■□□□□ 0.15
RAB40C-207ENST00000563109 PSMB9P28065 219 aa15.98■□□□□ 0.15
RAB40C-207ENST00000563109 CD200P41217 278 aa15.98■□□□□ 0.15
RAB40C-207ENST00000563109 LIPKQ5VXJ0 399 aa15.98■□□□□ 0.15
RAB40C-207ENST00000563109 MOB3CQ70IA8 216 aa15.98■□□□□ 0.15
RAB40C-207ENST00000563109 CELF2-AS1Q8N7Q2 184 aa15.98■□□□□ 0.15
RAB40C-207ENST00000563109 ITLN1Q8WWA0 313 aa15.98■□□□□ 0.15
RAB40C-207ENST00000563109 RGP1Q92546 391 aaPredicted RBP15.98■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms