RNA–Protein interactions for RNA: ENST00000561431.1

LRRC28-222, Transcript of leucine rich repeat containing 28, humanhuman

TSL 3

Gene LRRC28, Length 754 nt, Biotype processed transcript, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-222ENST00000561431 C9orf135Q5VTT2 229 aa3.41□□□□□ -1.86
LRRC28-222ENST00000561431 MEDAGQ5VYS4 303 aa3.41□□□□□ -1.86
LRRC28-222ENST00000561431 BHLHB9Q6PI77 547 aa3.41□□□□□ -1.86
LRRC28-222ENST00000561431 CERS6Q6ZMG9 384 aa3.41□□□□□ -1.86
LRRC28-222ENST00000561431 C3P1Q6ZMU1 363 aa3.41□□□□□ -1.86
LRRC28-222ENST00000561431 SSX7Q7RTT5 188 aa3.41□□□□□ -1.86
LRRC28-222ENST00000561431 SLC16A14Q7RTX9 510 aa3.41□□□□□ -1.86
LRRC28-222ENST00000561431 OR2W3Q7Z3T1 314 aa3.41□□□□□ -1.86
LRRC28-222ENST00000561431 PRUNE1Q86TP1 453 aa3.41□□□□□ -1.86
LRRC28-222ENST00000561431 C17orf82Q86X59 251 aaPredicted RBP3.41□□□□□ -1.86
LRRC28-222ENST00000561431 ERI1Q8IV48 349 aaKnown RBP3.41□□□□□ -1.86
LRRC28-222ENST00000561431 SPAG16Q8N0X2 631 aa3.41□□□□□ -1.86
LRRC28-222ENST00000561431 METTL4Q8N3J2 472 aa3.41□□□□□ -1.86
LRRC28-222ENST00000561431 C2orf73Q8N5S3 287 aaPredicted RBP3.41□□□□□ -1.86
LRRC28-222ENST00000561431 GPR26Q8NDV2 337 aa3.41□□□□□ -1.86
LRRC28-222ENST00000561431 CCDC54Q8NEL0 328 aa3.41□□□□□ -1.86
LRRC28-222ENST00000561431 OR10A7Q8NGE5 316 aa3.41□□□□□ -1.86
LRRC28-222ENST00000561431 OR5AK3PQ8NH89 298 aa3.41□□□□□ -1.86
LRRC28-222ENST00000561431 OR10J5Q8NHC4 309 aa3.41□□□□□ -1.86
LRRC28-222ENST00000561431 OR2T6Q8NHC8 308 aa3.41□□□□□ -1.86
LRRC28-222ENST00000561431 ACTRT1Q8TDG2 376 aa3.41□□□□□ -1.86
LRRC28-222ENST00000561431 TFB1MQ8WVM0 346 aaKnown RBP3.41□□□□□ -1.86
LRRC28-222ENST00000561431 APOBEC4Q8WW27 367 aaKnown RBP3.41□□□□□ -1.86
LRRC28-222ENST00000561431 RORBQ92753 470 aa3.41□□□□□ -1.86
LRRC28-222ENST00000561431 PTH2Q96A98 100 aa3.41□□□□□ -1.86
LRRC28-222ENST00000561431 PPWD1Q96BP3 646 aaKnown RBP3.41□□□□□ -1.86
LRRC28-222ENST00000561431 NXPE2Q96DL1 559 aa3.41□□□□□ -1.86
LRRC28-222ENST00000561431 CMTM5Q96DZ9 223 aa3.41□□□□□ -1.86
LRRC28-222ENST00000561431 ZNF486Q96H40 463 aaPredicted RBP3.41□□□□□ -1.86
LRRC28-222ENST00000561431 COPS4Q9BT78 406 aa3.41□□□□□ -1.86
LRRC28-222ENST00000561431 RIOK2Q9BVS4 552 aaKnown RBP3.41□□□□□ -1.86
LRRC28-222ENST00000561431 UCK2Q9BZX2 261 aa3.41□□□□□ -1.86
LRRC28-222ENST00000561431 RHOJQ9H4E5 214 aa3.41□□□□□ -1.86
LRRC28-222ENST00000561431 ZNF696Q9H7X3 374 aa3.41□□□□□ -1.86
LRRC28-222ENST00000561431 PLEKHA1Q9HB21 404 aa3.41□□□□□ -1.86
LRRC28-222ENST00000561431 C3orf14Q9HBI5 128 aa3.41□□□□□ -1.86
LRRC28-222ENST00000561431 FBXO8Q9NRD0 319 aa3.41□□□□□ -1.86
LRRC28-222ENST00000561431 CTPS2Q9NRF8 586 aa3.41□□□□□ -1.86
LRRC28-222ENST00000561431 INPP5EQ9NRR6 644 aa3.41□□□□□ -1.86
LRRC28-222ENST00000561431 TMEM9Q9P0T7 183 aa3.41□□□□□ -1.86
LRRC28-222ENST00000561431 NUP50Q9UKX7 468 aa3.41□□□□□ -1.86
LRRC28-222ENST00000561431 PDE10AQ9Y233 779 aa3.41□□□□□ -1.86
LRRC28-222ENST00000561431 FAM32AQ9Y421 112 aaKnown RBP3.41□□□□□ -1.86
LRRC28-222ENST00000561431 V9GYY9 64 aa3.41□□□□□ -1.86
LRRC28-222ENST00000561431 GON4LQ3T8J9 2241 aa3.41□□□□□ -1.86
LRRC28-222ENST00000561431 SHROOM3Q8TF72 1996 aa3.41□□□□□ -1.86
LRRC28-222ENST00000561431 TRPM6Q9BX84 2022 aa3.41□□□□□ -1.86
LRRC28-222ENST00000561431 CFAP47Q6ZTR5 3102 aa3.4□□□□□ -1.86
LRRC28-222ENST00000561431 A0A087WYN8 130 aa3.4□□□□□ -1.87
LRRC28-222ENST00000561431 MEIOCA2RUB1 952 aa3.4□□□□□ -1.87
LRRC28-222ENST00000561431 NKX6-3A6NJ46 265 aa3.4□□□□□ -1.87
LRRC28-222ENST00000561431 D6RAR5 112 aa3.4□□□□□ -1.87
LRRC28-222ENST00000561431 SIRPB1O00241 398 aa3.4□□□□□ -1.87
LRRC28-222ENST00000561431 SLC1A7O00341 560 aa3.4□□□□□ -1.87
LRRC28-222ENST00000561431 PRMT5O14744 637 aaPredicted RBP3.4□□□□□ -1.87
LRRC28-222ENST00000561431 TNFSF11O14788 317 aa3.4□□□□□ -1.87
LRRC28-222ENST00000561431 INPP4BO15327 924 aa3.4□□□□□ -1.87
LRRC28-222ENST00000561431 MAGEB4O15481 346 aaPredicted RBP3.4□□□□□ -1.87
LRRC28-222ENST00000561431 SLC19A2O60779 497 aa3.4□□□□□ -1.87
LRRC28-222ENST00000561431 SRP72O76094 671 aaKnown RBP3.4□□□□□ -1.87
LRRC28-222ENST00000561431 RCBTB2O95199 551 aa3.4□□□□□ -1.87
LRRC28-222ENST00000561431 SERPINA1P01009 418 aa3.4□□□□□ -1.87
LRRC28-222ENST00000561431 TNFP01375 233 aa3.4□□□□□ -1.87
LRRC28-222ENST00000561431 IGLV1-44P01699 117 aa3.4□□□□□ -1.87
LRRC28-222ENST00000561431 PPBPP02775 128 aa3.4□□□□□ -1.87
LRRC28-222ENST00000561431 IFNW1P05000 195 aa3.4□□□□□ -1.87
LRRC28-222ENST00000561431 IGF1P05019 195 aa3.4□□□□□ -1.87
LRRC28-222ENST00000561431 FGF1P05230 155 aa3.4□□□□□ -1.87
LRRC28-222ENST00000561431 CDK1P06493 297 aa3.4□□□□□ -1.87
LRRC28-222ENST00000561431 GSTT2P0CG29 244 aa3.4□□□□□ -1.87
LRRC28-222ENST00000561431 GSTT2BP0CG30 244 aa3.4□□□□□ -1.87
LRRC28-222ENST00000561431 SLC2A1P11166 492 aa3.4□□□□□ -1.87
LRRC28-222ENST00000561431 RNH1P13489 461 aaKnown RBP3.4□□□□□ -1.87
LRRC28-222ENST00000561431 CTSEP14091 401 aa3.4□□□□□ -1.87
LRRC28-222ENST00000561431 AK4P27144 223 aaPredicted RBP3.4□□□□□ -1.87
LRRC28-222ENST00000561431 SRD5A2P31213 254 aa3.4□□□□□ -1.87
LRRC28-222ENST00000561431 GPR1P46091 355 aa3.4□□□□□ -1.87
LRRC28-222ENST00000561431 GNPDA1P46926 289 aa3.4□□□□□ -1.87
LRRC28-222ENST00000561431 XGP55808 180 aa3.4□□□□□ -1.87
LRRC28-222ENST00000561431 TAS2R60P59551 318 aa3.4□□□□□ -1.87
LRRC28-222ENST00000561431 GNB1P62873 340 aa3.4□□□□□ -1.87
LRRC28-222ENST00000561431 DHODHQ02127 395 aa3.4□□□□□ -1.87
LRRC28-222ENST00000561431 PAX2Q02962 417 aa3.4□□□□□ -1.87
LRRC28-222ENST00000561431 ZP4Q12836 540 aa3.4□□□□□ -1.87
LRRC28-222ENST00000561431 SELENBP1Q13228 472 aa3.4□□□□□ -1.87
LRRC28-222ENST00000561431 TMEM187Q14656 261 aa3.4□□□□□ -1.87
LRRC28-222ENST00000561431 PTGES3Q15185 160 aaKnown RBP3.4□□□□□ -1.87
LRRC28-222ENST00000561431 TAF1AQ15573 450 aaPredicted RBP3.4□□□□□ -1.87
LRRC28-222ENST00000561431 SLC1A5Q15758 541 aa3.4□□□□□ -1.87
LRRC28-222ENST00000561431 TOMM34Q15785 309 aaPredicted RBP3.4□□□□□ -1.87
LRRC28-222ENST00000561431 POU2AF1Q16633 256 aa3.4□□□□□ -1.87
LRRC28-222ENST00000561431 ISXQ2M1V0 245 aa3.4□□□□□ -1.87
LRRC28-222ENST00000561431 TRIM16LQ309B1 348 aa3.4□□□□□ -1.87
LRRC28-222ENST00000561431 TMEM30BQ3MIR4 351 aa3.4□□□□□ -1.87
LRRC28-222ENST00000561431 C14orf28Q4W4Y0 310 aa3.4□□□□□ -1.87
LRRC28-222ENST00000561431 PYCR3Q53H96 274 aa3.4□□□□□ -1.87
LRRC28-222ENST00000561431 SPIN3Q5JUX0 258 aa3.4□□□□□ -1.87
LRRC28-222ENST00000561431 LY6G6FQ5SQ64 297 aa3.4□□□□□ -1.87
LRRC28-222ENST00000561431 TIMM23BQ5SRD1 257 aa3.4□□□□□ -1.87
LRRC28-222ENST00000561431 GFI1BQ5VTD9 330 aa3.4□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 55.5 ms