RNA–Protein interactions for RNA: ENST00000560463.5

TRAF3-209, Transcript of TNF receptor associated factor 3, humanhuman

TSL 3

Gene TRAF3, Length 701 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3-209ENST00000560463 RNASE6Q93091 150 aaKnown RBP7.43□□□□□ -1.22
TRAF3-209ENST00000560463 PIGTQ969N2 578 aa7.43□□□□□ -1.22
TRAF3-209ENST00000560463 SPSB1Q96BD6 273 aa7.43□□□□□ -1.22
TRAF3-209ENST00000560463 CCDC120Q96HB5 630 aa7.43□□□□□ -1.22
TRAF3-209ENST00000560463 CEP19Q96LK0 163 aa7.43□□□□□ -1.22
TRAF3-209ENST00000560463 METTL17Q9H7H0 456 aaPredicted RBP7.43□□□□□ -1.22
TRAF3-209ENST00000560463 PLGRKTQ9HBL7 147 aa7.43□□□□□ -1.22
TRAF3-209ENST00000560463 COMMD3Q9UBI1 195 aa7.43□□□□□ -1.22
TRAF3-209ENST00000560463 RABL2AQ9UBK7 228 aaPredicted RBP7.43□□□□□ -1.22
TRAF3-209ENST00000560463 KCNN3Q9UGI6 736 aa7.43□□□□□ -1.22
TRAF3-209ENST00000560463 SPATA2Q9UM82 520 aa7.43□□□□□ -1.22
TRAF3-209ENST00000560463 RABL2BQ9UNT1 228 aa7.43□□□□□ -1.22
TRAF3-209ENST00000560463 ETV7Q9Y603 341 aa7.43□□□□□ -1.22
TRAF3-209ENST00000560463 DYSFO75923 2080 aa7.43□□□□□ -1.22
TRAF3-209ENST00000560463 SMG1Q96Q15 3661 aaKnown RBP7.43□□□□□ -1.22
TRAF3-209ENST00000560463 IGHV2OR16-5A0A0B4J2B6 119 aa7.42□□□□□ -1.22
TRAF3-209ENST00000560463 GGT3PA6NGU5 568 aa7.42□□□□□ -1.22
TRAF3-209ENST00000560463 A6NIN4 97 aa7.42□□□□□ -1.22
TRAF3-209ENST00000560463 CST4P01036 141 aa7.42□□□□□ -1.22
TRAF3-209ENST00000560463 NRASP01111 189 aa7.42□□□□□ -1.22
TRAF3-209ENST00000560463 APOA1P02647 267 aa7.42□□□□□ -1.22
TRAF3-209ENST00000560463 SLC2A2P11168 524 aaPredicted RBP7.42□□□□□ -1.22
TRAF3-209ENST00000560463 RAC2P15153 192 aa7.42□□□□□ -1.22
TRAF3-209ENST00000560463 SELEP16581 610 aa7.42□□□□□ -1.22
TRAF3-209ENST00000560463 PRKACBP22694 351 aa7.42□□□□□ -1.22
TRAF3-209ENST00000560463 PTAFRP25105 342 aa7.42□□□□□ -1.22
TRAF3-209ENST00000560463 ACKR3P25106 362 aa7.42□□□□□ -1.22
TRAF3-209ENST00000560463 HTR2CP28335 458 aa7.42□□□□□ -1.22
TRAF3-209ENST00000560463 CD40LGP29965 261 aa7.42□□□□□ -1.22
TRAF3-209ENST00000560463 CCKARP32238 428 aa7.42□□□□□ -1.22
TRAF3-209ENST00000560463 TNFSF8P32971 234 aa7.42□□□□□ -1.22
TRAF3-209ENST00000560463 ZNF93P35789 620 aaPredicted RBP7.42□□□□□ -1.22
TRAF3-209ENST00000560463 PPP1CBP62140 327 aa7.42□□□□□ -1.22
TRAF3-209ENST00000560463 SORDQ00796 357 aa7.42□□□□□ -1.22
TRAF3-209ENST00000560463 NAAAQ02083 359 aa7.42□□□□□ -1.22
TRAF3-209ENST00000560463 TLE1Q04724 770 aa7.42□□□□□ -1.22
TRAF3-209ENST00000560463 RAB11BQ15907 218 aa7.42□□□□□ -1.22
TRAF3-209ENST00000560463 HES5Q5TA89 166 aa7.42□□□□□ -1.22
TRAF3-209ENST00000560463 FAM166AQ6J272 317 aa7.42□□□□□ -1.22
TRAF3-209ENST00000560463 SEZ6L2Q6UXD5 910 aa7.42□□□□□ -1.22
TRAF3-209ENST00000560463 TMEM108Q6UXF1 575 aa7.42□□□□□ -1.22
TRAF3-209ENST00000560463 RFPL4BQ6ZWI9 263 aa7.42□□□□□ -1.22
TRAF3-209ENST00000560463 CCDC190Q86UF4 302 aa7.42□□□□□ -1.22
TRAF3-209ENST00000560463 LYPD6Q86Y78 171 aa7.42□□□□□ -1.22
TRAF3-209ENST00000560463 ZNF808Q8N4W9 903 aaPredicted RBP7.42□□□□□ -1.22
TRAF3-209ENST00000560463 PNLDC1Q8NA58 520 aaKnown RBP7.42□□□□□ -1.22
TRAF3-209ENST00000560463 DNAAF1Q8NEP3 725 aa7.42□□□□□ -1.22
TRAF3-209ENST00000560463 OR1J1Q8NGS3 322 aa7.42□□□□□ -1.22
TRAF3-209ENST00000560463 OR13C9Q8NGT0 318 aa7.42□□□□□ -1.22
TRAF3-209ENST00000560463 ZNF671Q8TAW3 534 aa7.42□□□□□ -1.22
TRAF3-209ENST00000560463 TRMT10AQ8TBZ6 339 aaKnown RBP7.42□□□□□ -1.22
TRAF3-209ENST00000560463 SSC4DQ8WTU2 575 aa7.42□□□□□ -1.22
TRAF3-209ENST00000560463 CA5BP1Q8WTZ4 195 aa7.42□□□□□ -1.22
TRAF3-209ENST00000560463 ZFAND2BQ8WV99 257 aa7.42□□□□□ -1.22
TRAF3-209ENST00000560463 C1QTNF6Q9BXI9 259 aa7.42□□□□□ -1.22
TRAF3-209ENST00000560463 LIN7BQ9HAP6 207 aa7.42□□□□□ -1.22
TRAF3-209ENST00000560463 ABCB9Q9NP78 766 aa7.42□□□□□ -1.22
TRAF3-209ENST00000560463 KCNJ16Q9NPI9 418 aa7.42□□□□□ -1.22
TRAF3-209ENST00000560463 AKIP1Q9NQ31 210 aa7.42□□□□□ -1.22
TRAF3-209ENST00000560463 PTTG3PQ9NZH4 202 aa7.42□□□□□ -1.22
TRAF3-209ENST00000560463 SLC7A11Q9UPY5 501 aa7.42□□□□□ -1.22
TRAF3-209ENST00000560463 ZFYVE26Q68DK2 2539 aa7.41□□□□□ -1.22
TRAF3-209ENST00000560463 DOCK11Q5JSL3 2073 aa7.41□□□□□ -1.22
TRAF3-209ENST00000560463 DSCAML1Q8TD84 2053 aa7.41□□□□□ -1.22
TRAF3-209ENST00000560463 ANKRD30BLA7E2S9 258 aa7.41□□□□□ -1.22
TRAF3-209ENST00000560463 B8ZZF3 427 aa7.41□□□□□ -1.22
TRAF3-209ENST00000560463 M0R1B8 84 aa7.41□□□□□ -1.22
TRAF3-209ENST00000560463 GMDSO60547 372 aa7.41□□□□□ -1.22
TRAF3-209ENST00000560463 HCKP08631 526 aa7.41□□□□□ -1.22
TRAF3-209ENST00000560463 UBBP0CG47 229 aa7.41□□□□□ -1.22
TRAF3-209ENST00000560463 AZGP1P25311 298 aaKnown RBP7.41□□□□□ -1.22
TRAF3-209ENST00000560463 TALDO1P37837 337 aa7.41□□□□□ -1.22
TRAF3-209ENST00000560463 ALDH3B1P43353 468 aa7.41□□□□□ -1.22
TRAF3-209ENST00000560463 EVX1P49640 407 aa7.41□□□□□ -1.22
TRAF3-209ENST00000560463 RBP2P50120 134 aa7.41□□□□□ -1.22
TRAF3-209ENST00000560463 ZNF83P51522 516 aa7.41□□□□□ -1.22
TRAF3-209ENST00000560463 FUT6P51993 359 aa7.41□□□□□ -1.22
TRAF3-209ENST00000560463 PPP5CP53041 499 aa7.41□□□□□ -1.22
TRAF3-209ENST00000560463 RPS23P62266 143 aaKnown RBP7.41□□□□□ -1.22
TRAF3-209ENST00000560463 HLXQ14774 488 aaPredicted RBP7.41□□□□□ -1.22
TRAF3-209ENST00000560463 KISS1Q15726 138 aa7.41□□□□□ -1.22
TRAF3-209ENST00000560463 UBE2V2Q15819 145 aa7.41□□□□□ -1.22
TRAF3-209ENST00000560463 ZNF718Q3SXZ3 478 aa7.41□□□□□ -1.22
TRAF3-209ENST00000560463 UBE2NLQ5JXB2 153 aa7.41□□□□□ -1.22
TRAF3-209ENST00000560463 XKRXQ6PP77 449 aa7.41□□□□□ -1.22
TRAF3-209ENST00000560463 LHFPL2Q6ZUX7 228 aa7.41□□□□□ -1.22
TRAF3-209ENST00000560463 LAX1Q8IWV1 398 aa7.41□□□□□ -1.22
TRAF3-209ENST00000560463 OR5AS1Q8N127 324 aa7.41□□□□□ -1.22
TRAF3-209ENST00000560463 JAGN1Q8N5M9 183 aa7.41□□□□□ -1.22
TRAF3-209ENST00000560463 SAMD12Q8N8I0 201 aa7.41□□□□□ -1.22
TRAF3-209ENST00000560463 OR56B2PQ8NGI1 322 aa7.41□□□□□ -1.22
TRAF3-209ENST00000560463 OR52N4Q8NGI2 321 aa7.41□□□□□ -1.22
TRAF3-209ENST00000560463 OR51A2Q8NGJ7 313 aa7.41□□□□□ -1.22
TRAF3-209ENST00000560463 PRR7Q8TB68 274 aa7.41□□□□□ -1.22
TRAF3-209ENST00000560463 SLC25A40Q8TBP6 338 aa7.41□□□□□ -1.22
TRAF3-209ENST00000560463 RAB40AQ8WXH6 277 aa7.41□□□□□ -1.22
TRAF3-209ENST00000560463 SLC25A28Q96A46 364 aa7.41□□□□□ -1.22
TRAF3-209ENST00000560463 PTX4Q96A99 478 aa7.41□□□□□ -1.22
TRAF3-209ENST00000560463 HAVCR1Q96D42 359 aa7.41□□□□□ -1.22
TRAF3-209ENST00000560463 MARS2Q96GW9 593 aaKnown RBP7.41□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms