RNA–Protein interactions for RNA: ENST00000560089.5

SEMA4B-215, Transcript of semaphorin 4B, humanhuman

TSL 1 (best)

Gene SEMA4B, Length 2,804 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4B-215ENST00000560089 PMS2P11Q13670 270 aa17.06■□□□□ 0.32
SEMA4B-215ENST00000560089 SLC25A24Q6NUK1 477 aa17.06■□□□□ 0.32
SEMA4B-215ENST00000560089 GVQW1Q8N7I0 195 aa17.06■□□□□ 0.32
SEMA4B-215ENST00000560089 POC1AQ8NBT0 407 aa17.06■□□□□ 0.32
SEMA4B-215ENST00000560089 TPSD1Q9BZJ3 242 aa17.06■□□□□ 0.32
SEMA4B-215ENST00000560089 PCED1AQ9H1Q7 454 aa17.06■□□□□ 0.32
SEMA4B-215ENST00000560089 STRAPQ9Y3F4 350 aaKnown RBP17.06■□□□□ 0.32
SEMA4B-215ENST00000560089 ATG2BQ96BY7 2078 aa17.06■□□□□ 0.32
SEMA4B-215ENST00000560089 NUP210LQ5VU65 1888 aa17.06■□□□□ 0.32
SEMA4B-215ENST00000560089 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP17.06■□□□□ 0.32
SEMA4B-215ENST00000560089 GLOD5A6NK44 160 aa17.06■□□□□ 0.32
SEMA4B-215ENST00000560089 DOK2O60496 412 aa17.06■□□□□ 0.32
SEMA4B-215ENST00000560089 ZNF888P0CJ79 500 aaPredicted RBP17.06■□□□□ 0.32
SEMA4B-215ENST00000560089 SLC25A1P53007 311 aa17.06■□□□□ 0.32
SEMA4B-215ENST00000560089 PTTG1IPP53801 180 aa17.06■□□□□ 0.32
SEMA4B-215ENST00000560089 FAM189A2Q15884 450 aa17.06■□□□□ 0.32
SEMA4B-215ENST00000560089 NKAIN1Q4KMZ8 207 aa17.06■□□□□ 0.32
SEMA4B-215ENST00000560089 TMEM128Q5BJH2 165 aa17.06■□□□□ 0.32
SEMA4B-215ENST00000560089 OR51A2Q8NGJ7 313 aa17.06■□□□□ 0.32
SEMA4B-215ENST00000560089 TMEM18Q96B42 140 aa17.06■□□□□ 0.32
SEMA4B-215ENST00000560089 ADAP2Q9NPF8 381 aa17.06■□□□□ 0.32
SEMA4B-215ENST00000560089 NUP210Q8TEM1 1887 aaPredicted RBP17.05■□□□□ 0.32
SEMA4B-215ENST00000560089 TSPAN6O43657 245 aa17.05■□□□□ 0.32
SEMA4B-215ENST00000560089 GALNSP34059 522 aa17.05■□□□□ 0.32
SEMA4B-215ENST00000560089 RAB7AP51149 207 aa17.05■□□□□ 0.32
SEMA4B-215ENST00000560089 ZNF136P52737 540 aa17.05■□□□□ 0.32
SEMA4B-215ENST00000560089 C1orf189Q5VU69 101 aa17.05■□□□□ 0.32
SEMA4B-215ENST00000560089 TPRG1Q6ZUI0 275 aa17.05■□□□□ 0.32
SEMA4B-215ENST00000560089 TRAPPC6BQ86SZ2 158 aa17.05■□□□□ 0.32
SEMA4B-215ENST00000560089 ZNF100Q8IYN0 542 aa17.05■□□□□ 0.32
SEMA4B-215ENST00000560089 Q8NFD4 153 aa17.05■□□□□ 0.32
SEMA4B-215ENST00000560089 ZNF576Q9H609 170 aa17.05■□□□□ 0.32
SEMA4B-215ENST00000560089 LRFN1Q9P244 771 aa17.05■□□□□ 0.32
SEMA4B-215ENST00000560089 SRPK3Q9UPE1 567 aa17.05■□□□□ 0.32
SEMA4B-215ENST00000560089 DNAH14Q0VDD8 3507 aa17.05■□□□□ 0.32
SEMA4B-215ENST00000560089 RBFOX3A6NFN3 312 aa17.05■□□□□ 0.32
SEMA4B-215ENST00000560089 PRRT4C9JH25 899 aa17.05■□□□□ 0.32
SEMA4B-215ENST00000560089 PRPS1P60891 318 aa17.05■□□□□ 0.32
SEMA4B-215ENST00000560089 SELENOTP62341 195 aa17.05■□□□□ 0.32
SEMA4B-215ENST00000560089 COL10A1Q03692 680 aa17.05■□□□□ 0.32
SEMA4B-215ENST00000560089 SLC22A6Q4U2R8 563 aa17.05■□□□□ 0.32
SEMA4B-215ENST00000560089 COL5A1-AS1Q5SY13 56 aa17.05■□□□□ 0.32
SEMA4B-215ENST00000560089 CLEC18BQ6UXF7 455 aa17.05■□□□□ 0.32
SEMA4B-215ENST00000560089 OR2L2Q8NH16 312 aa17.05■□□□□ 0.32
SEMA4B-215ENST00000560089 FAM213BQ8TBF2 198 aa17.05■□□□□ 0.32
SEMA4B-215ENST00000560089 COMMD4Q9H0A8 199 aa17.05■□□□□ 0.32
SEMA4B-215ENST00000560089 CLEC1BQ9P126 229 aa17.05■□□□□ 0.32
SEMA4B-215ENST00000560089 DOCK8Q8NF50 2099 aa17.04■□□□□ 0.32
SEMA4B-215ENST00000560089 A0A1W2PN81 502 aa17.04■□□□□ 0.32
SEMA4B-215ENST00000560089 A6NCN8 305 aa17.04■□□□□ 0.32
SEMA4B-215ENST00000560089 NKX6-3A6NJ46 265 aa17.04■□□□□ 0.32
SEMA4B-215ENST00000560089 HPRT1P00492 218 aa17.04■□□□□ 0.32
SEMA4B-215ENST00000560089 CHRNA7P36544 502 aa17.04■□□□□ 0.32
SEMA4B-215ENST00000560089 OR1Q1Q15612 314 aa17.04■□□□□ 0.32
SEMA4B-215ENST00000560089 CHRFAM7AQ494W8 412 aa17.04■□□□□ 0.32
SEMA4B-215ENST00000560089 PLPP7Q8NBV4 271 aa17.04■□□□□ 0.32
SEMA4B-215ENST00000560089 NUDT10Q8NFP7 164 aa17.04■□□□□ 0.32
SEMA4B-215ENST00000560089 OR56A1Q8NGH5 318 aa17.04■□□□□ 0.32
SEMA4B-215ENST00000560089 TSEN15Q8WW01 171 aaKnown RBP17.04■□□□□ 0.32
SEMA4B-215ENST00000560089 FGF14Q92915 247 aa17.04■□□□□ 0.32
SEMA4B-215ENST00000560089 CDH20Q9HBT6 801 aa17.04■□□□□ 0.32
SEMA4B-215ENST00000560089 HS3ST2Q9Y278 367 aa17.04■□□□□ 0.32
SEMA4B-215ENST00000560089 MEMO1Q9Y316 297 aa17.04■□□□□ 0.32
SEMA4B-215ENST00000560089 TRBV11-1A0A0K0K1C0 115 aa17.04■□□□□ 0.32
SEMA4B-215ENST00000560089 UPK3AO75631 287 aa17.04■□□□□ 0.32
SEMA4B-215ENST00000560089 SFT2D2O95562 160 aa17.04■□□□□ 0.32
SEMA4B-215ENST00000560089 LCATP04180 440 aa17.04■□□□□ 0.32
SEMA4B-215ENST00000560089 LMO1P25800 156 aa17.04■□□□□ 0.32
SEMA4B-215ENST00000560089 RAP1BP61224 184 aa17.04■□□□□ 0.32
SEMA4B-215ENST00000560089 SPEM2Q0P670 501 aa17.04■□□□□ 0.32
SEMA4B-215ENST00000560089 PARM1Q6UWI2 310 aa17.04■□□□□ 0.32
SEMA4B-215ENST00000560089 TMEM64Q6YI46 380 aa17.04■□□□□ 0.32
SEMA4B-215ENST00000560089 SLC25A26Q70HW3 274 aa17.04■□□□□ 0.32
SEMA4B-215ENST00000560089 NUFIP2Q7Z417 695 aaKnown RBP17.04■□□□□ 0.32
SEMA4B-215ENST00000560089 SNIP1Q8TAD8 396 aaKnown RBP17.04■□□□□ 0.32
SEMA4B-215ENST00000560089 HIST1H2AAQ96QV6 131 aa17.04■□□□□ 0.32
SEMA4B-215ENST00000560089 ARID1AO14497 2285 aa17.04■□□□□ 0.32
SEMA4B-215ENST00000560089 ZNF708P17019 499 aa17.03■□□□□ 0.32
SEMA4B-215ENST00000560089 CHRNB4P30926 498 aa17.03■□□□□ 0.32
SEMA4B-215ENST00000560089 S100A7P31151 101 aa17.03■□□□□ 0.32
SEMA4B-215ENST00000560089 ELLP55199 621 aaPredicted RBP17.03■□□□□ 0.32
SEMA4B-215ENST00000560089 SNRPD1P62314 119 aaKnown RBP17.03■□□□□ 0.32
SEMA4B-215ENST00000560089 ZNF684Q5T5D7 378 aa17.03■□□□□ 0.32
SEMA4B-215ENST00000560089 FKBP11Q9NYL4 201 aa17.03■□□□□ 0.32
SEMA4B-215ENST00000560089 HSF4Q9ULV5 492 aa17.03■□□□□ 0.32
SEMA4B-215ENST00000560089 MDC1Q14676 2089 aaKnown RBP17.03■□□□□ 0.32
SEMA4B-215ENST00000560089 IGFBP4P22692 258 aa17.03■□□□□ 0.32
SEMA4B-215ENST00000560089 CFPP27918 469 aa17.03■□□□□ 0.32
SEMA4B-215ENST00000560089 METAP1P53582 386 aa17.03■□□□□ 0.32
SEMA4B-215ENST00000560089 SUCLG1P53597 346 aaKnown RBP17.03■□□□□ 0.32
SEMA4B-215ENST00000560089 CACUL1Q86Y37 369 aa17.03■□□□□ 0.32
SEMA4B-215ENST00000560089 MRGPRDQ8TDS7 321 aa17.03■□□□□ 0.32
SEMA4B-215ENST00000560089 DNAJA3Q96EY1 480 aa17.03■□□□□ 0.32
SEMA4B-215ENST00000560089 MSL2Q9HCI7 577 aa17.03■□□□□ 0.32
SEMA4B-215ENST00000560089 SERTAD3Q9UJW9 196 aa17.03■□□□□ 0.32
SEMA4B-215ENST00000560089 IER3IP1Q9Y5U9 82 aa17.03■□□□□ 0.32
SEMA4B-215ENST00000560089 CHD3Q12873 2000 aaKnown RBP17.03■□□□□ 0.32
SEMA4B-215ENST00000560089 CCL25O15444 150 aa17.02■□□□□ 0.32
SEMA4B-215ENST00000560089 SRP19P09132 144 aaKnown RBP17.02■□□□□ 0.32
SEMA4B-215ENST00000560089 MMP16P51512 607 aa17.02■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms