RNA–Protein interactions for RNA: ENST00000558867.1

CDC42BPB-203, Transcript of CDC42 binding protein kinase beta, humanhuman

TSL 3

Gene CDC42BPB, Length 635 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPB-203ENST00000558867 SF3B6Q9Y3B4 125 aaKnown RBP13.54□□□□□ -0.24
CDC42BPB-203ENST00000558867 CLDN34H7C241 214 aa13.53□□□□□ -0.24
CDC42BPB-203ENST00000558867 IGHG1P01857 330 aa13.53□□□□□ -0.24
CDC42BPB-203ENST00000558867 GYPBP06028 91 aa13.53□□□□□ -0.24
CDC42BPB-203ENST00000558867 CD1AP06126 327 aa13.53□□□□□ -0.24
CDC42BPB-203ENST00000558867 QDPRP09417 244 aa13.53□□□□□ -0.24
CDC42BPB-203ENST00000558867 GABRA5P31644 462 aa13.53□□□□□ -0.24
CDC42BPB-203ENST00000558867 ZNF85Q03923 595 aa13.53□□□□□ -0.24
CDC42BPB-203ENST00000558867 CDONQ4KMG0 1287 aa13.53□□□□□ -0.24
CDC42BPB-203ENST00000558867 LRFN4Q6PJG9 635 aa13.53□□□□□ -0.24
CDC42BPB-203ENST00000558867 SLC16A9Q7RTY1 509 aa13.53□□□□□ -0.24
CDC42BPB-203ENST00000558867 ASB10Q8WXI3 467 aa13.53□□□□□ -0.24
CDC42BPB-203ENST00000558867 RPL3LQ92901 407 aaKnown RBP13.53□□□□□ -0.24
CDC42BPB-203ENST00000558867 DUX5Q96PT3 197 aa13.53□□□□□ -0.24
CDC42BPB-203ENST00000558867 DCUN1D5Q9BTE7 237 aa13.53□□□□□ -0.24
CDC42BPB-203ENST00000558867 RPRD1BQ9NQG5 326 aaKnown RBP13.53□□□□□ -0.24
CDC42BPB-203ENST00000558867 BABAM2Q9NXR7 383 aa13.53□□□□□ -0.24
CDC42BPB-203ENST00000558867 ZNF69Q9UC07 566 aa13.53□□□□□ -0.24
CDC42BPB-203ENST00000558867 CACNG2Q9Y698 323 aa13.53□□□□□ -0.24
CDC42BPB-203ENST00000558867 A0A1B0GUS0 222 aa13.52□□□□□ -0.25
CDC42BPB-203ENST00000558867 CENPBD1B2RD01 187 aa13.52□□□□□ -0.25
CDC42BPB-203ENST00000558867 IGHV1-46P01743 117 aa13.52□□□□□ -0.25
CDC42BPB-203ENST00000558867 FGF9P31371 208 aaPredicted RBP13.52□□□□□ -0.25
CDC42BPB-203ENST00000558867 SERPINB10P48595 397 aa13.52□□□□□ -0.25
CDC42BPB-203ENST00000558867 VBP1P61758 197 aa13.52□□□□□ -0.25
CDC42BPB-203ENST00000558867 NCS1P62166 190 aa13.52□□□□□ -0.25
CDC42BPB-203ENST00000558867 ZNF154Q13106 437 aa13.52□□□□□ -0.25
CDC42BPB-203ENST00000558867 DGUOKQ16854 277 aa13.52□□□□□ -0.25
CDC42BPB-203ENST00000558867 SLC35F2Q8IXU6 374 aa13.52□□□□□ -0.25
CDC42BPB-203ENST00000558867 TIGD4Q8IY51 512 aa13.52□□□□□ -0.25
CDC42BPB-203ENST00000558867 OR10H4Q8NGA5 316 aa13.52□□□□□ -0.25
CDC42BPB-203ENST00000558867 SPRYD4Q8WW59 207 aaPredicted RBP13.52□□□□□ -0.25
CDC42BPB-203ENST00000558867 GATAD2BQ8WXI9 593 aa13.52□□□□□ -0.25
CDC42BPB-203ENST00000558867 OR51E2Q9H255 320 aa13.52□□□□□ -0.25
CDC42BPB-203ENST00000558867 TRIM36Q9NQ86 728 aa13.52□□□□□ -0.25
CDC42BPB-203ENST00000558867 CCDC59Q9P031 241 aaKnown RBP13.52□□□□□ -0.25
CDC42BPB-203ENST00000558867 NPTNQ9Y639 398 aa13.52□□□□□ -0.25
CDC42BPB-203ENST00000558867 IGLV1-36A0A0B4J1U3 117 aa13.51□□□□□ -0.25
CDC42BPB-203ENST00000558867 A0A1W2PQL4 384 aaPredicted RBP13.51□□□□□ -0.25
CDC42BPB-203ENST00000558867 PHYHO14832 338 aa13.51□□□□□ -0.25
CDC42BPB-203ENST00000558867 CLPXO76031 633 aa13.51□□□□□ -0.25
CDC42BPB-203ENST00000558867 ADH4P08319 380 aa13.51□□□□□ -0.25
CDC42BPB-203ENST00000558867 TNFSF4P23510 183 aa13.51□□□□□ -0.25
CDC42BPB-203ENST00000558867 ZFP36P26651 326 aaKnown RBP13.51□□□□□ -0.25
CDC42BPB-203ENST00000558867 STOMP27105 288 aa13.51□□□□□ -0.25
CDC42BPB-203ENST00000558867 CRABP1P29762 137 aa13.51□□□□□ -0.25
CDC42BPB-203ENST00000558867 MRPL28Q13084 256 aaKnown RBP13.51□□□□□ -0.25
CDC42BPB-203ENST00000558867 TRAM1Q15629 374 aa13.51□□□□□ -0.25
CDC42BPB-203ENST00000558867 LIPKQ5VXJ0 399 aa13.51□□□□□ -0.25
CDC42BPB-203ENST00000558867 DNM1P34Q6PK57 102 aa13.51□□□□□ -0.25
CDC42BPB-203ENST00000558867 VASH1Q7L8A9 365 aaPredicted RBP13.51□□□□□ -0.25
CDC42BPB-203ENST00000558867 KCTD20Q7Z5Y7 419 aa13.51□□□□□ -0.25
CDC42BPB-203ENST00000558867 OR6V1Q8N148 313 aa13.51□□□□□ -0.25
CDC42BPB-203ENST00000558867 LRRC18Q8N456 261 aa13.51□□□□□ -0.25
CDC42BPB-203ENST00000558867 DEFB108BQ8NET1 73 aa13.51□□□□□ -0.25
CDC42BPB-203ENST00000558867 NDNFQ8TB73 568 aa13.51□□□□□ -0.25
CDC42BPB-203ENST00000558867 FNDC8Q8TC99 324 aa13.51□□□□□ -0.25
CDC42BPB-203ENST00000558867 ZNRF4Q8WWF5 429 aa13.51□□□□□ -0.25
CDC42BPB-203ENST00000558867 DCSTAMPQ9H295 470 aa13.51□□□□□ -0.25
CDC42BPB-203ENST00000558867 SSR3Q9UNL2 185 aa13.51□□□□□ -0.25
CDC42BPB-203ENST00000558867 POLR3KQ9Y2Y1 108 aaPredicted RBP13.51□□□□□ -0.25
CDC42BPB-203ENST00000558867 TMEM14AQ9Y6G1 99 aa13.51□□□□□ -0.25
CDC42BPB-203ENST00000558867 VWFP04275 2813 aa13.51□□□□□ -0.25
CDC42BPB-203ENST00000558867 TRDV1A0A1B0GX56 115 aa13.5□□□□□ -0.25
CDC42BPB-203ENST00000558867 ZNF670-ZNF695F2Z2N8 137 aa13.5□□□□□ -0.25
CDC42BPB-203ENST00000558867 GPX5O75715 221 aa13.5□□□□□ -0.25
CDC42BPB-203ENST00000558867 LALBAP00709 142 aa13.5□□□□□ -0.25
CDC42BPB-203ENST00000558867 PGA4P0DJD7 388 aa13.5□□□□□ -0.25
CDC42BPB-203ENST00000558867 PGA3P0DJD8 388 aa13.5□□□□□ -0.25
CDC42BPB-203ENST00000558867 NR2C1P13056 603 aa13.5□□□□□ -0.25
CDC42BPB-203ENST00000558867 GDI2P50395 445 aaKnown RBP13.5□□□□□ -0.25
CDC42BPB-203ENST00000558867 MMP15P51511 669 aa13.5□□□□□ -0.25
CDC42BPB-203ENST00000558867 MELKQ14680 651 aa13.5□□□□□ -0.25
CDC42BPB-203ENST00000558867 TUSC1Q2TAM9 212 aa13.5□□□□□ -0.25
CDC42BPB-203ENST00000558867 CCDC58Q4VC31 144 aa13.5□□□□□ -0.25
CDC42BPB-203ENST00000558867 TMEM155Q4W5P6 130 aa13.5□□□□□ -0.25
CDC42BPB-203ENST00000558867 THEM4Q5T1C6 240 aa13.5□□□□□ -0.25
CDC42BPB-203ENST00000558867 ZNF684Q5T5D7 378 aa13.5□□□□□ -0.25
CDC42BPB-203ENST00000558867 MBNL2Q5VZF2 373 aaKnown RBP13.5□□□□□ -0.25
CDC42BPB-203ENST00000558867 ARL9Q6T311 187 aa13.5□□□□□ -0.25
CDC42BPB-203ENST00000558867 C17orf107Q6ZR85 190 aa13.5□□□□□ -0.25
CDC42BPB-203ENST00000558867 TBC1D15Q8TC07 691 aa13.5□□□□□ -0.25
CDC42BPB-203ENST00000558867 RPS4Y2Q8TD47 263 aa13.5□□□□□ -0.25
CDC42BPB-203ENST00000558867 GTF3AQ92664 365 aaKnown RBP13.5□□□□□ -0.25
CDC42BPB-203ENST00000558867 MCHR2Q969V1 340 aa13.5□□□□□ -0.25
CDC42BPB-203ENST00000558867 DCLRE1CQ96SD1 692 aaKnown RBP13.5□□□□□ -0.25
CDC42BPB-203ENST00000558867 CHCHD6Q9BRQ6 235 aa13.5□□□□□ -0.25
CDC42BPB-203ENST00000558867 C1QTNF5Q9BXJ0 243 aa13.5□□□□□ -0.25
CDC42BPB-203ENST00000558867 NXF2Q9GZY0 626 aaKnown RBP13.5□□□□□ -0.25
CDC42BPB-203ENST00000558867 SYT4Q9H2B2 425 aa13.5□□□□□ -0.25
CDC42BPB-203ENST00000558867 OR5V1Q9UGF6 321 aa13.5□□□□□ -0.25
CDC42BPB-203ENST00000558867 B9D1Q9UPM9 204 aa13.5□□□□□ -0.25
CDC42BPB-203ENST00000558867 INSIG2Q9Y5U4 225 aa13.5□□□□□ -0.25
CDC42BPB-203ENST00000558867 C5orf49A4QMS7 147 aa13.49□□□□□ -0.25
CDC42BPB-203ENST00000558867 DCTN6O00399 190 aa13.49□□□□□ -0.25
CDC42BPB-203ENST00000558867 HLA-DPB1P04440 258 aa13.49□□□□□ -0.25
CDC42BPB-203ENST00000558867 MRPL3P09001 348 aaKnown RBP13.49□□□□□ -0.25
CDC42BPB-203ENST00000558867 ZNF12P17014 697 aa13.49□□□□□ -0.25
CDC42BPB-203ENST00000558867 TNFRSF1AP19438 455 aa13.49□□□□□ -0.25
CDC42BPB-203ENST00000558867 GUCA1AP43080 201 aaPredicted RBP13.49□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms