RNA–Protein interactions for RNA: ENST00000558745.5

TSPAN3-205, Transcript of tetraspanin 3, humanhuman

TSL 5 BASIC

Gene TSPAN3, Length 1,340 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN3-205ENST00000558745 ZNF91Q05481 1191 aa11.61□□□□□ -0.55
TSPAN3-205ENST00000558745 PRDX4Q13162 271 aa11.61□□□□□ -0.55
TSPAN3-205ENST00000558745 ZNF829Q3KNS6 432 aaPredicted RBP11.61□□□□□ -0.55
TSPAN3-205ENST00000558745 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP11.61□□□□□ -0.552e-6■■■□□ 15.9
TSPAN3-205ENST00000558745 PEG10Q86TG7 708 aaKnown RBP11.61□□□□□ -0.55
TSPAN3-205ENST00000558745 LHFPL3Q86UP9 236 aa11.61□□□□□ -0.55
TSPAN3-205ENST00000558745 LRRC28Q86X40 367 aaPredicted RBP11.61□□□□□ -0.55
TSPAN3-205ENST00000558745 DEFB108BQ8NET1 73 aa11.61□□□□□ -0.55
TSPAN3-205ENST00000558745 OR8S1Q8NH09 359 aa11.61□□□□□ -0.55
TSPAN3-205ENST00000558745 CNIH3Q8TBE1 160 aa11.61□□□□□ -0.55
TSPAN3-205ENST00000558745 RORBQ92753 470 aa11.61□□□□□ -0.55
TSPAN3-205ENST00000558745 RNF166Q96A37 237 aaPredicted RBP11.61□□□□□ -0.55
TSPAN3-205ENST00000558745 PAPOLGQ9BWT3 736 aaKnown RBP11.61□□□□□ -0.55
TSPAN3-205ENST00000558745 SLC22A4Q9H015 551 aa11.61□□□□□ -0.55
TSPAN3-205ENST00000558745 GNG8Q9UK08 70 aa11.61□□□□□ -0.55
TSPAN3-205ENST00000558745 A0A0U1RQV5 110 aa11.6□□□□□ -0.55
TSPAN3-205ENST00000558745 DAPL1A0PJW8 107 aa11.6□□□□□ -0.55
TSPAN3-205ENST00000558745 ACOD1A6NK06 481 aa11.6□□□□□ -0.55
TSPAN3-205ENST00000558745 CASQ2O14958 399 aaPredicted RBP11.6□□□□□ -0.55
TSPAN3-205ENST00000558745 PLPP2O43688 288 aa11.6□□□□□ -0.55
TSPAN3-205ENST00000558745 CRLF1O75462 422 aa11.6□□□□□ -0.55
TSPAN3-205ENST00000558745 CFL1P23528 166 aaKnown RBP11.6□□□□□ -0.55
TSPAN3-205ENST00000558745 ZFP36P26651 326 aaKnown RBP11.6□□□□□ -0.55
TSPAN3-205ENST00000558745 CD80P33681 288 aa11.6□□□□□ -0.55
TSPAN3-205ENST00000558745 THBS2P35442 1172 aa11.6□□□□□ -0.55
TSPAN3-205ENST00000558745 GNALP38405 381 aa11.6□□□□□ -0.55
TSPAN3-205ENST00000558745 GATA4P43694 442 aa11.6□□□□□ -0.55
TSPAN3-205ENST00000558745 OR12D2P58182 307 aa11.6□□□□□ -0.55
TSPAN3-205ENST00000558745 BTG1P62324 171 aa11.6□□□□□ -0.55
TSPAN3-205ENST00000558745 CSNK2BP67870 215 aa11.6□□□□□ -0.55
TSPAN3-205ENST00000558745 BCL2L15Q5TBC7 163 aa11.6□□□□□ -0.55
TSPAN3-205ENST00000558745 ZNF691Q5VV52 312 aa11.6□□□□□ -0.55
TSPAN3-205ENST00000558745 SFRP4Q6FHJ7 346 aaPredicted RBP11.6□□□□□ -0.55
TSPAN3-205ENST00000558745 FAM166AQ6J272 317 aa11.6□□□□□ -0.55
TSPAN3-205ENST00000558745 LYPD2Q6UXB3 125 aa11.6□□□□□ -0.55
TSPAN3-205ENST00000558745 CATSPERDQ86XM0 798 aa11.6□□□□□ -0.55
TSPAN3-205ENST00000558745 ELMOD2Q8IZ81 293 aa11.6□□□□□ -0.55
TSPAN3-205ENST00000558745 RDH10Q8IZV5 341 aa11.6□□□□□ -0.55
TSPAN3-205ENST00000558745 PRSS35Q8N3Z0 413 aa11.6□□□□□ -0.55
TSPAN3-205ENST00000558745 CELF2-AS1Q8N7Q2 184 aa11.6□□□□□ -0.55
TSPAN3-205ENST00000558745 CSNK2A3Q8NEV1 391 aa11.6□□□□□ -0.55
TSPAN3-205ENST00000558745 NRG4Q8WWG1 115 aa11.6□□□□□ -0.55
TSPAN3-205ENST00000558745 DCLRE1BQ9H816 532 aa11.6□□□□□ -0.55
TSPAN3-205ENST00000558745 ACOXLQ9NUZ1 547 aa11.6□□□□□ -0.55
TSPAN3-205ENST00000558745 KCNS2Q9ULS6 477 aa11.6□□□□□ -0.55
TSPAN3-205ENST00000558745 SNX5Q9Y5X3 404 aa11.6□□□□□ -0.55
TSPAN3-205ENST00000558745 PPIAL4EA0A075B759 164 aa11.6□□□□□ -0.55
TSPAN3-205ENST00000558745 A6NLC8 198 aa11.6□□□□□ -0.55
TSPAN3-205ENST00000558745 B4DSR2 109 aa11.6□□□□□ -0.55
TSPAN3-205ENST00000558745 PPIAL4DF5H284 164 aa11.6□□□□□ -0.55
TSPAN3-205ENST00000558745 MPZL2O60487 215 aa11.6□□□□□ -0.55
TSPAN3-205ENST00000558745 PTBP3O95758 552 aaKnown RBP11.6□□□□□ -0.55
TSPAN3-205ENST00000558745 CST4P01036 141 aa11.6□□□□□ -0.55
TSPAN3-205ENST00000558745 PPIAL4FP0DN26 164 aa11.6□□□□□ -0.55
TSPAN3-205ENST00000558745 FAHP16930 419 aa11.6□□□□□ -0.55
TSPAN3-205ENST00000558745 EGR1P18146 543 aa11.6□□□□□ -0.55
TSPAN3-205ENST00000558745 SLC34A1Q06495 639 aa11.6□□□□□ -0.55
TSPAN3-205ENST00000558745 CR1LQ2VPA4 569 aa11.6□□□□□ -0.55
TSPAN3-205ENST00000558745 WDR38Q5JTN6 314 aa11.6□□□□□ -0.55
TSPAN3-205ENST00000558745 CEP78Q5JTW2 689 aa11.6□□□□□ -0.55
TSPAN3-205ENST00000558745 MOB3CQ70IA8 216 aa11.6□□□□□ -0.55
TSPAN3-205ENST00000558745 DHRSXQ8N5I4 330 aa11.6□□□□□ -0.55
TSPAN3-205ENST00000558745 PACRGLQ8N7B6 248 aa11.6□□□□□ -0.55
TSPAN3-205ENST00000558745 SPERTQ8NA61 448 aa11.6□□□□□ -0.55
TSPAN3-205ENST00000558745 SEMA6DQ8NFY4 1073 aa11.6□□□□□ -0.55
TSPAN3-205ENST00000558745 OR1M1Q8NGA1 313 aa11.6□□□□□ -0.55
TSPAN3-205ENST00000558745 OR52I1Q8NGK6 324 aa11.6□□□□□ -0.55
TSPAN3-205ENST00000558745 ITPKCQ96DU7 683 aa11.6□□□□□ -0.55
TSPAN3-205ENST00000558745 SEH1LQ96EE3 360 aa11.6□□□□□ -0.55
TSPAN3-205ENST00000558745 RNF170Q96K19 258 aa11.6□□□□□ -0.55
TSPAN3-205ENST00000558745 Q96MT0 163 aa11.6□□□□□ -0.55
TSPAN3-205ENST00000558745 RDH12Q96NR8 316 aa11.6□□□□□ -0.55
TSPAN3-205ENST00000558745 TMEM246Q9BRR3 403 aa11.6□□□□□ -0.55
TSPAN3-205ENST00000558745 ISG20L2Q9H9L3 353 aaKnown RBP11.6□□□□□ -0.55
TSPAN3-205ENST00000558745 FN3KRPQ9HA64 309 aa11.6□□□□□ -0.55
TSPAN3-205ENST00000558745 HIF1ANQ9NWT6 349 aa11.6□□□□□ -0.55
TSPAN3-205ENST00000558745 RNF7Q9UBF6 113 aa11.6□□□□□ -0.55
TSPAN3-205ENST00000558745 PCDHB10Q9UN67 800 aa11.6□□□□□ -0.55
TSPAN3-205ENST00000558745 PIGLQ9Y2B2 252 aa11.6□□□□□ -0.55
TSPAN3-205ENST00000558745 PPIAL4AQ9Y536 164 aa11.6□□□□□ -0.55
TSPAN3-205ENST00000558745 NBEAL1Q6ZS30 2694 aa11.59□□□□□ -0.55
TSPAN3-205ENST00000558745 COL6A5A8TX70 2615 aa11.59□□□□□ -0.55
TSPAN3-205ENST00000558745 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP11.59□□□□□ -0.55
TSPAN3-205ENST00000558745 LRRC30A6NM36 301 aa11.59□□□□□ -0.55
TSPAN3-205ENST00000558745 J3QLW9 94 aa11.59□□□□□ -0.55
TSPAN3-205ENST00000558745 CDIPTO14735 213 aa11.59□□□□□ -0.55
TSPAN3-205ENST00000558745 SULT1C4O75897 302 aa11.59□□□□□ -0.55
TSPAN3-205ENST00000558745 MSMBP08118 114 aa11.59□□□□□ -0.55
TSPAN3-205ENST00000558745 GNAO1P09471 354 aa11.59□□□□□ -0.55
TSPAN3-205ENST00000558745 IRF2P14316 349 aa11.59□□□□□ -0.55
TSPAN3-205ENST00000558745 ZNF19P17023 458 aa11.59□□□□□ -0.55
TSPAN3-205ENST00000558745 KIR3DL2P43630 455 aa11.59□□□□□ -0.55
TSPAN3-205ENST00000558745 MAP2K3P46734 347 aa11.59□□□□□ -0.55
TSPAN3-205ENST00000558745 NANOS3P60323 173 aaKnown RBP11.59□□□□□ -0.55
TSPAN3-205ENST00000558745 GMFBP60983 142 aa11.59□□□□□ -0.55
TSPAN3-205ENST00000558745 ISL1P61371 349 aa11.59□□□□□ -0.55
TSPAN3-205ENST00000558745 LCN2P80188 198 aa11.59□□□□□ -0.55
TSPAN3-205ENST00000558745 ZNF154Q13106 437 aa11.59□□□□□ -0.55
TSPAN3-205ENST00000558745 ZNF181Q2M3W8 571 aa11.59□□□□□ -0.55
TSPAN3-205ENST00000558745 CDONQ4KMG0 1287 aa11.59□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 87.5 ms