RNA–Protein interactions for RNA: ENST00000558474.1

VPS18-202, Transcript of VPS18, CORVET/HOPS core subunit, humanhuman

TSL 3 BASIC

Gene VPS18, Length 873 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS18-202ENST00000558474 J3QKU1 62 aa12.77□□□□□ -0.37
VPS18-202ENST00000558474 LMX1BO60663 402 aa12.77□□□□□ -0.37
VPS18-202ENST00000558474 IGHV3-13P01766 116 aa12.77□□□□□ -0.37
VPS18-202ENST00000558474 PLA2G2AP14555 144 aa12.77□□□□□ -0.37
VPS18-202ENST00000558474 FAHP16930 419 aa12.77□□□□□ -0.37
VPS18-202ENST00000558474 BDKRB2P30411 391 aa12.77□□□□□ -0.37
VPS18-202ENST00000558474 TGFBR1P36897 503 aa12.77□□□□□ -0.37
VPS18-202ENST00000558474 RPS19P39019 145 aaKnown RBP12.77□□□□□ -0.37
VPS18-202ENST00000558474 EVX1P49640 407 aa12.77□□□□□ -0.37
VPS18-202ENST00000558474 PSG7Q13046 419 aa12.77□□□□□ -0.37
VPS18-202ENST00000558474 DYNC1I2Q13409 638 aaKnown RBP12.77□□□□□ -0.37
VPS18-202ENST00000558474 DAZAP2Q15038 168 aaPredicted RBP12.77□□□□□ -0.37
VPS18-202ENST00000558474 CNN3Q15417 329 aaKnown RBP12.77□□□□□ -0.37
VPS18-202ENST00000558474 DGUOKQ16854 277 aa12.77□□□□□ -0.37
VPS18-202ENST00000558474 GLT8D1Q68CQ7 371 aa12.77□□□□□ -0.37
VPS18-202ENST00000558474 ASPHD2Q6ICH7 369 aa12.77□□□□□ -0.37
VPS18-202ENST00000558474 SLC22A25Q6T423 547 aa12.77□□□□□ -0.37
VPS18-202ENST00000558474 LRRTM1Q86UE6 522 aa12.77□□□□□ -0.37
VPS18-202ENST00000558474 OR1M1Q8NGA1 313 aa12.77□□□□□ -0.37
VPS18-202ENST00000558474 OR56B2PQ8NGI1 322 aa12.77□□□□□ -0.37
VPS18-202ENST00000558474 SYNPRQ8TBG9 265 aa12.77□□□□□ -0.37
VPS18-202ENST00000558474 TMEM171Q8WVE6 324 aa12.77□□□□□ -0.37
VPS18-202ENST00000558474 TMEM204Q9BSN7 226 aa12.77□□□□□ -0.37
VPS18-202ENST00000558474 MRI1Q9BV20 369 aa12.77□□□□□ -0.37
VPS18-202ENST00000558474 OR51B6Q9H340 312 aa12.77□□□□□ -0.37
VPS18-202ENST00000558474 TAS2R4Q9NYW5 299 aa12.77□□□□□ -0.37
VPS18-202ENST00000558474 PTTG2Q9NZH5 202 aa12.77□□□□□ -0.37
VPS18-202ENST00000558474 CMAHPQ9Y471 501 aa12.77□□□□□ -0.37
VPS18-202ENST00000558474 RNF115Q9Y4L5 304 aa12.77□□□□□ -0.37
VPS18-202ENST00000558474 A3GALT2U3KPV4 340 aa12.77□□□□□ -0.37
VPS18-202ENST00000558474 RTTNQ86VV8 2226 aa12.77□□□□□ -0.37
VPS18-202ENST00000558474 TRAV8-7A0A075B6U6 113 aa12.76□□□□□ -0.37
VPS18-202ENST00000558474 A0A1W2PPW3 197 aa12.76□□□□□ -0.37
VPS18-202ENST00000558474 SHISA3A0PJX4 238 aa12.76□□□□□ -0.37
VPS18-202ENST00000558474 ANXA2P2A6NMY6 339 aa12.76□□□□□ -0.37
VPS18-202ENST00000558474 NOTOA8MTQ0 251 aa12.76□□□□□ -0.37
VPS18-202ENST00000558474 DEFB108AA8MXU0 73 aa12.76□□□□□ -0.37
VPS18-202ENST00000558474 MAGEB3O15480 346 aa12.76□□□□□ -0.37
VPS18-202ENST00000558474 GMDSO60547 372 aa12.76□□□□□ -0.37
VPS18-202ENST00000558474 NRASP01111 189 aa12.76□□□□□ -0.37
VPS18-202ENST00000558474 PRF1P14222 555 aa12.76□□□□□ -0.37
VPS18-202ENST00000558474 ATF1P18846 271 aa12.76□□□□□ -0.37
VPS18-202ENST00000558474 PRKACBP22694 351 aa12.76□□□□□ -0.37
VPS18-202ENST00000558474 ERVS71-1P61550 626 aa12.76□□□□□ -0.37
VPS18-202ENST00000558474 SPATA46Q5T0L3 261 aa12.76□□□□□ -0.37
VPS18-202ENST00000558474 DNAAF1Q8NEP3 725 aa12.76□□□□□ -0.37
VPS18-202ENST00000558474 UBASH3BQ8TF42 649 aa12.76□□□□□ -0.37
VPS18-202ENST00000558474 AP3S1Q92572 193 aa12.76□□□□□ -0.37
VPS18-202ENST00000558474 KCTD12Q96CX2 325 aaKnown RBP12.76□□□□□ -0.37
VPS18-202ENST00000558474 SPOCK3Q9BQ16 436 aa12.76□□□□□ -0.37
VPS18-202ENST00000558474 CYSLTR2Q9NS75 346 aa12.76□□□□□ -0.37
VPS18-202ENST00000558474 CA10Q9NS85 328 aa12.76□□□□□ -0.37
VPS18-202ENST00000558474 CRIM1Q9NZV1 1036 aa12.76□□□□□ -0.37
VPS18-202ENST00000558474 PURGQ9UJV8 347 aaKnown RBP12.76□□□□□ -0.37
VPS18-202ENST00000558474 V9GY05 133 aa12.76□□□□□ -0.37
VPS18-202ENST00000558474 A0A1B0GWJ7 208 aa12.75□□□□□ -0.37
VPS18-202ENST00000558474 SHISA9B4DS77 424 aa12.75□□□□□ -0.37
VPS18-202ENST00000558474 MAS1P04201 325 aa12.75□□□□□ -0.37
VPS18-202ENST00000558474 ZNF182P17025 639 aaPredicted RBP12.75□□□□□ -0.37
VPS18-202ENST00000558474 LOXP28300 417 aaPredicted RBP12.75□□□□□ -0.37
VPS18-202ENST00000558474 FUT6P51993 359 aa12.75□□□□□ -0.37
VPS18-202ENST00000558474 CAPZA1P52907 286 aa12.75□□□□□ -0.37
VPS18-202ENST00000558474 KLF3P57682 345 aaPredicted RBP12.75□□□□□ -0.37
VPS18-202ENST00000558474 SPOCK1Q08629 439 aa12.75□□□□□ -0.37
VPS18-202ENST00000558474 CEP78Q5JTW2 689 aa12.75□□□□□ -0.37
VPS18-202ENST00000558474 OR2T2Q6IF00 324 aa12.75□□□□□ -0.37
VPS18-202ENST00000558474 ADAM5Q6NVV9 412 aa12.75□□□□□ -0.37
VPS18-202ENST00000558474 OR8G5Q8NG78 346 aa12.75□□□□□ -0.37
VPS18-202ENST00000558474 MRPL24Q96A35 216 aaKnown RBP12.75□□□□□ -0.37
VPS18-202ENST00000558474 UQCC2Q9BRT2 126 aa12.75□□□□□ -0.37
VPS18-202ENST00000558474 GPR160Q9UJ42 338 aa12.75□□□□□ -0.37
VPS18-202ENST00000558474 POU2F3Q9UKI9 436 aa12.75□□□□□ -0.37
VPS18-202ENST00000558474 SLC7A11Q9UPY5 501 aa12.75□□□□□ -0.37
VPS18-202ENST00000558474 ATP23Q9Y6H3 246 aa12.75□□□□□ -0.37
VPS18-202ENST00000558474 OCMP0CE72 109 aaPredicted RBP12.74□□□□□ -0.37
VPS18-202ENST00000558474 ADRA2CP18825 462 aa12.74□□□□□ -0.37
VPS18-202ENST00000558474 MPV17P39210 176 aa12.74□□□□□ -0.37
VPS18-202ENST00000558474 FABP6P51161 128 aa12.74□□□□□ -0.37
VPS18-202ENST00000558474 SCAND1P57086 179 aa12.74□□□□□ -0.37
VPS18-202ENST00000558474 MXD1Q05195 221 aa12.74□□□□□ -0.37
VPS18-202ENST00000558474 SRSF1Q07955 248 aaKnown RBP eCLIP12.74□□□□□ -0.37
VPS18-202ENST00000558474 MZT1Q08AG7 82 aa12.74□□□□□ -0.37
VPS18-202ENST00000558474 RIN1Q13671 783 aa12.74□□□□□ -0.37
VPS18-202ENST00000558474 SNTB1Q13884 538 aaKnown RBP12.74□□□□□ -0.37
VPS18-202ENST00000558474 UBE2V2Q15819 145 aa12.74□□□□□ -0.37
VPS18-202ENST00000558474 CEACAM21Q3KPI0 293 aa12.74□□□□□ -0.37
VPS18-202ENST00000558474 SFXN4Q6P4A7 337 aa12.74□□□□□ -0.37
VPS18-202ENST00000558474 LINC00299Q6ZSB3 139 aa12.74□□□□□ -0.37
VPS18-202ENST00000558474 LHFPL2Q6ZUX7 228 aa12.74□□□□□ -0.37
VPS18-202ENST00000558474 ZDHHC23Q8IYP9 409 aa12.74□□□□□ -0.37
VPS18-202ENST00000558474 OR5AS1Q8N127 324 aa12.74□□□□□ -0.37
VPS18-202ENST00000558474 SPERTQ8NA61 448 aa12.74□□□□□ -0.37
VPS18-202ENST00000558474 OR5A2Q8NGI9 324 aa12.74□□□□□ -0.37
VPS18-202ENST00000558474 OR13C9Q8NGT0 318 aa12.74□□□□□ -0.37
VPS18-202ENST00000558474 ACOT12Q8WYK0 555 aa12.74□□□□□ -0.37
VPS18-202ENST00000558474 PIGCQ92535 297 aa12.74□□□□□ -0.37
VPS18-202ENST00000558474 ORAI1Q96D31 301 aa12.74□□□□□ -0.37
VPS18-202ENST00000558474 HIST1H2AAQ96QV6 131 aa12.74□□□□□ -0.37
VPS18-202ENST00000558474 SLC30A2Q9BRI3 323 aa12.74□□□□□ -0.37
VPS18-202ENST00000558474 PAPOLGQ9BWT3 736 aaKnown RBP12.74□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms