RNA–Protein interactions for RNA: ENST00000556648.1

TMEM260-211, Transcript of transmembrane protein 260, humanhuman

TSL 2

Gene TMEM260, Length 2,013 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM260-211ENST00000556648 CAPZA1P52907 286 aa8.85□□□□□ -0.99
TMEM260-211ENST00000556648 PER3P56645 1201 aa8.85□□□□□ -0.99
TMEM260-211ENST00000556648 CLDN18P56856 261 aa8.85□□□□□ -0.99
TMEM260-211ENST00000556648 TSPAN5P62079 268 aa8.85□□□□□ -0.99
TMEM260-211ENST00000556648 TGIF1Q15583 401 aa8.85□□□□□ -0.99
TMEM260-211ENST00000556648 C4orf46Q504U0 113 aa8.85□□□□□ -0.99
TMEM260-211ENST00000556648 OR2W3Q7Z3T1 314 aa8.85□□□□□ -0.99
TMEM260-211ENST00000556648 FTMTQ8N4E7 242 aa8.85□□□□□ -0.99
TMEM260-211ENST00000556648 OR2AK2Q8NG84 335 aa8.85□□□□□ -0.99
TMEM260-211ENST00000556648 OR8H1Q8NGG4 311 aa8.85□□□□□ -0.99
TMEM260-211ENST00000556648 OR1F12Q8NHA8 337 aa8.85□□□□□ -0.99
TMEM260-211ENST00000556648 CPT1CQ8TCG5 803 aa8.85□□□□□ -0.99
TMEM260-211ENST00000556648 SPTSSAQ969W0 71 aa8.85□□□□□ -0.99
TMEM260-211ENST00000556648 FOXB1Q99853 325 aa8.85□□□□□ -0.99
TMEM260-211ENST00000556648 TMEM59Q9BXS4 323 aa8.85□□□□□ -0.99
TMEM260-211ENST00000556648 TTTY12Q9BZ98 90 aa8.85□□□□□ -0.99
TMEM260-211ENST00000556648 MRPS18CQ9Y3D5 142 aaKnown RBP8.85□□□□□ -0.99
TMEM260-211ENST00000556648 MED13Q9UHV7 2174 aa8.84□□□□□ -0.99
TMEM260-211ENST00000556648 OR6C6A6NF89 314 aa8.84□□□□□ -0.99
TMEM260-211ENST00000556648 STMND1H3BQB6 276 aa8.84□□□□□ -0.99
TMEM260-211ENST00000556648 MPC2O95563 127 aa8.84□□□□□ -0.99
TMEM260-211ENST00000556648 PMP2P02689 132 aa8.84□□□□□ -0.99
TMEM260-211ENST00000556648 GIPP09681 153 aaPredicted RBP8.84□□□□□ -0.99
TMEM260-211ENST00000556648 HRH1P35367 487 aa8.84□□□□□ -0.99
TMEM260-211ENST00000556648 FOXG1P55316 489 aaPredicted RBP8.84□□□□□ -0.99
TMEM260-211ENST00000556648 TMEM50BP56557 158 aa8.84□□□□□ -0.99
TMEM260-211ENST00000556648 PSG4Q00888 419 aa8.84□□□□□ -0.99
TMEM260-211ENST00000556648 KISS1Q15726 138 aa8.84□□□□□ -0.99
TMEM260-211ENST00000556648 TSPO2Q5TGU0 170 aa8.84□□□□□ -0.99
TMEM260-211ENST00000556648 C9orf135Q5VTT2 229 aa8.84□□□□□ -0.99
TMEM260-211ENST00000556648 JMJD6Q6NYC1 403 aaPredicted RBP8.84□□□□□ -0.99
TMEM260-211ENST00000556648 SKA3Q8IX90 412 aa8.84□□□□□ -0.99
TMEM260-211ENST00000556648 TMEM251Q8N6I4 163 aa8.84□□□□□ -0.99
TMEM260-211ENST00000556648 CDC6Q99741 560 aa8.84□□□□□ -0.99
TMEM260-211ENST00000556648 CHST5Q9GZS9 411 aa8.84□□□□□ -0.99
TMEM260-211ENST00000556648 OR10A2Q9H208 303 aa8.84□□□□□ -0.99
TMEM260-211ENST00000556648 SLCO5A1Q9H2Y9 848 aa8.84□□□□□ -0.99
TMEM260-211ENST00000556648 IFT46Q9NQC8 304 aa8.84□□□□□ -0.99
TMEM260-211ENST00000556648 PTTG3PQ9NZH4 202 aa8.84□□□□□ -0.99
TMEM260-211ENST00000556648 PCDHGA1Q9Y5H4 931 aa8.84□□□□□ -0.99
TMEM260-211ENST00000556648 LIPGQ9Y5X9 500 aa8.84□□□□□ -0.99
TMEM260-211ENST00000556648 RTTNQ86VV8 2226 aa8.84□□□□□ -0.99
TMEM260-211ENST00000556648 BDP1A6H8Y1 2624 aa8.84□□□□□ -0.99
TMEM260-211ENST00000556648 UBE2QL1A1L167 161 aa8.83□□□□□ -1
TMEM260-211ENST00000556648 ANKRD34BA5PLL1 514 aa8.83□□□□□ -1
TMEM260-211ENST00000556648 OR2A4O95047 310 aa8.83□□□□□ -1
TMEM260-211ENST00000556648 HPNP05981 417 aa8.83□□□□□ -1
TMEM260-211ENST00000556648 OR4E1P0C645 316 aa8.83□□□□□ -1
TMEM260-211ENST00000556648 FCGR2AP12318 317 aa8.83□□□□□ -1
TMEM260-211ENST00000556648 HIST1H1DP16402 221 aaKnown RBP8.83□□□□□ -1
TMEM260-211ENST00000556648 CXCL2P19875 107 aa8.83□□□□□ -1
TMEM260-211ENST00000556648 SERPINA2P20848 420 aa8.83□□□□□ -1
TMEM260-211ENST00000556648 S100A1P23297 94 aa8.83□□□□□ -1
TMEM260-211ENST00000556648 PTGFRP43088 359 aa8.83□□□□□ -1
TMEM260-211ENST00000556648 HTR5AP47898 357 aa8.83□□□□□ -1
TMEM260-211ENST00000556648 ECH1Q13011 328 aa8.83□□□□□ -1
TMEM260-211ENST00000556648 SRSF6Q13247 344 aaKnown RBP8.83□□□□□ -1
TMEM260-211ENST00000556648 EIF3IQ13347 325 aaKnown RBP8.83□□□□□ -1
TMEM260-211ENST00000556648 KRTAP27-1Q3LI81 207 aa8.83□□□□□ -1
TMEM260-211ENST00000556648 Q6ZSR3 168 aa8.83□□□□□ -1
TMEM260-211ENST00000556648 CDH26Q8IXH8 852 aa8.83□□□□□ -1
TMEM260-211ENST00000556648 TNFAIP8L1Q8WVP5 186 aa8.83□□□□□ -1
TMEM260-211ENST00000556648 CPNE4Q96A23 557 aaPredicted RBP8.83□□□□□ -1
TMEM260-211ENST00000556648 RAB3CQ96E17 227 aa8.83□□□□□ -1
TMEM260-211ENST00000556648 REEP6Q96HR9 211 aa8.83□□□□□ -1
TMEM260-211ENST00000556648 ARHGAP5-AS1Q96IT6 56 aa8.83□□□□□ -1
TMEM260-211ENST00000556648 OR2A7Q96R45 310 aa8.83□□□□□ -1
TMEM260-211ENST00000556648 DPCDQ9BVM2 203 aaPredicted RBP8.83□□□□□ -1
TMEM260-211ENST00000556648 OR2H1Q9GZK4 316 aa8.83□□□□□ -1
TMEM260-211ENST00000556648 FN3KRPQ9HA64 309 aa8.83□□□□□ -1
TMEM260-211ENST00000556648 PARD6AQ9NPB6 346 aa8.83□□□□□ -1
TMEM260-211ENST00000556648 AHCTF1Q8WYP5 2266 aa8.83□□□□□ -1
TMEM260-211ENST00000556648 OR2AT4A6NND4 320 aa8.83□□□□□ -1
TMEM260-211ENST00000556648 MFNGO00587 321 aa8.83□□□□□ -1
TMEM260-211ENST00000556648 GNG2P59768 71 aa8.83□□□□□ -1
TMEM260-211ENST00000556648 PLGLB1Q02325 96 aa8.83□□□□□ -1
TMEM260-211ENST00000556648 RNASE10Q5GAN6 216 aaKnown RBP8.83□□□□□ -1
TMEM260-211ENST00000556648 ZNF767PQ75MW2 155 aa8.83□□□□□ -1
TMEM260-211ENST00000556648 SLC16A14Q7RTX9 510 aa8.83□□□□□ -1
TMEM260-211ENST00000556648 GALNTL5Q7Z4T8 443 aa8.83□□□□□ -1
TMEM260-211ENST00000556648 KCNG3Q8TAE7 436 aa8.83□□□□□ -1
TMEM260-211ENST00000556648 PCNPQ8WW12 178 aaKnown RBP8.83□□□□□ -1
TMEM260-211ENST00000556648 MAFIPQ8WZ33 124 aa8.83□□□□□ -1
TMEM260-211ENST00000556648 ZNF581Q9P0T4 197 aa8.83□□□□□ -1
TMEM260-211ENST00000556648 ZNF107Q9UII5 783 aaPredicted RBP8.83□□□□□ -1
TMEM260-211ENST00000556648 IGKV1-27A0A075B6S5 117 aa8.82□□□□□ -1
TMEM260-211ENST00000556648 PLSCR5A0PG75 271 aa8.82□□□□□ -1
TMEM260-211ENST00000556648 FOXI3A8MTJ6 420 aaPredicted RBP8.82□□□□□ -1
TMEM260-211ENST00000556648 DISC1C4P0D8 188 aa8.82□□□□□ -1
TMEM260-211ENST00000556648 CFDP00746 253 aaPredicted RBP8.82□□□□□ -1
TMEM260-211ENST00000556648 PLATP00750 562 aa8.82□□□□□ -1
TMEM260-211ENST00000556648 LCATP04180 440 aa8.82□□□□□ -1
TMEM260-211ENST00000556648 MGMTP16455 207 aa8.82□□□□□ -1
TMEM260-211ENST00000556648 ZNF708P17019 499 aa8.82□□□□□ -1
TMEM260-211ENST00000556648 MEOX1P50221 254 aa8.82□□□□□ -1
TMEM260-211ENST00000556648 RAP2BP61225 183 aa8.82□□□□□ -1
TMEM260-211ENST00000556648 RPS27AP62979 156 aaKnown RBP8.82□□□□□ -1
TMEM260-211ENST00000556648 CXADRP78310 365 aa8.82□□□□□ -1
TMEM260-211ENST00000556648 DHODHQ02127 395 aa8.82□□□□□ -1
TMEM260-211ENST00000556648 SCRN3Q0VDG4 424 aa8.82□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms