RNA–Protein interactions for RNA: ENST00000556256.1

SCFD1-218, Transcript of sec1 family domain containing 1, humanhuman

TSL 2

Gene SCFD1, Length 428 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-218ENST00000556256 TCP1P17987 556 aaKnown RBP1.49□□□□□ -2.17
SCFD1-218ENST00000556256 GGT2P36268 569 aa1.49□□□□□ -2.17
SCFD1-218ENST00000556256 OR1G1P47890 313 aa1.49□□□□□ -2.17
SCFD1-218ENST00000556256 UBE2E1P51965 193 aa1.49□□□□□ -2.17
SCFD1-218ENST00000556256 CLDN6P56747 220 aa1.49□□□□□ -2.17
SCFD1-218ENST00000556256 ATP6V0D1P61421 351 aa1.49□□□□□ -2.17
SCFD1-218ENST00000556256 KDSRQ06136 332 aa1.49□□□□□ -2.17
SCFD1-218ENST00000556256 PIGHQ14442 188 aaPredicted RBP1.49□□□□□ -2.17
SCFD1-218ENST00000556256 OR1Q1Q15612 314 aa1.49□□□□□ -2.17
SCFD1-218ENST00000556256 IGFBP7Q16270 282 aa1.49□□□□□ -2.17
SCFD1-218ENST00000556256 CCL15Q16663 113 aa1.49□□□□□ -2.17
SCFD1-218ENST00000556256 KDM4DQ6B0I6 523 aa1.49□□□□□ -2.17
SCFD1-218ENST00000556256 SLC25A34Q6PIV7 304 aa1.49□□□□□ -2.17
SCFD1-218ENST00000556256 CD300LGQ6UXG3 332 aa1.49□□□□□ -2.17
SCFD1-218ENST00000556256 MRPL21Q7Z2W9 205 aaKnown RBP1.49□□□□□ -2.17
SCFD1-218ENST00000556256 DRAM1Q8N682 238 aa1.49□□□□□ -2.17
SCFD1-218ENST00000556256 MIR7-3HGQ8N6C7 128 aa1.49□□□□□ -2.17
SCFD1-218ENST00000556256 UBAC2Q8NBM4 344 aa1.49□□□□□ -2.17
SCFD1-218ENST00000556256 PROKR2Q8NFJ6 384 aa1.49□□□□□ -2.17
SCFD1-218ENST00000556256 OR1L1Q8NH94 360 aa1.49□□□□□ -2.17
SCFD1-218ENST00000556256 ENKURQ8TC29 256 aa1.49□□□□□ -2.17
SCFD1-218ENST00000556256 CA5BP1Q8WTZ4 195 aa1.49□□□□□ -2.17
SCFD1-218ENST00000556256 GHSRQ92847 366 aa1.49□□□□□ -2.17
SCFD1-218ENST00000556256 SMARCD1Q96GM5 515 aa1.49□□□□□ -2.17
SCFD1-218ENST00000556256 UBE2E2Q96LR5 201 aa1.49□□□□□ -2.17
SCFD1-218ENST00000556256 OR4K3Q96R72 315 aa1.49□□□□□ -2.17
SCFD1-218ENST00000556256 ZSCAN16Q9H4T2 348 aaPredicted RBP1.49□□□□□ -2.17
SCFD1-218ENST00000556256 RHBDL2Q9NX52 303 aa1.49□□□□□ -2.17
SCFD1-218ENST00000556256 C21orf62Q9NYP8 219 aa1.49□□□□□ -2.17
SCFD1-218ENST00000556256 HES2Q9Y543 173 aa1.49□□□□□ -2.17
SCFD1-218ENST00000556256 OR51B2Q9Y5P1 312 aa1.49□□□□□ -2.17
SCFD1-218ENST00000556256 ITGB4P16144 1822 aa1.49□□□□□ -2.17
SCFD1-218ENST00000556256 PLEKHG2Q9H7P9 1386 aa1.48□□□□□ -2.17
SCFD1-218ENST00000556256 COL27A1Q8IZC6 1860 aaPredicted RBP1.48□□□□□ -2.17
SCFD1-218ENST00000556256 DOCK8Q8NF50 2099 aa1.48□□□□□ -2.17
SCFD1-218ENST00000556256 IGHV3OR16-8A0A075B7F1 116 aa1.48□□□□□ -2.17
SCFD1-218ENST00000556256 LINC01619G3V211 115 aa1.48□□□□□ -2.17
SCFD1-218ENST00000556256 TRDMT1O14717 391 aaKnown RBP1.48□□□□□ -2.17
SCFD1-218ENST00000556256 PSPHP1O15172 72 aa1.48□□□□□ -2.17
SCFD1-218ENST00000556256 MPDU1O75352 247 aa1.48□□□□□ -2.17
SCFD1-218ENST00000556256 TGM6O95932 706 aa1.48□□□□□ -2.17
SCFD1-218ENST00000556256 LHBP01229 141 aa1.48□□□□□ -2.17
SCFD1-218ENST00000556256 IGLV3-19P01714 112 aa1.48□□□□□ -2.17
SCFD1-218ENST00000556256 KLK1P06870 262 aa1.48□□□□□ -2.17
SCFD1-218ENST00000556256 SRMP19623 302 aa1.48□□□□□ -2.17
SCFD1-218ENST00000556256 CXCR1P25024 350 aa1.48□□□□□ -2.17
SCFD1-218ENST00000556256 PCK1P35558 622 aa1.48□□□□□ -2.17
SCFD1-218ENST00000556256 CFHR2P36980 270 aa1.48□□□□□ -2.17
SCFD1-218ENST00000556256 AP1S2P56377 157 aa1.48□□□□□ -2.17
SCFD1-218ENST00000556256 IFITM3Q01628 133 aa1.48□□□□□ -2.17
SCFD1-218ENST00000556256 YIF1BQ5BJH7 314 aa1.48□□□□□ -2.17
SCFD1-218ENST00000556256 TPRG1LQ5T0D9 272 aa1.48□□□□□ -2.17
SCFD1-218ENST00000556256 PRR9Q5T870 116 aa1.48□□□□□ -2.17
SCFD1-218ENST00000556256 TMEM236Q5W0B7 351 aa1.48□□□□□ -2.17
SCFD1-218ENST00000556256 STEAP4Q687X5 459 aa1.48□□□□□ -2.17
SCFD1-218ENST00000556256 OR2T5Q6IEZ7 315 aa1.48□□□□□ -2.17
SCFD1-218ENST00000556256 ULK3Q6PHR2 472 aa1.48□□□□□ -2.17
SCFD1-218ENST00000556256 ANGPTL8Q6UXH0 198 aa1.48□□□□□ -2.17
SCFD1-218ENST00000556256 TMPRSS11AQ6ZMR5 421 aa1.48□□□□□ -2.17
SCFD1-218ENST00000556256 RAB43Q86YS6 212 aa1.48□□□□□ -2.17
SCFD1-218ENST00000556256 DAW1Q8N136 415 aa1.48□□□□□ -2.17
SCFD1-218ENST00000556256 KIF2BQ8N4N8 673 aa1.48□□□□□ -2.17
SCFD1-218ENST00000556256 TMEM105Q8N8V8 129 aa1.48□□□□□ -2.17
SCFD1-218ENST00000556256 OR2T29Q8NH02 315 aa1.48□□□□□ -2.17
SCFD1-218ENST00000556256 KLF14Q8TD94 323 aaPredicted RBP1.48□□□□□ -2.17
SCFD1-218ENST00000556256 ASZ1Q8WWH4 475 aa1.48□□□□□ -2.17
SCFD1-218ENST00000556256 TOP1MTQ969P6 601 aa1.48□□□□□ -2.17
SCFD1-218ENST00000556256 CPNE4Q96A23 557 aaPredicted RBP1.48□□□□□ -2.17
SCFD1-218ENST00000556256 ISOC2Q96AB3 205 aa1.48□□□□□ -2.17
SCFD1-218ENST00000556256 CERS2Q96G23 380 aa1.48□□□□□ -2.17
SCFD1-218ENST00000556256 IP6K3Q96PC2 410 aa1.48□□□□□ -2.17
SCFD1-218ENST00000556256 SCGB3A2Q96PL1 93 aa1.48□□□□□ -2.17
SCFD1-218ENST00000556256 KCNS3Q9BQ31 491 aa1.48□□□□□ -2.17
SCFD1-218ENST00000556256 IL22Q9GZX6 179 aa1.48□□□□□ -2.17
SCFD1-218ENST00000556256 NAA50Q9GZZ1 169 aaKnown RBP1.48□□□□□ -2.17
SCFD1-218ENST00000556256 BLZF1Q9H2G9 400 aa1.48□□□□□ -2.17
SCFD1-218ENST00000556256 CLSTN2Q9H4D0 955 aa1.48□□□□□ -2.17
SCFD1-218ENST00000556256 REEP1Q9H902 201 aa1.48□□□□□ -2.17
SCFD1-218ENST00000556256 CYP3A43Q9HB55 503 aa1.48□□□□□ -2.17
SCFD1-218ENST00000556256 ZC4H2Q9NQZ6 224 aa1.48□□□□□ -2.17
SCFD1-218ENST00000556256 SIGLEC7Q9Y286 467 aa1.48□□□□□ -2.17
SCFD1-218ENST00000556256 NUP214P35658 2090 aaPredicted RBP1.47□□□□□ -2.17
SCFD1-218ENST00000556256 BTNL10A8MVZ5 291 aa1.47□□□□□ -2.17
SCFD1-218ENST00000556256 C16orf90A8MZG2 172 aa1.47□□□□□ -2.17
SCFD1-218ENST00000556256 H3BN98 237 aa1.47□□□□□ -2.17
SCFD1-218ENST00000556256 CHMP2AO43633 222 aa1.47□□□□□ -2.17
SCFD1-218ENST00000556256 PSMB5P28074 263 aa1.47□□□□□ -2.17
SCFD1-218ENST00000556256 CCT6AP40227 531 aaKnown RBP1.47□□□□□ -2.17
SCFD1-218ENST00000556256 CCNG1P51959 295 aa1.47□□□□□ -2.17
SCFD1-218ENST00000556256 CMC4P56277 68 aaPredicted RBP1.47□□□□□ -2.17
SCFD1-218ENST00000556256 ELF3P78545 371 aaPredicted RBP1.47□□□□□ -2.17
SCFD1-218ENST00000556256 LCN2P80188 198 aa1.47□□□□□ -2.17
SCFD1-218ENST00000556256 RPL18AQ02543 176 aaKnown RBP1.47□□□□□ -2.17
SCFD1-218ENST00000556256 DOC2AQ14183 400 aa1.47□□□□□ -2.17
SCFD1-218ENST00000556256 TSC22D1Q15714 1073 aa1.47□□□□□ -2.17
SCFD1-218ENST00000556256 HADHQ16836 314 aaKnown RBP1.47□□□□□ -2.17
SCFD1-218ENST00000556256 C6orf99Q4VX62 202 aa1.47□□□□□ -2.17
SCFD1-218ENST00000556256 OPN5Q6U736 354 aa1.47□□□□□ -2.17
SCFD1-218ENST00000556256 MDP1Q86V88 176 aa1.47□□□□□ -2.17
SCFD1-218ENST00000556256 LRP11Q86VZ4 500 aa1.47□□□□□ -2.17
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms