RNA–Protein interactions for RNA: ENST00000554604.5

SHMT2-214, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 5

Gene SHMT2, Length 879 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-214ENST00000554604 TRBV5-5A0A0J9YX44 114 aa10.7□□□□□ -0.7
SHMT2-214ENST00000554604 NOTOA8MTQ0 251 aa10.7□□□□□ -0.7
SHMT2-214ENST00000554604 PDCD5O14737 125 aa10.7□□□□□ -0.7
SHMT2-214ENST00000554604 LY6HO94772 140 aa10.7□□□□□ -0.7
SHMT2-214ENST00000554604 HLA-DQA2P01906 255 aa10.7□□□□□ -0.7
SHMT2-214ENST00000554604 APOA1P02647 267 aa10.7□□□□□ -0.7
SHMT2-214ENST00000554604 ERCC1P07992 297 aaPredicted RBP10.7□□□□□ -0.7
SHMT2-214ENST00000554604 IL7P13232 177 aa10.7□□□□□ -0.7
SHMT2-214ENST00000554604 SLC25A16P16260 332 aa10.7□□□□□ -0.7
SHMT2-214ENST00000554604 MAPK3P27361 379 aaPredicted RBP10.7□□□□□ -0.7
SHMT2-214ENST00000554604 APEX1P27695 318 aaKnown RBP10.7□□□□□ -0.7
SHMT2-214ENST00000554604 CCR9P51686 369 aa10.7□□□□□ -0.7
SHMT2-214ENST00000554604 GALK2Q01415 458 aa10.7□□□□□ -0.7
SHMT2-214ENST00000554604 EFNB3Q15768 340 aa10.7□□□□□ -0.7
SHMT2-214ENST00000554604 CARTPTQ16568 116 aa10.7□□□□□ -0.7
SHMT2-214ENST00000554604 PCK2Q16822 640 aa10.7□□□□□ -0.7
SHMT2-214ENST00000554604 CNIH2Q6PI25 160 aa10.7□□□□□ -0.7
SHMT2-214ENST00000554604 KCTD18Q6PI47 426 aaPredicted RBP10.7□□□□□ -0.7
SHMT2-214ENST00000554604 LRRC28Q86X40 367 aaPredicted RBP10.7□□□□□ -0.7
SHMT2-214ENST00000554604 SKA3Q8IX90 412 aa10.7□□□□□ -0.7
SHMT2-214ENST00000554604 NOXO1Q8NFA2 376 aa10.7□□□□□ -0.7
SHMT2-214ENST00000554604 OR10H5Q8NGA6 315 aa10.7□□□□□ -0.7
SHMT2-214ENST00000554604 OR2G2Q8NGZ5 317 aa10.7□□□□□ -0.7
SHMT2-214ENST00000554604 OR5AK2Q8NH90 309 aa10.7□□□□□ -0.7
SHMT2-214ENST00000554604 SORCS2Q96PQ0 1159 aa10.7□□□□□ -0.7
SHMT2-214ENST00000554604 OR14A2Q96R54 314 aa10.7□□□□□ -0.7
SHMT2-214ENST00000554604 RAB1BQ9H0U4 201 aa10.7□□□□□ -0.7
SHMT2-214ENST00000554604 PLK3Q9H4B4 646 aa10.7□□□□□ -0.7
SHMT2-214ENST00000554604 RNF121Q9H920 327 aa10.7□□□□□ -0.7
SHMT2-214ENST00000554604 NOX3Q9HBY0 568 aa10.7□□□□□ -0.7
SHMT2-214ENST00000554604 TMEM38BQ9NVV0 291 aa10.7□□□□□ -0.7
SHMT2-214ENST00000554604 KCNG2Q9UJ96 466 aa10.7□□□□□ -0.7
SHMT2-214ENST00000554604 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP10.7□□□□□ -0.72e-7■■■■■ 34
SHMT2-214ENST00000554604 TMEM212A6NML5 194 aa10.69□□□□□ -0.7
SHMT2-214ENST00000554604 OR4C45A6NMZ5 311 aa10.69□□□□□ -0.7
SHMT2-214ENST00000554604 PSMD9O00233 223 aa10.69□□□□□ -0.7
SHMT2-214ENST00000554604 RPP14O95059 124 aaKnown RBP10.69□□□□□ -0.7
SHMT2-214ENST00000554604 ZFPL1O95159 310 aa10.69□□□□□ -0.7
SHMT2-214ENST00000554604 GPANK1O95872 356 aa10.69□□□□□ -0.7
SHMT2-214ENST00000554604 HLA-DQB1P01920 261 aa10.69□□□□□ -0.7
SHMT2-214ENST00000554604 PATE4P0C8F1 98 aa10.69□□□□□ -0.7
SHMT2-214ENST00000554604 PSKH1P11801 424 aa10.69□□□□□ -0.7
SHMT2-214ENST00000554604 ZNF14P17017 642 aaPredicted RBP10.69□□□□□ -0.7
SHMT2-214ENST00000554604 PPOXP50336 477 aa10.69□□□□□ -0.7
SHMT2-214ENST00000554604 PDLIM4P50479 330 aa10.69□□□□□ -0.7
SHMT2-214ENST00000554604 SCN1BQ07699 218 aa10.69□□□□□ -0.7
SHMT2-214ENST00000554604 BAK1Q16611 211 aa10.69□□□□□ -0.7
SHMT2-214ENST00000554604 Q499Y3 187 aa10.69□□□□□ -0.7
SHMT2-214ENST00000554604 CEP78Q5JTW2 689 aa10.69□□□□□ -0.7
SHMT2-214ENST00000554604 TMEM53Q6P2H8 277 aa10.69□□□□□ -0.7
SHMT2-214ENST00000554604 DPPA2Q7Z7J5 298 aa10.69□□□□□ -0.7
SHMT2-214ENST00000554604 ZNF679Q8IYX0 411 aa10.69□□□□□ -0.7
SHMT2-214ENST00000554604 SLC26A10Q8NG04 563 aa10.69□□□□□ -0.7
SHMT2-214ENST00000554604 C10orf105Q8TEF2 133 aa10.69□□□□□ -0.7
SHMT2-214ENST00000554604 RGP1Q92546 391 aaPredicted RBP10.69□□□□□ -0.7
SHMT2-214ENST00000554604 NSMAFQ92636 917 aa10.69□□□□□ -0.7
SHMT2-214ENST00000554604 MCHR2Q969V1 340 aa10.69□□□□□ -0.7
SHMT2-214ENST00000554604 CMTM3Q96MX0 182 aa10.69□□□□□ -0.7
SHMT2-214ENST00000554604 DERL3Q96Q80 235 aa10.69□□□□□ -0.7
SHMT2-214ENST00000554604 MRPL13Q9BYD1 178 aaKnown RBP10.69□□□□□ -0.7
SHMT2-214ENST00000554604 COMMD4Q9H0A8 199 aa10.69□□□□□ -0.7
SHMT2-214ENST00000554604 DYNLRB1Q9NP97 96 aa10.69□□□□□ -0.7
SHMT2-214ENST00000554604 CYSLTR2Q9NS75 346 aa10.69□□□□□ -0.7
SHMT2-214ENST00000554604 C14orf119Q9NWQ9 140 aa10.69□□□□□ -0.7
SHMT2-214ENST00000554604 SLCO1C1Q9NYB5 712 aa10.69□□□□□ -0.7
SHMT2-214ENST00000554604 ZNF224Q9NZL3 707 aa10.69□□□□□ -0.7
SHMT2-214ENST00000554604 FRRS1LQ9P0K9 344 aa10.69□□□□□ -0.7
SHMT2-214ENST00000554604 TBC1D24Q9ULP9 559 aa10.69□□□□□ -0.7
SHMT2-214ENST00000554604 COA3Q9Y2R0 106 aaPredicted RBP10.69□□□□□ -0.7
SHMT2-214ENST00000554604 PIN1P1O15428 100 aa10.68□□□□□ -0.7
SHMT2-214ENST00000554604 ZNF254O75437 659 aa10.68□□□□□ -0.7
SHMT2-214ENST00000554604 SERPINA5P05154 406 aa10.68□□□□□ -0.7
SHMT2-214ENST00000554604 SPARCP09486 303 aa10.68□□□□□ -0.7
SHMT2-214ENST00000554604 NR2C1P13056 603 aa10.68□□□□□ -0.7
SHMT2-214ENST00000554604 ZNF823P16415 610 aa10.68□□□□□ -0.7
SHMT2-214ENST00000554604 ELK1P19419 428 aa10.68□□□□□ -0.7
SHMT2-214ENST00000554604 SRMP19623 302 aa10.68□□□□□ -0.7
SHMT2-214ENST00000554604 AZGP1P25311 298 aaKnown RBP10.68□□□□□ -0.7
SHMT2-214ENST00000554604 OR10A3P58181 314 aa10.68□□□□□ -0.7
SHMT2-214ENST00000554604 RPS23P62266 143 aaKnown RBP10.68□□□□□ -0.7
SHMT2-214ENST00000554604 KRTAP1-1Q07627 177 aa10.68□□□□□ -0.7
SHMT2-214ENST00000554604 ASAH1Q13510 395 aa10.68□□□□□ -0.7
SHMT2-214ENST00000554604 EIF2B1Q14232 305 aaKnown RBP10.68□□□□□ -0.7
SHMT2-214ENST00000554604 HIST3H3Q16695 136 aa10.68□□□□□ -0.7
SHMT2-214ENST00000554604 MEP1BQ16820 701 aa10.68□□□□□ -0.7
SHMT2-214ENST00000554604 SLC36A2Q495M3 483 aa10.68□□□□□ -0.7
SHMT2-214ENST00000554604 PYDC2Q56P42 97 aa10.68□□□□□ -0.7
SHMT2-214ENST00000554604 THEM4Q5T1C6 240 aa10.68□□□□□ -0.7
SHMT2-214ENST00000554604 GDPD3Q7L5L3 318 aa10.68□□□□□ -0.7
SHMT2-214ENST00000554604 SLC16A14Q7RTX9 510 aa10.68□□□□□ -0.7
SHMT2-214ENST00000554604 C4orf45Q96LM5 186 aa10.68□□□□□ -0.7
SHMT2-214ENST00000554604 ZNF75AQ96N20 296 aa10.68□□□□□ -0.7
SHMT2-214ENST00000554604 RBP7Q96R05 134 aa10.68□□□□□ -0.7
SHMT2-214ENST00000554604 AMELYQ99218 206 aa10.68□□□□□ -0.7
SHMT2-214ENST00000554604 PIMREGQ9BSJ6 248 aa10.68□□□□□ -0.7
SHMT2-214ENST00000554604 MRI1Q9BV20 369 aa10.68□□□□□ -0.7
SHMT2-214ENST00000554604 ABHD6Q9BV23 337 aa10.68□□□□□ -0.7
SHMT2-214ENST00000554604 NOX4Q9NPH5 578 aa10.68□□□□□ -0.7
SHMT2-214ENST00000554604 YAE1D1Q9NRH1 226 aa10.68□□□□□ -0.7
SHMT2-214ENST00000554604 ATRQ13535 2644 aa10.68□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms