RNA–Protein interactions for RNA: ENST00000553950.5

SHMT2-210, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2

Gene SHMT2, Length 584 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-210ENST00000553950 RNF224P0DH78 156 aa12.45□□□□□ -0.42
SHMT2-210ENST00000553950 FAHP16930 419 aa12.45□□□□□ -0.42
SHMT2-210ENST00000553950 RAB3AP20336 220 aa12.45□□□□□ -0.42
SHMT2-210ENST00000553950 PSMD7P51665 324 aa12.45□□□□□ -0.42
SHMT2-210ENST00000553950 ZNF672Q499Z4 452 aaPredicted RBP12.45□□□□□ -0.42
SHMT2-210ENST00000553950 FGGYQ96C11 551 aa12.45□□□□□ -0.42
SHMT2-210ENST00000553950 CMBLQ96DG6 245 aa12.45□□□□□ -0.42
SHMT2-210ENST00000553950 PAPOLGQ9BWT3 736 aaKnown RBP12.45□□□□□ -0.42
SHMT2-210ENST00000553950 POFUT1Q9H488 388 aa12.45□□□□□ -0.42
SHMT2-210ENST00000553950 ZCCHC4Q9H5U6 513 aa12.45□□□□□ -0.42
SHMT2-210ENST00000553950 SNTG1Q9NSN8 517 aa12.45□□□□□ -0.42
SHMT2-210ENST00000553950 CEPT1Q9Y6K0 416 aa12.45□□□□□ -0.42
SHMT2-210ENST00000553950 C5orf63A6NC05 138 aa12.44□□□□□ -0.42
SHMT2-210ENST00000553950 TMEM127O75204 238 aa12.44□□□□□ -0.42
SHMT2-210ENST00000553950 IL1AP01583 271 aa12.44□□□□□ -0.42
SHMT2-210ENST00000553950 PRKACBP22694 351 aa12.44□□□□□ -0.42
SHMT2-210ENST00000553950 ACKR3P25106 362 aa12.44□□□□□ -0.42
SHMT2-210ENST00000553950 APOBEC3AP31941 199 aaPredicted RBP12.44□□□□□ -0.42
SHMT2-210ENST00000553950 ERVS71-1P61550 626 aa12.44□□□□□ -0.42
SHMT2-210ENST00000553950 PSG7Q13046 419 aa12.44□□□□□ -0.42
SHMT2-210ENST00000553950 HLXQ14774 488 aaPredicted RBP12.44□□□□□ -0.42
SHMT2-210ENST00000553950 EFNB3Q15768 340 aa12.44□□□□□ -0.42
SHMT2-210ENST00000553950 CTF1Q16619 201 aa12.44□□□□□ -0.42
SHMT2-210ENST00000553950 TMEM42Q69YG0 159 aa12.44□□□□□ -0.42
SHMT2-210ENST00000553950 VHLLQ6RSH7 139 aa12.44□□□□□ -0.42
SHMT2-210ENST00000553950 CROCCP3Q8IVE0 287 aa12.44□□□□□ -0.42
SHMT2-210ENST00000553950 ZDHHC23Q8IYP9 409 aa12.44□□□□□ -0.42
SHMT2-210ENST00000553950 SPERTQ8NA61 448 aa12.44□□□□□ -0.42
SHMT2-210ENST00000553950 OR8G5Q8NG78 346 aa12.44□□□□□ -0.42
SHMT2-210ENST00000553950 RPL3LQ92901 407 aaKnown RBP12.44□□□□□ -0.42
SHMT2-210ENST00000553950 FBXW5Q969U6 566 aa12.44□□□□□ -0.42
SHMT2-210ENST00000553950 DGCR14Q96DF8 476 aaKnown RBP12.44□□□□□ -0.42
SHMT2-210ENST00000553950 HIST1H2AAQ96QV6 131 aa12.44□□□□□ -0.42
SHMT2-210ENST00000553950 DHRS9Q9BPW9 319 aa12.44□□□□□ -0.42
SHMT2-210ENST00000553950 CENPOQ9BU64 300 aa12.44□□□□□ -0.42
SHMT2-210ENST00000553950 PLK3Q9H4B4 646 aa12.44□□□□□ -0.42
SHMT2-210ENST00000553950 SLC7A11Q9UPY5 501 aa12.44□□□□□ -0.42
SHMT2-210ENST00000553950 A6NHS1 94 aa12.43□□□□□ -0.42
SHMT2-210ENST00000553950 H3BMQ9 156 aa12.43□□□□□ -0.42
SHMT2-210ENST00000553950 H3BSH0 61 aa12.43□□□□□ -0.42
SHMT2-210ENST00000553950 SIAH2O43255 324 aa12.43□□□□□ -0.42
SHMT2-210ENST00000553950 NRASP01111 189 aa12.43□□□□□ -0.42
SHMT2-210ENST00000553950 ANOS1P23352 680 aa12.43□□□□□ -0.42
SHMT2-210ENST00000553950 LOXP28300 417 aaPredicted RBP12.43□□□□□ -0.42
SHMT2-210ENST00000553950 MPV17P39210 176 aa12.43□□□□□ -0.42
SHMT2-210ENST00000553950 FABP6P51161 128 aa12.43□□□□□ -0.42
SHMT2-210ENST00000553950 ADIPOQQ15848 244 aa12.43□□□□□ -0.42
SHMT2-210ENST00000553950 NKPD1Q17RQ9 610 aa12.43□□□□□ -0.42
SHMT2-210ENST00000553950 PLCXD3Q63HM9 321 aa12.43□□□□□ -0.42
SHMT2-210ENST00000553950 OR2T2Q6IF00 324 aa12.43□□□□□ -0.42
SHMT2-210ENST00000553950 CDH26Q8IXH8 852 aa12.43□□□□□ -0.42
SHMT2-210ENST00000553950 FBXL14Q8N1E6 418 aa12.43□□□□□ -0.42
SHMT2-210ENST00000553950 DNAAF1Q8NEP3 725 aa12.43□□□□□ -0.42
SHMT2-210ENST00000553950 UBASH3BQ8TF42 649 aa12.43□□□□□ -0.42
SHMT2-210ENST00000553950 FOXRED1Q96CU9 486 aaPredicted RBP12.43□□□□□ -0.42
SHMT2-210ENST00000553950 ADAT3Q96EY9 351 aaPredicted RBP12.43□□□□□ -0.42
SHMT2-210ENST00000553950 TRMT61AQ96FX7 289 aaKnown RBP12.43□□□□□ -0.42
SHMT2-210ENST00000553950 DIRC2Q96SL1 478 aa12.43□□□□□ -0.42
SHMT2-210ENST00000553950 ADAT1Q9BUB4 502 aaKnown RBP12.43□□□□□ -0.42
SHMT2-210ENST00000553950 TMEM138Q9NPI0 162 aa12.43□□□□□ -0.42
SHMT2-210ENST00000553950 NKIRAS2Q9NYR9 191 aa12.43□□□□□ -0.42
SHMT2-210ENST00000553950 TAS2R4Q9NYW5 299 aa12.43□□□□□ -0.42
SHMT2-210ENST00000553950 DUSP13Q9UII6 198 aa12.43□□□□□ -0.42
SHMT2-210ENST00000553950 RAI1Q7Z5J4 1906 aaPredicted RBP12.43□□□□□ -0.42
SHMT2-210ENST00000553950 OR5B21A6NL26 309 aa12.42□□□□□ -0.42
SHMT2-210ENST00000553950 B9A039 149 aa12.42□□□□□ -0.42
SHMT2-210ENST00000553950 HS3ST1O14792 307 aa12.42□□□□□ -0.42
SHMT2-210ENST00000553950 GMDSO60547 372 aa12.42□□□□□ -0.42
SHMT2-210ENST00000553950 OR4A8P0C604 315 aa12.42□□□□□ -0.42
SHMT2-210ENST00000553950 BMP4P12644 408 aa12.42□□□□□ -0.42
SHMT2-210ENST00000553950 IGFBP3P17936 291 aaPredicted RBP12.42□□□□□ -0.42
SHMT2-210ENST00000553950 SRMP19623 302 aa12.42□□□□□ -0.42
SHMT2-210ENST00000553950 BDKRB2P30411 391 aa12.42□□□□□ -0.42
SHMT2-210ENST00000553950 SERPINF1P36955 418 aa12.42□□□□□ -0.42
SHMT2-210ENST00000553950 SERPINB10P48595 397 aa12.42□□□□□ -0.42
SHMT2-210ENST00000553950 CAPZA1P52907 286 aa12.42□□□□□ -0.42
SHMT2-210ENST00000553950 VBP1P61758 197 aa12.42□□□□□ -0.42
SHMT2-210ENST00000553950 NCS1P62166 190 aa12.42□□□□□ -0.42
SHMT2-210ENST00000553950 LSM3P62310 102 aaKnown RBP12.42□□□□□ -0.42
SHMT2-210ENST00000553950 SNRPD2P62316 118 aaKnown RBP12.42□□□□□ -0.42
SHMT2-210ENST00000553950 PRDX4Q13162 271 aa12.42□□□□□ -0.42
SHMT2-210ENST00000553950 GLT8D1Q68CQ7 371 aa12.42□□□□□ -0.42
SHMT2-210ENST00000553950 ZNF529Q6P280 563 aa12.42□□□□□ -0.42
SHMT2-210ENST00000553950 LHFPL2Q6ZUX7 228 aa12.42□□□□□ -0.42
SHMT2-210ENST00000553950 PNLDC1Q8NA58 520 aaKnown RBP12.42□□□□□ -0.42
SHMT2-210ENST00000553950 BHLHE23Q8NDY6 225 aa12.42□□□□□ -0.42
SHMT2-210ENST00000553950 OR1M1Q8NGA1 313 aa12.42□□□□□ -0.42
SHMT2-210ENST00000553950 OR13C9Q8NGT0 318 aa12.42□□□□□ -0.42
SHMT2-210ENST00000553950 OR13G1Q8NGZ3 307 aa12.42□□□□□ -0.42
SHMT2-210ENST00000553950 OR8S1Q8NH09 359 aa12.42□□□□□ -0.42
SHMT2-210ENST00000553950 C12orf43Q96C57 262 aaKnown RBP12.42□□□□□ -0.42
SHMT2-210ENST00000553950 MICU1Q9BPX6 476 aa12.42□□□□□ -0.42
SHMT2-210ENST00000553950 SLC30A2Q9BRI3 323 aa12.42□□□□□ -0.42
SHMT2-210ENST00000553950 RTL8AQ9BWD3 113 aa12.42□□□□□ -0.42
SHMT2-210ENST00000553950 NAA50Q9GZZ1 169 aaKnown RBP12.42□□□□□ -0.42
SHMT2-210ENST00000553950 TMEM100Q9NV29 134 aa12.42□□□□□ -0.42
SHMT2-210ENST00000553950 CISD1Q9NZ45 108 aaKnown RBP12.42□□□□□ -0.42
SHMT2-210ENST00000553950 LRRK2Q5S007 2527 aa12.42□□□□□ -0.42
SHMT2-210ENST00000553950 TMEM210A6NLX4 147 aa12.41□□□□□ -0.42
SHMT2-210ENST00000553950 E7EQL1 145 aa12.41□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms