RNA–Protein interactions for RNA: ENST00000553491.5

ATXN3-220, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 857 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-220ENST00000553491 PTHP01270 115 aa4.01□□□□□ -1.77
ATXN3-220ENST00000553491 SEMG1P04279 462 aa4.01□□□□□ -1.77
ATXN3-220ENST00000553491 OR4A8P0C604 315 aa4.01□□□□□ -1.77
ATXN3-220ENST00000553491 CECR9P0C854 216 aa4.01□□□□□ -1.77
ATXN3-220ENST00000553491 NR2C1P13056 603 aa4.01□□□□□ -1.77
ATXN3-220ENST00000553491 ZNF823P16415 610 aa4.01□□□□□ -1.77
ATXN3-220ENST00000553491 ZNF32P17041 273 aa4.01□□□□□ -1.77
ATXN3-220ENST00000553491 NPR2P20594 1047 aa4.01□□□□□ -1.77
ATXN3-220ENST00000553491 LAP3P28838 519 aa4.01□□□□□ -1.77
ATXN3-220ENST00000553491 PYCR1P32322 319 aa4.01□□□□□ -1.77
ATXN3-220ENST00000553491 CDKN2AP42771 156 aaKnown RBP4.01□□□□□ -1.77
ATXN3-220ENST00000553491 GDI2P50395 445 aaKnown RBP4.01□□□□□ -1.77
ATXN3-220ENST00000553491 RPS4XP62701 263 aaKnown RBP4.01□□□□□ -1.77
ATXN3-220ENST00000553491 MRPS34P82930 218 aaKnown RBP4.01□□□□□ -1.77
ATXN3-220ENST00000553491 NAAAQ02083 359 aa4.01□□□□□ -1.77
ATXN3-220ENST00000553491 TSPAN31Q12999 210 aa4.01□□□□□ -1.77
ATXN3-220ENST00000553491 SNTB2Q13425 540 aaKnown RBP4.01□□□□□ -1.77
ATXN3-220ENST00000553491 KRR1Q13601 381 aaKnown RBP4.01□□□□□ -1.77
ATXN3-220ENST00000553491 TAF13Q15543 124 aa4.01□□□□□ -1.77
ATXN3-220ENST00000553491 TBC1D28Q2M2D7 210 aa4.01□□□□□ -1.77
ATXN3-220ENST00000553491 PABPC1L2AQ5JQF8 200 aa4.01□□□□□ -1.77
ATXN3-220ENST00000553491 ARMC4Q5T2S8 1044 aa4.01□□□□□ -1.77
ATXN3-220ENST00000553491 GPR139Q6DWJ6 353 aa4.01□□□□□ -1.77
ATXN3-220ENST00000553491 SLC25A47Q6Q0C1 308 aa4.01□□□□□ -1.77
ATXN3-220ENST00000553491 UGT2A3Q6UWM9 527 aa4.01□□□□□ -1.77
ATXN3-220ENST00000553491 PAMR1Q6UXH9 720 aa4.01□□□□□ -1.77
ATXN3-220ENST00000553491 NHLRC1Q6VVB1 395 aa4.01□□□□□ -1.77
ATXN3-220ENST00000553491 TMEM179BQ7Z7N9 219 aa4.01□□□□□ -1.77
ATXN3-220ENST00000553491 AQP12AQ8IXF9 295 aa4.01□□□□□ -1.77
ATXN3-220ENST00000553491 MUC15Q8N387 334 aa4.01□□□□□ -1.77
ATXN3-220ENST00000553491 ZNF611Q8N823 705 aa4.01□□□□□ -1.77
ATXN3-220ENST00000553491 PRR26Q8N8Z3 221 aa4.01□□□□□ -1.77
ATXN3-220ENST00000553491 CYB561A3Q8NBI2 242 aa4.01□□□□□ -1.77
ATXN3-220ENST00000553491 SLC30A7Q8NEW0 376 aa4.01□□□□□ -1.77
ATXN3-220ENST00000553491 OR10G2Q8NGC3 310 aa4.01□□□□□ -1.77
ATXN3-220ENST00000553491 OR51L1Q8NGJ5 315 aa4.01□□□□□ -1.77
ATXN3-220ENST00000553491 OR1J2Q8NGS2 313 aa4.01□□□□□ -1.77
ATXN3-220ENST00000553491 OR2AJ1Q8NGZ0 328 aa4.01□□□□□ -1.77
ATXN3-220ENST00000553491 AKR7LQ8NHP1 331 aa4.01□□□□□ -1.77
ATXN3-220ENST00000553491 TEX47Q8TBZ9 253 aa4.01□□□□□ -1.77
ATXN3-220ENST00000553491 MAGEE2Q8TD90 523 aaPredicted RBP4.01□□□□□ -1.77
ATXN3-220ENST00000553491 LIPHQ8WWY8 451 aa4.01□□□□□ -1.77
ATXN3-220ENST00000553491 POP5Q969H6 163 aaKnown RBP4.01□□□□□ -1.77
ATXN3-220ENST00000553491 GRAMD2BQ96HH9 432 aa4.01□□□□□ -1.77
ATXN3-220ENST00000553491 PLEKHA8Q96JA3 519 aa4.01□□□□□ -1.77
ATXN3-220ENST00000553491 TSSK2Q96PF2 358 aa4.01□□□□□ -1.77
ATXN3-220ENST00000553491 NMNAT3Q96T66 252 aa4.01□□□□□ -1.77
ATXN3-220ENST00000553491 FEVQ99581 238 aa4.01□□□□□ -1.77
ATXN3-220ENST00000553491 GPA33Q99795 319 aa4.01□□□□□ -1.77
ATXN3-220ENST00000553491 DHRS9Q9BPW9 319 aa4.01□□□□□ -1.77
ATXN3-220ENST00000553491 ALG12Q9BV10 488 aa4.01□□□□□ -1.77
ATXN3-220ENST00000553491 TEX12Q9BXU0 123 aa4.01□□□□□ -1.77
ATXN3-220ENST00000553491 RBM38Q9H0Z9 239 aaKnown RBP4.01□□□□□ -1.77
ATXN3-220ENST00000553491 SYT4Q9H2B2 425 aa4.01□□□□□ -1.77
ATXN3-220ENST00000553491 HRH4Q9H3N8 390 aa4.01□□□□□ -1.77
ATXN3-220ENST00000553491 SIAEQ9HAT2 523 aa4.01□□□□□ -1.77
ATXN3-220ENST00000553491 SEBOXQ9HB31 216 aaPredicted RBP4.01□□□□□ -1.77
ATXN3-220ENST00000553491 RPRD1BQ9NQG5 326 aaKnown RBP4.01□□□□□ -1.77
ATXN3-220ENST00000553491 VNN3Q9NY84 501 aa4.01□□□□□ -1.77
ATXN3-220ENST00000553491 DNAJB9Q9UBS3 223 aa4.01□□□□□ -1.77
ATXN3-220ENST00000553491 SLC7A8Q9UHI5 535 aa4.01□□□□□ -1.77
ATXN3-220ENST00000553491 SIGLEC7Q9Y286 467 aa4.01□□□□□ -1.77
ATXN3-220ENST00000553491 PAM16Q9Y3D7 125 aa4.01□□□□□ -1.77
ATXN3-220ENST00000553491 GRIP1Q9Y3R0 1128 aa4.01□□□□□ -1.77
ATXN3-220ENST00000553491 AP4S1Q9Y587 144 aa4.01□□□□□ -1.77
ATXN3-220ENST00000553491 TIMM10BQ9Y5J6 103 aa4.01□□□□□ -1.77
ATXN3-220ENST00000553491 NOTCH2Q04721 2471 aa4□□□□□ -1.77
ATXN3-220ENST00000553491 ARPC4-TTLL3A0A0A6YYG9 625 aa4□□□□□ -1.77
ATXN3-220ENST00000553491 IGKV1D-43A0A0B4J1Z2 117 aa4□□□□□ -1.77
ATXN3-220ENST00000553491 IGHV2OR16-5A0A0B4J2B6 119 aa4□□□□□ -1.77
ATXN3-220ENST00000553491 A0A1W2PPW3 197 aa4□□□□□ -1.77
ATXN3-220ENST00000553491 PRSS37A4D1T9 235 aa4□□□□□ -1.77
ATXN3-220ENST00000553491 C5orf49A4QMS7 147 aa4□□□□□ -1.77
ATXN3-220ENST00000553491 TVP23AA6NH52 213 aa4□□□□□ -1.77
ATXN3-220ENST00000553491 RIIAD1A6NNX1 92 aa4□□□□□ -1.77
ATXN3-220ENST00000553491 C12orf71A8MTZ7 269 aa4□□□□□ -1.77
ATXN3-220ENST00000553491 G3V2T6 193 aa4□□□□□ -1.77
ATXN3-220ENST00000553491 OGG1O15527 345 aa4□□□□□ -1.77
ATXN3-220ENST00000553491 MITFO75030 526 aaPredicted RBP4□□□□□ -1.77
ATXN3-220ENST00000553491 NDUFS7O75251 213 aa4□□□□□ -1.77
ATXN3-220ENST00000553491 IGF2P01344 180 aa4□□□□□ -1.77
ATXN3-220ENST00000553491 IFNGP01579 166 aa4□□□□□ -1.77
ATXN3-220ENST00000553491 SERPINA5P05154 406 aa4□□□□□ -1.77
ATXN3-220ENST00000553491 GYPBP06028 91 aa4□□□□□ -1.77
ATXN3-220ENST00000553491 SOD3P08294 240 aa4□□□□□ -1.77
ATXN3-220ENST00000553491 ADRA2AP08913 450 aa4□□□□□ -1.77
ATXN3-220ENST00000553491 CD99P14209 185 aa4□□□□□ -1.77
ATXN3-220ENST00000553491 HIST1H1CP16403 213 aaKnown RBP4□□□□□ -1.77
ATXN3-220ENST00000553491 ZNF23P17027 643 aa4□□□□□ -1.77
ATXN3-220ENST00000553491 ZNF26P17031 533 aaPredicted RBP4□□□□□ -1.77
ATXN3-220ENST00000553491 GSTM3P21266 225 aa4□□□□□ -1.77
ATXN3-220ENST00000553491 MSR1P21757 451 aa4□□□□□ -1.77
ATXN3-220ENST00000553491 PAX7P23759 505 aa4□□□□□ -1.77
ATXN3-220ENST00000553491 FASP25445 335 aa4□□□□□ -1.77
ATXN3-220ENST00000553491 STOMP27105 288 aa4□□□□□ -1.77
ATXN3-220ENST00000553491 LOXP28300 417 aaPredicted RBP4□□□□□ -1.77
ATXN3-220ENST00000553491 CRABP1P29762 137 aa4□□□□□ -1.77
ATXN3-220ENST00000553491 CALCRP30988 508 aa4□□□□□ -1.77
ATXN3-220ENST00000553491 HOXD3P31249 432 aaPredicted RBP4□□□□□ -1.77
ATXN3-220ENST00000553491 GSSP48637 474 aa4□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms