RNA–Protein interactions for RNA: ENST00000548919.5

RAPGEF3-218, Transcript of Rap guanine nucleotide exchange factor 3, humanhuman

TSL 2 BASIC

Gene RAPGEF3, Length 2,776 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF3-218ENST00000548919 FBLN5Q9UBX5 448 aa12.48□□□□□ -0.41
RAPGEF3-218ENST00000548919 SRPK3Q9UPE1 567 aa12.48□□□□□ -0.41
RAPGEF3-218ENST00000548919 A0A1W2PNR3 127 aa12.48□□□□□ -0.41
RAPGEF3-218ENST00000548919 VSTM2BA6NLU5 285 aa12.48□□□□□ -0.41
RAPGEF3-218ENST00000548919 METTL12A8MUP2 240 aa12.48□□□□□ -0.41
RAPGEF3-218ENST00000548919 SNAPINO95295 136 aa12.48□□□□□ -0.41
RAPGEF3-218ENST00000548919 SERPINA5P05154 406 aa12.48□□□□□ -0.41
RAPGEF3-218ENST00000548919 CRYBA1P05813 215 aa12.48□□□□□ -0.41
RAPGEF3-218ENST00000548919 SFTPBP07988 381 aa12.48□□□□□ -0.41
RAPGEF3-218ENST00000548919 GSTP1P09211 210 aaKnown RBP12.48□□□□□ -0.41
RAPGEF3-218ENST00000548919 KLK2P20151 261 aa12.48□□□□□ -0.41
RAPGEF3-218ENST00000548919 NME2P22392 152 aa12.48□□□□□ -0.41
RAPGEF3-218ENST00000548919 APOBEC1P41238 236 aaKnown RBP12.48□□□□□ -0.41
RAPGEF3-218ENST00000548919 C17orf67Q0P5P2 114 aa12.48□□□□□ -0.41
RAPGEF3-218ENST00000548919 AKIRIN2Q53H80 203 aa12.48□□□□□ -0.41
RAPGEF3-218ENST00000548919 VAX1Q5SQQ9 334 aa12.48□□□□□ -0.41
RAPGEF3-218ENST00000548919 FAM57BQ71RH2 274 aa12.48□□□□□ -0.41
RAPGEF3-218ENST00000548919 ARRDC1Q8N5I2 433 aa12.48□□□□□ -0.41
RAPGEF3-218ENST00000548919 PNLDC1Q8NA58 520 aaKnown RBP12.48□□□□□ -0.41
RAPGEF3-218ENST00000548919 OR2AJ1Q8NGZ0 328 aa12.48□□□□□ -0.41
RAPGEF3-218ENST00000548919 KCNG3Q8TAE7 436 aa12.48□□□□□ -0.41
RAPGEF3-218ENST00000548919 NUBPLQ8TB37 319 aa12.48□□□□□ -0.41
RAPGEF3-218ENST00000548919 RXFP4Q8TDU9 374 aa12.48□□□□□ -0.41
RAPGEF3-218ENST00000548919 FBXO9Q9UK97 447 aaPredicted RBP12.48□□□□□ -0.41
RAPGEF3-218ENST00000548919 IGKV1-9A0A0C4DH69 117 aa12.47□□□□□ -0.41
RAPGEF3-218ENST00000548919 ZNF814B7Z6K7 855 aa12.47□□□□□ -0.41
RAPGEF3-218ENST00000548919 ZNF878C9JN71 531 aa12.47□□□□□ -0.41
RAPGEF3-218ENST00000548919 FOSL2P15408 326 aa12.47□□□□□ -0.41
RAPGEF3-218ENST00000548919 RFC3P40938 356 aa12.47□□□□□ -0.41
RAPGEF3-218ENST00000548919 HOXA1P49639 335 aaPredicted RBP12.47□□□□□ -0.41
RAPGEF3-218ENST00000548919 PDZK1IP1Q13113 114 aa12.47□□□□□ -0.41
RAPGEF3-218ENST00000548919 RSPO4Q2I0M5 234 aaPredicted RBP12.47□□□□□ -0.41
RAPGEF3-218ENST00000548919 C14orf28Q4W4Y0 310 aa12.47□□□□□ -0.41
RAPGEF3-218ENST00000548919 APCDD1LQ8NCL9 501 aa12.47□□□□□ -0.41
RAPGEF3-218ENST00000548919 ZNF775Q96BV0 537 aaPredicted RBP12.47□□□□□ -0.41
RAPGEF3-218ENST00000548919 LIN37Q96GY3 246 aaPredicted RBP12.47□□□□□ -0.41
RAPGEF3-218ENST00000548919 NRIP2Q9BQI9 281 aa12.47□□□□□ -0.41
RAPGEF3-218ENST00000548919 SLC5A7Q9GZV3 580 aa12.47□□□□□ -0.41
RAPGEF3-218ENST00000548919 SLC26A1Q9H2B4 701 aa12.47□□□□□ -0.41
RAPGEF3-218ENST00000548919 SLC22A11Q9NSA0 550 aa12.47□□□□□ -0.41
RAPGEF3-218ENST00000548919 EHFQ9NZC4 300 aa12.47□□□□□ -0.41
RAPGEF3-218ENST00000548919 EXPH5Q8NEV8 1989 aa12.47□□□□□ -0.41
RAPGEF3-218ENST00000548919 A0A1B0GX78 115 aa12.47□□□□□ -0.41
RAPGEF3-218ENST00000548919 MFNGO00587 321 aa12.47□□□□□ -0.41
RAPGEF3-218ENST00000548919 RAMP1O60894 148 aa12.47□□□□□ -0.41
RAPGEF3-218ENST00000548919 CSTBP04080 98 aaKnown RBP12.47□□□□□ -0.41
RAPGEF3-218ENST00000548919 OR3A2P47893 321 aa12.47□□□□□ -0.41
RAPGEF3-218ENST00000548919 SNU13P55769 128 aaKnown RBP12.47□□□□□ -0.41
RAPGEF3-218ENST00000548919 CSNK2A1P68400 391 aaPredicted RBP12.47□□□□□ -0.41
RAPGEF3-218ENST00000548919 RBM39Q14498 530 aaKnown RBP12.47□□□□□ -0.41
RAPGEF3-218ENST00000548919 ETV3LQ6ZN32 361 aa12.47□□□□□ -0.41
RAPGEF3-218ENST00000548919 C17orf82Q86X59 251 aaPredicted RBP12.47□□□□□ -0.41
RAPGEF3-218ENST00000548919 CSNK2A3Q8NEV1 391 aa12.47□□□□□ -0.41
RAPGEF3-218ENST00000548919 OR51T1Q8NGJ9 327 aa12.47□□□□□ -0.41
RAPGEF3-218ENST00000548919 CDC6Q99741 560 aa12.47□□□□□ -0.41
RAPGEF3-218ENST00000548919 NUDT16L1Q9BRJ7 211 aaKnown RBP12.47□□□□□ -0.41
RAPGEF3-218ENST00000548919 SEC11CQ9BY50 192 aa12.47□□□□□ -0.41
RAPGEF3-218ENST00000548919 CHRNA10Q9GZZ6 450 aa12.47□□□□□ -0.41
RAPGEF3-218ENST00000548919 RCC2Q9P258 522 aaKnown RBP12.47□□□□□ -0.41
RAPGEF3-218ENST00000548919 ANAPC10Q9UM13 185 aa12.47□□□□□ -0.41
RAPGEF3-218ENST00000548919 NCOA6Q14686 2063 aaPredicted RBP12.47□□□□□ -0.41
RAPGEF3-218ENST00000548919 ASCC3Q8N3C0 2202 aaKnown RBP12.47□□□□□ -0.41
RAPGEF3-218ENST00000548919 IGHV1OR15-9A0A0B4J2B8 117 aa12.47□□□□□ -0.41
RAPGEF3-218ENST00000548919 MEX3AA1L020 520 aaKnown RBP12.47□□□□□ -0.41
RAPGEF3-218ENST00000548919 PMS2P1A4D2B8 440 aa12.47□□□□□ -0.41
RAPGEF3-218ENST00000548919 C9JQL5 133 aa12.47□□□□□ -0.41
RAPGEF3-218ENST00000548919 FBXO24O75426 580 aa12.47□□□□□ -0.41
RAPGEF3-218ENST00000548919 MED6O75586 246 aa12.47□□□□□ -0.41
RAPGEF3-218ENST00000548919 FPR2P25090 351 aa12.47□□□□□ -0.41
RAPGEF3-218ENST00000548919 OR2A2Q6IF42 318 aa12.47□□□□□ -0.41
RAPGEF3-218ENST00000548919 ADAMTS17Q8TE56 1095 aa12.47□□□□□ -0.41
RAPGEF3-218ENST00000548919 AQP10Q96PS8 301 aa12.47□□□□□ -0.41
RAPGEF3-218ENST00000548919 PARP12Q9H0J9 701 aaKnown RBP12.47□□□□□ -0.41
RAPGEF3-218ENST00000548919 ZFP57Q9NU63 452 aa12.47□□□□□ -0.41
RAPGEF3-218ENST00000548919 ALKBH4Q9NXW9 302 aa12.47□□□□□ -0.41
RAPGEF3-218ENST00000548919 KLRF1Q9NZS2 232 aa12.47□□□□□ -0.41
RAPGEF3-218ENST00000548919 KLHL13Q9P2N7 655 aa12.47□□□□□ -0.41
RAPGEF3-218ENST00000548919 B3GALT5Q9Y2C3 310 aa12.47□□□□□ -0.41
RAPGEF3-218ENST00000548919 RPH3AQ9Y2J0 694 aaPredicted RBP12.47□□□□□ -0.41
RAPGEF3-218ENST00000548919 ADAMTS9Q9P2N4 1935 aa12.46□□□□□ -0.41
RAPGEF3-218ENST00000548919 IGHV1OR21-1A0A087WYE8 117 aa12.46□□□□□ -0.41
RAPGEF3-218ENST00000548919 A0A1W2PR77 199 aa12.46□□□□□ -0.41
RAPGEF3-218ENST00000548919 SFTA3P0C7M3 94 aa12.46□□□□□ -0.41
RAPGEF3-218ENST00000548919 PGA4P0DJD7 388 aa12.46□□□□□ -0.41
RAPGEF3-218ENST00000548919 PGA3P0DJD8 388 aa12.46□□□□□ -0.41
RAPGEF3-218ENST00000548919 RPS2P15880 293 aaKnown RBP12.46□□□□□ -0.41
RAPGEF3-218ENST00000548919 AKR1C3P42330 323 aa12.46□□□□□ -0.41
RAPGEF3-218ENST00000548919 P2RY4P51582 365 aa12.46□□□□□ -0.41
RAPGEF3-218ENST00000548919 GPR85P60893 370 aa12.46□□□□□ -0.41
RAPGEF3-218ENST00000548919 GABREP78334 506 aa12.46□□□□□ -0.41
RAPGEF3-218ENST00000548919 CTAG1AP78358 180 aa12.46□□□□□ -0.41
RAPGEF3-218ENST00000548919 THEM4Q5T1C6 240 aa12.46□□□□□ -0.41
RAPGEF3-218ENST00000548919 PEG10Q86TG7 708 aaKnown RBP12.46□□□□□ -0.41
RAPGEF3-218ENST00000548919 UEVLDQ8IX04 471 aa12.46□□□□□ -0.41
RAPGEF3-218ENST00000548919 POC1AQ8NBT0 407 aa12.46□□□□□ -0.41
RAPGEF3-218ENST00000548919 C2orf50Q96LR7 162 aa12.46□□□□□ -0.41
RAPGEF3-218ENST00000548919 OCSTAMPQ9BR26 566 aa12.46□□□□□ -0.41
RAPGEF3-218ENST00000548919 TAF9BQ9HBM6 251 aa12.46□□□□□ -0.41
RAPGEF3-218ENST00000548919 CEACAM18A8MTB9 384 aa12.46□□□□□ -0.42
RAPGEF3-218ENST00000548919 LYL1P12980 280 aa12.46□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 59.2 ms