RNA–Protein interactions for RNA: ENST00000548570.1

APP-217, Transcript of amyloid beta precursor protein, humanhuman

TSL 2

Gene APP, Length 361 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APP-217ENST00000548570 TRAV8-7A0A075B6U6 113 aa4.25□□□□□ -1.73
APP-217ENST00000548570 A0A087WXM4 84 aa4.25□□□□□ -1.73
APP-217ENST00000548570 TRBV5-7A0A0A0MS05 114 aa4.25□□□□□ -1.73
APP-217ENST00000548570 TRBV2A0A0J9YWF9 115 aa4.25□□□□□ -1.73
APP-217ENST00000548570 PNMA8CA0A1B0GUJ8 204 aa4.25□□□□□ -1.73
APP-217ENST00000548570 LOC390937A0A1W2PQ73 354 aa4.25□□□□□ -1.73
APP-217ENST00000548570 MAGEA13PA6NCF6 341 aa4.25□□□□□ -1.73
APP-217ENST00000548570 IQCF6A8MYZ5 107 aa4.25□□□□□ -1.73
APP-217ENST00000548570 MYL12BO14950 172 aa4.25□□□□□ -1.73
APP-217ENST00000548570 TBX1O43435 398 aa4.25□□□□□ -1.73
APP-217ENST00000548570 NDUFS7O75251 213 aa4.25□□□□□ -1.73
APP-217ENST00000548570 GPX5O75715 221 aa4.25□□□□□ -1.73
APP-217ENST00000548570 NCR1O76036 304 aa4.25□□□□□ -1.73
APP-217ENST00000548570 GOSR1O95249 250 aa4.25□□□□□ -1.73
APP-217ENST00000548570 ATE1O95260 518 aa4.25□□□□□ -1.73
APP-217ENST00000548570 IGHV1-46P01743 117 aa4.25□□□□□ -1.73
APP-217ENST00000548570 HLA-DPB1P04440 258 aa4.25□□□□□ -1.73
APP-217ENST00000548570 CD1AP06126 327 aa4.25□□□□□ -1.73
APP-217ENST00000548570 RPSAP08865 295 aaKnown RBP4.25□□□□□ -1.73
APP-217ENST00000548570 TACSTD2P09758 323 aa4.25□□□□□ -1.73
APP-217ENST00000548570 NAT2P11245 290 aa4.25□□□□□ -1.73
APP-217ENST00000548570 RAC2P15153 192 aa4.25□□□□□ -1.73
APP-217ENST00000548570 ATP6V1B1P15313 513 aa4.25□□□□□ -1.73
APP-217ENST00000548570 FAHP16930 419 aa4.25□□□□□ -1.73
APP-217ENST00000548570 CELP19835 753 aa4.25□□□□□ -1.73
APP-217ENST00000548570 ACHEP22303 614 aa4.25□□□□□ -1.73
APP-217ENST00000548570 APOBEC3AP31941 199 aaPredicted RBP4.25□□□□□ -1.73
APP-217ENST00000548570 THBS2P35442 1172 aa4.25□□□□□ -1.73
APP-217ENST00000548570 CRYBB2P43320 205 aa4.25□□□□□ -1.73
APP-217ENST00000548570 GBX2P52951 348 aaPredicted RBP4.25□□□□□ -1.73
APP-217ENST00000548570 SLC3A1Q07837 685 aa4.25□□□□□ -1.73
APP-217ENST00000548570 MAB21L1Q13394 359 aa4.25□□□□□ -1.73
APP-217ENST00000548570 MED22Q15528 200 aa4.25□□□□□ -1.73
APP-217ENST00000548570 UBE2V2Q15819 145 aa4.25□□□□□ -1.73
APP-217ENST00000548570 NEDD8Q15843 81 aa4.25□□□□□ -1.73
APP-217ENST00000548570 TSTQ16762 297 aaKnown RBP4.25□□□□□ -1.73
APP-217ENST00000548570 TIGD6Q17RP2 521 aa4.25□□□□□ -1.73
APP-217ENST00000548570 ZNF829Q3KNS6 432 aaPredicted RBP4.25□□□□□ -1.73
APP-217ENST00000548570 ARMCX4Q5H9R4 360 aa4.25□□□□□ -1.73
APP-217ENST00000548570 LIPKQ5VXJ0 399 aa4.25□□□□□ -1.73
APP-217ENST00000548570 RGS7BPQ6MZT1 257 aaPredicted RBP4.25□□□□□ -1.73
APP-217ENST00000548570 ZNF544Q6NX49 715 aa4.25□□□□□ -1.73
APP-217ENST00000548570 CD200R1LQ6Q8B3 271 aa4.25□□□□□ -1.73
APP-217ENST00000548570 ARL9Q6T311 187 aa4.25□□□□□ -1.73
APP-217ENST00000548570 TMPRSS11AQ6ZMR5 421 aa4.25□□□□□ -1.73
APP-217ENST00000548570 PGAP1Q75T13 922 aa4.25□□□□□ -1.73
APP-217ENST00000548570 ZNF367Q7RTV3 350 aa4.25□□□□□ -1.73
APP-217ENST00000548570 RP1L1Q8IWN7 2480 aaPredicted RBP4.25□□□□□ -1.73
APP-217ENST00000548570 C11orf53Q8IXP5 236 aa4.25□□□□□ -1.73
APP-217ENST00000548570 OR8G5Q8NG78 346 aa4.25□□□□□ -1.73
APP-217ENST00000548570 OR52H1Q8NGJ2 320 aa4.25□□□□□ -1.73
APP-217ENST00000548570 SYNPRQ8TBG9 265 aa4.25□□□□□ -1.73
APP-217ENST00000548570 TMEM203Q969S6 136 aa4.25□□□□□ -1.73
APP-217ENST00000548570 YIPF6Q96EC8 236 aa4.25□□□□□ -1.73
APP-217ENST00000548570 GFI1Q99684 422 aa4.25□□□□□ -1.73
APP-217ENST00000548570 NKX3-1Q99801 234 aaPredicted RBP4.25□□□□□ -1.73
APP-217ENST00000548570 KCNS3Q9BQ31 491 aa4.25□□□□□ -1.73
APP-217ENST00000548570 MND1Q9BWT6 205 aa4.25□□□□□ -1.73
APP-217ENST00000548570 NAA50Q9GZZ1 169 aaKnown RBP4.25□□□□□ -1.73
APP-217ENST00000548570 RNF167Q9H6Y7 350 aa4.25□□□□□ -1.73
APP-217ENST00000548570 MOB1AQ9H8S9 216 aa4.25□□□□□ -1.73
APP-217ENST00000548570 MSL2Q9HCI7 577 aa4.25□□□□□ -1.73
APP-217ENST00000548570 NGBQ9NPG2 151 aa4.25□□□□□ -1.73
APP-217ENST00000548570 TRIM36Q9NQ86 728 aa4.25□□□□□ -1.73
APP-217ENST00000548570 EIF3KQ9UBQ5 218 aaKnown RBP4.25□□□□□ -1.73
APP-217ENST00000548570 PFDN2Q9UHV9 154 aa4.25□□□□□ -1.73
APP-217ENST00000548570 DUSP13Q9UII6 198 aa4.25□□□□□ -1.73
APP-217ENST00000548570 GPR160Q9UJ42 338 aa4.25□□□□□ -1.73
APP-217ENST00000548570 ZNF281Q9Y2X9 895 aa4.25□□□□□ -1.73
APP-217ENST00000548570 PDZD2O15018 2839 aa4.25□□□□□ -1.73
APP-217ENST00000548570 TACC2O95359 2948 aa4.25□□□□□ -1.73
APP-217ENST00000548570 FREM1Q5H8C1 2179 aa4.24□□□□□ -1.73
APP-217ENST00000548570 ASH1LQ9NR48 2969 aaKnown RBP4.24□□□□□ -1.73
APP-217ENST00000548570 GTF3C1Q12789 2109 aa4.24□□□□□ -1.73
APP-217ENST00000548570 ESPL1Q14674 2120 aa4.24□□□□□ -1.73
APP-217ENST00000548570 ZGRF1Q86YA3 2104 aa4.24□□□□□ -1.73
APP-217ENST00000548570 ARHGAP21Q5T5U3 1957 aa4.24□□□□□ -1.73
APP-217ENST00000548570 IGKV1-27A0A075B6S5 117 aa4.24□□□□□ -1.73
APP-217ENST00000548570 IGHV3-64DA0A0J9YX35 117 aa4.24□□□□□ -1.73
APP-217ENST00000548570 LOC100289279A0A1B0GTE1 492 aa4.24□□□□□ -1.73
APP-217ENST00000548570 A0A1W2PPK0 400 aa4.24□□□□□ -1.73
APP-217ENST00000548570 TMEM212A6NML5 194 aa4.24□□□□□ -1.73
APP-217ENST00000548570 B9A039 149 aa4.24□□□□□ -1.73
APP-217ENST00000548570 H3BSA7 217 aa4.24□□□□□ -1.73
APP-217ENST00000548570 XRCC2O43543 280 aa4.24□□□□□ -1.73
APP-217ENST00000548570 SYT7O43581 403 aa4.24□□□□□ -1.73
APP-217ENST00000548570 GMDSO60547 372 aa4.24□□□□□ -1.73
APP-217ENST00000548570 DHRS3O75911 302 aa4.24□□□□□ -1.73
APP-217ENST00000548570 LY6HO94772 140 aa4.24□□□□□ -1.73
APP-217ENST00000548570 PTBP3O95758 552 aaKnown RBP4.24□□□□□ -1.73
APP-217ENST00000548570 CST4P01036 141 aa4.24□□□□□ -1.73
APP-217ENST00000548570 APOC1P02654 83 aa4.24□□□□□ -1.73
APP-217ENST00000548570 HPXP02790 462 aa4.24□□□□□ -1.73
APP-217ENST00000548570 ADH4P08319 380 aa4.24□□□□□ -1.73
APP-217ENST00000548570 HSMCR30P0CW71 290 aa4.24□□□□□ -1.73
APP-217ENST00000548570 CD37P11049 281 aa4.24□□□□□ -1.73
APP-217ENST00000548570 IGFBP3P17936 291 aaPredicted RBP4.24□□□□□ -1.73
APP-217ENST00000548570 ADRA2CP18825 462 aa4.24□□□□□ -1.73
APP-217ENST00000548570 TUBG1P23258 451 aa4.24□□□□□ -1.73
APP-217ENST00000548570 CA6P23280 308 aa4.24□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms