RNA–Protein interactions for RNA: ENST00000543658.5

DDB1-223, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 4

Gene DDB1, Length 571 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-223ENST00000543658 TECTBQ96PL2 329 aa10.19□□□□□ -0.78
DDB1-223ENST00000543658 PSMG3-AS1Q96PY0 264 aa10.19□□□□□ -0.78
DDB1-223ENST00000543658 CHCHD6Q9BRQ6 235 aa10.19□□□□□ -0.78
DDB1-223ENST00000543658 SOX7Q9BT81 388 aa10.19□□□□□ -0.78
DDB1-223ENST00000543658 FUNDC2Q9BWH2 189 aa10.19□□□□□ -0.78
DDB1-223ENST00000543658 TCF7L1Q9HCS4 588 aa10.19□□□□□ -0.78
DDB1-223ENST00000543658 ZNF275Q9NSD4 429 aaPredicted RBP10.19□□□□□ -0.78
DDB1-223ENST00000543658 TMEM100Q9NV29 134 aa10.19□□□□□ -0.78
DDB1-223ENST00000543658 NKIRAS2Q9NYR9 191 aa10.19□□□□□ -0.78
DDB1-223ENST00000543658 MRPL15Q9P015 296 aaKnown RBP10.19□□□□□ -0.78
DDB1-223ENST00000543658 SF3B6Q9Y3B4 125 aaKnown RBP10.19□□□□□ -0.78
DDB1-223ENST00000543658 BAHCC1Q9P281 2608 aa10.19□□□□□ -0.78
DDB1-223ENST00000543658 IGLV3-9A0A075B6K5 115 aa10.18□□□□□ -0.78
DDB1-223ENST00000543658 TRDV1A0A1B0GX56 115 aa10.18□□□□□ -0.78
DDB1-223ENST00000543658 ANKRD61A6NGH8 418 aa10.18□□□□□ -0.78
DDB1-223ENST00000543658 CTAG2O75638 210 aa10.18□□□□□ -0.78
DDB1-223ENST00000543658 NRASP01111 189 aa10.18□□□□□ -0.78
DDB1-223ENST00000543658 RAF1P04049 648 aa10.18□□□□□ -0.78
DDB1-223ENST00000543658 ERCC1P07992 297 aaPredicted RBP10.18□□□□□ -0.78
DDB1-223ENST00000543658 TNFSF4P23510 183 aa10.18□□□□□ -0.78
DDB1-223ENST00000543658 ACKR3P25106 362 aa10.18□□□□□ -0.78
DDB1-223ENST00000543658 COL8A1P27658 744 aa10.18□□□□□ -0.78
DDB1-223ENST00000543658 SSTR2P30874 369 aa10.18□□□□□ -0.78
DDB1-223ENST00000543658 MZT1Q08AG7 82 aa10.18□□□□□ -0.78
DDB1-223ENST00000543658 PRDX4Q13162 271 aa10.18□□□□□ -0.78
DDB1-223ENST00000543658 OR8G1Q15617 311 aa10.18□□□□□ -0.78
DDB1-223ENST00000543658 C22orf42Q6IC83 251 aa10.18□□□□□ -0.78
DDB1-223ENST00000543658 GDPGP1Q6ZNW5 385 aa10.18□□□□□ -0.78
DDB1-223ENST00000543658 MOB3CQ70IA8 216 aa10.18□□□□□ -0.78
DDB1-223ENST00000543658 LRP11Q86VZ4 500 aa10.18□□□□□ -0.78
DDB1-223ENST00000543658 CLVS1Q8IUQ0 354 aaPredicted RBP10.18□□□□□ -0.78
DDB1-223ENST00000543658 ZDHHC23Q8IYP9 409 aa10.18□□□□□ -0.78
DDB1-223ENST00000543658 PIGTQ969N2 578 aa10.18□□□□□ -0.78
DDB1-223ENST00000543658 C14orf79Q96F83 325 aa10.18□□□□□ -0.78
DDB1-223ENST00000543658 CPNE2Q96FN4 548 aaPredicted RBP10.18□□□□□ -0.78
DDB1-223ENST00000543658 DERL3Q96Q80 235 aa10.18□□□□□ -0.78
DDB1-223ENST00000543658 ADAT1Q9BUB4 502 aaKnown RBP10.18□□□□□ -0.78
DDB1-223ENST00000543658 CHST5Q9GZS9 411 aa10.18□□□□□ -0.78
DDB1-223ENST00000543658 OR51E2Q9H255 320 aa10.18□□□□□ -0.78
DDB1-223ENST00000543658 ZCCHC4Q9H5U6 513 aa10.18□□□□□ -0.78
DDB1-223ENST00000543658 NOX4Q9NPH5 578 aa10.18□□□□□ -0.78
DDB1-223ENST00000543658 SLC7A11Q9UPY5 501 aa10.18□□□□□ -0.78
DDB1-223ENST00000543658 MPC1Q9Y5U8 109 aa10.18□□□□□ -0.78
DDB1-223ENST00000543658 A0A1W2PPK0 400 aa10.17□□□□□ -0.78
DDB1-223ENST00000543658 A6NIN4 97 aa10.17□□□□□ -0.78
DDB1-223ENST00000543658 ZNF850A8MQ14 1090 aa10.17□□□□□ -0.78
DDB1-223ENST00000543658 TPD52L2O43399 206 aaKnown RBP10.17□□□□□ -0.78
DDB1-223ENST00000543658 LMX1BO60663 402 aa10.17□□□□□ -0.78
DDB1-223ENST00000543658 CST4P01036 141 aa10.17□□□□□ -0.78
DDB1-223ENST00000543658 HCKP08631 526 aa10.17□□□□□ -0.78
DDB1-223ENST00000543658 FSTP19883 344 aa10.17□□□□□ -0.78
DDB1-223ENST00000543658 RAB3AP20336 220 aa10.17□□□□□ -0.78
DDB1-223ENST00000543658 CA6P23280 308 aa10.17□□□□□ -0.78
DDB1-223ENST00000543658 CALRP27797 417 aaKnown RBP10.17□□□□□ -0.78
DDB1-223ENST00000543658 MAGEB1P43366 347 aa10.17□□□□□ -0.78
DDB1-223ENST00000543658 ZNF81P51508 661 aa10.17□□□□□ -0.78
DDB1-223ENST00000543658 RPS11P62280 158 aaKnown RBP eCLIP10.17□□□□□ -0.78
DDB1-223ENST00000543658 EFNB3Q15768 340 aa10.17□□□□□ -0.78
DDB1-223ENST00000543658 C20orf204Q6ZNR8 217 aa10.17□□□□□ -0.78
DDB1-223ENST00000543658 Q6ZSR3 168 aa10.17□□□□□ -0.78
DDB1-223ENST00000543658 ANKRD13BQ86YJ7 626 aa10.17□□□□□ -0.78
DDB1-223ENST00000543658 PARP16Q8N5Y8 322 aa10.17□□□□□ -0.78
DDB1-223ENST00000543658 ZNF611Q8N823 705 aa10.17□□□□□ -0.78
DDB1-223ENST00000543658 OR13C9Q8NGT0 318 aa10.17□□□□□ -0.78
DDB1-223ENST00000543658 OR13G1Q8NGZ3 307 aa10.17□□□□□ -0.78
DDB1-223ENST00000543658 LILRB1Q8NHL6 650 aaPredicted RBP10.17□□□□□ -0.78
DDB1-223ENST00000543658 MARVELD3Q96A59 401 aa10.17□□□□□ -0.78
DDB1-223ENST00000543658 ADAT3Q96EY9 351 aaPredicted RBP10.17□□□□□ -0.78
DDB1-223ENST00000543658 KCTD7Q96MP8 289 aa10.17□□□□□ -0.78
DDB1-223ENST00000543658 DIRC2Q96SL1 478 aa10.17□□□□□ -0.78
DDB1-223ENST00000543658 MICU1Q9BPX6 476 aa10.17□□□□□ -0.78
DDB1-223ENST00000543658 RTL8AQ9BWD3 113 aa10.17□□□□□ -0.78
DDB1-223ENST00000543658 GPR173Q9NS66 373 aa10.17□□□□□ -0.78
DDB1-223ENST00000543658 CBLN4Q9NTU7 201 aa10.17□□□□□ -0.78
DDB1-223ENST00000543658 TXNL4BQ9NX01 149 aaKnown RBP10.17□□□□□ -0.78
DDB1-223ENST00000543658 TAS2R4Q9NYW5 299 aa10.17□□□□□ -0.78
DDB1-223ENST00000543658 MYEF2Q9P2K5 600 aaKnown RBP10.17□□□□□ -0.78
DDB1-223ENST00000543658 RHBDD3Q9Y3P4 386 aa10.17□□□□□ -0.78
DDB1-223ENST00000543658 PMF1-BGLAPU3KQ54 211 aa10.17□□□□□ -0.78
DDB1-223ENST00000543658 ABCA4P78363 2273 aa10.17□□□□□ -0.78
DDB1-223ENST00000543658 CHD3Q12873 2000 aaKnown RBP10.16□□□□□ -0.78
DDB1-223ENST00000543658 TRBV5-7A0A0A0MS05 114 aa10.16□□□□□ -0.78
DDB1-223ENST00000543658 FAM221AA4D161 298 aa10.16□□□□□ -0.78
DDB1-223ENST00000543658 PDCD5O14737 125 aa10.16□□□□□ -0.78
DDB1-223ENST00000543658 SPRY3O43610 288 aa10.16□□□□□ -0.78
DDB1-223ENST00000543658 SULT1B1O43704 296 aa10.16□□□□□ -0.78
DDB1-223ENST00000543658 GMDSO60547 372 aa10.16□□□□□ -0.78
DDB1-223ENST00000543658 SC5DO75845 299 aa10.16□□□□□ -0.78
DDB1-223ENST00000543658 UCHL1P09936 223 aa10.16□□□□□ -0.78
DDB1-223ENST00000543658 PRKACBP22694 351 aa10.16□□□□□ -0.78
DDB1-223ENST00000543658 FGF9P31371 208 aaPredicted RBP10.16□□□□□ -0.78
DDB1-223ENST00000543658 CRYBB2P43320 205 aa10.16□□□□□ -0.78
DDB1-223ENST00000543658 ALDH3B1P43353 468 aa10.16□□□□□ -0.78
DDB1-223ENST00000543658 LSM3P62310 102 aaKnown RBP10.16□□□□□ -0.78
DDB1-223ENST00000543658 TNK1Q13470 666 aa10.16□□□□□ -0.78
DDB1-223ENST00000543658 INSL4Q14641 139 aa10.16□□□□□ -0.78
DDB1-223ENST00000543658 MSMPQ1L6U9 139 aa10.16□□□□□ -0.78
DDB1-223ENST00000543658 CEP78Q5JTW2 689 aa10.16□□□□□ -0.78
DDB1-223ENST00000543658 CD200R1LQ6Q8B3 271 aa10.16□□□□□ -0.78
DDB1-223ENST00000543658 UNQ9370/PRO34162Q6UXP9 181 aa10.16□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms