RNA–Protein interactions for RNA: ENST00000540017.6

SNRPA1-203, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 1 (best)

Gene SNRPA1, Length 506 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-203ENST00000540017 OR51F2Q8NH61 342 aa15.34■□□□□ 0.05
SNRPA1-203ENST00000540017 ITPKCQ96DU7 683 aa15.34■□□□□ 0.05
SNRPA1-203ENST00000540017 FAM71F1Q96KD3 344 aaPredicted RBP15.34■□□□□ 0.05
SNRPA1-203ENST00000540017 BEX2Q9BXY8 128 aa15.34■□□□□ 0.05
SNRPA1-203ENST00000540017 FN3KRPQ9HA64 309 aa15.34■□□□□ 0.05
SNRPA1-203ENST00000540017 C1orf123Q9NWV4 160 aa15.34■□□□□ 0.05
SNRPA1-203ENST00000540017 SMPD3Q9NY59 655 aaPredicted RBP15.34■□□□□ 0.05
SNRPA1-203ENST00000540017 ZNF391Q9UJN7 358 aa15.34■□□□□ 0.05
SNRPA1-203ENST00000540017 GTF2A1LQ9UNN4 478 aa15.34■□□□□ 0.05
SNRPA1-203ENST00000540017 SLC22A13Q9Y226 551 aa15.34■□□□□ 0.05
SNRPA1-203ENST00000540017 ARHGAP32A7KAX9 2087 aa15.34■□□□□ 0.05
SNRPA1-203ENST00000540017 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP15.33■□□□□ 0.04
SNRPA1-203ENST00000540017 METTL15A6NJ78 407 aa15.33■□□□□ 0.04
SNRPA1-203ENST00000540017 LRRC30A6NM36 301 aa15.33■□□□□ 0.04
SNRPA1-203ENST00000540017 CEACAM18A8MTB9 384 aa15.33■□□□□ 0.04
SNRPA1-203ENST00000540017 F5H0A9 414 aaPredicted RBP15.33■□□□□ 0.04
SNRPA1-203ENST00000540017 CST4P01036 141 aa15.33■□□□□ 0.04
SNRPA1-203ENST00000540017 PRDX4Q13162 271 aa15.33■□□□□ 0.04
SNRPA1-203ENST00000540017 LIPNQ5VXI9 398 aa15.33■□□□□ 0.04
SNRPA1-203ENST00000540017 ELMOD2Q8IZ81 293 aa15.33■□□□□ 0.04
SNRPA1-203ENST00000540017 KLHL36Q8N4N3 616 aa15.33■□□□□ 0.04
SNRPA1-203ENST00000540017 SPICQ8N5J4 248 aa15.33■□□□□ 0.04
SNRPA1-203ENST00000540017 PLPP7Q8NBV4 271 aa15.33■□□□□ 0.04
SNRPA1-203ENST00000540017 OR11L1Q8NGX0 322 aa15.33■□□□□ 0.04
SNRPA1-203ENST00000540017 APH1BQ8WW43 257 aa15.33■□□□□ 0.04
SNRPA1-203ENST00000540017 PIGCQ92535 297 aa15.33■□□□□ 0.04
SNRPA1-203ENST00000540017 RNF166Q96A37 237 aaPredicted RBP15.33■□□□□ 0.04
SNRPA1-203ENST00000540017 TMEM246Q9BRR3 403 aa15.33■□□□□ 0.04
SNRPA1-203ENST00000540017 C14orf119Q9NWQ9 140 aa15.33■□□□□ 0.04
SNRPA1-203ENST00000540017 RNF7Q9UBF6 113 aa15.33■□□□□ 0.04
SNRPA1-203ENST00000540017 OR52A1Q9UKL2 312 aa15.33■□□□□ 0.04
SNRPA1-203ENST00000540017 PCDHB10Q9UN67 800 aa15.33■□□□□ 0.04
SNRPA1-203ENST00000540017 JMJD1CQ15652 2540 aa15.32■□□□□ 0.04
SNRPA1-203ENST00000540017 PPIAL4EA0A075B759 164 aa15.32■□□□□ 0.04
SNRPA1-203ENST00000540017 A0A1B0GTI1 187 aa15.32■□□□□ 0.04
SNRPA1-203ENST00000540017 KIAA1324LA8MWY0 1029 aaPredicted RBP15.32■□□□□ 0.04
SNRPA1-203ENST00000540017 PPIAL4DF5H284 164 aa15.32■□□□□ 0.04
SNRPA1-203ENST00000540017 KRT8P05787 483 aa15.32■□□□□ 0.04
SNRPA1-203ENST00000540017 PPIAL4FP0DN26 164 aa15.32■□□□□ 0.04
SNRPA1-203ENST00000540017 GNALP38405 381 aa15.32■□□□□ 0.04
SNRPA1-203ENST00000540017 MAP2K3P46734 347 aa15.32■□□□□ 0.04
SNRPA1-203ENST00000540017 ISL1P61371 349 aa15.32■□□□□ 0.04
SNRPA1-203ENST00000540017 CSNK2BP67870 215 aa15.32■□□□□ 0.04
SNRPA1-203ENST00000540017 LCN2P80188 198 aa15.32■□□□□ 0.04
SNRPA1-203ENST00000540017 ZNF91Q05481 1191 aa15.32■□□□□ 0.04
SNRPA1-203ENST00000540017 ZNF154Q13106 437 aa15.32■□□□□ 0.04
SNRPA1-203ENST00000540017 KRTAP21-3Q3LHN1 58 aa15.32■□□□□ 0.04
SNRPA1-203ENST00000540017 ZNF404Q494X3 552 aa15.32■□□□□ 0.04
SNRPA1-203ENST00000540017 TP53I3Q53FA7 332 aa15.32■□□□□ 0.04
SNRPA1-203ENST00000540017 DMRTC1Q5HYR2 192 aa15.32■□□□□ 0.04
SNRPA1-203ENST00000540017 BCL2L15Q5TBC7 163 aa15.32■□□□□ 0.04
SNRPA1-203ENST00000540017 KRT74Q7RTS7 529 aa15.32■□□□□ 0.04
SNRPA1-203ENST00000540017 COMMD2Q86X83 199 aa15.32■□□□□ 0.04
SNRPA1-203ENST00000540017 C1orf87Q8N0U7 546 aa15.32■□□□□ 0.04
SNRPA1-203ENST00000540017 BOLLQ8N9W6 283 aaKnown RBP15.32■□□□□ 0.04
SNRPA1-203ENST00000540017 OR1M1Q8NGA1 313 aa15.32■□□□□ 0.04
SNRPA1-203ENST00000540017 HPSE2Q8WWQ2 592 aa15.32■□□□□ 0.04
SNRPA1-203ENST00000540017 OR5P3Q8WZ94 311 aa15.32■□□□□ 0.04
SNRPA1-203ENST00000540017 RORBQ92753 470 aa15.32■□□□□ 0.04
SNRPA1-203ENST00000540017 LGALS12Q96DT0 336 aa15.32■□□□□ 0.04
SNRPA1-203ENST00000540017 RDH12Q96NR8 316 aa15.32■□□□□ 0.04
SNRPA1-203ENST00000540017 METTL17Q9H7H0 456 aaPredicted RBP15.32■□□□□ 0.04
SNRPA1-203ENST00000540017 AMBNQ9NP70 447 aa15.32■□□□□ 0.04
SNRPA1-203ENST00000540017 LPAR3Q9UBY5 353 aa15.32■□□□□ 0.04
SNRPA1-203ENST00000540017 EXOGQ9Y2C4 368 aaKnown RBP15.32■□□□□ 0.04
SNRPA1-203ENST00000540017 PPIAL4AQ9Y536 164 aa15.32■□□□□ 0.04
SNRPA1-203ENST00000540017 MPC1Q9Y5U8 109 aa15.32■□□□□ 0.04
SNRPA1-203ENST00000540017 TRAV20A0A0B4J274 112 aa15.31■□□□□ 0.04
SNRPA1-203ENST00000540017 A6NLC8 198 aa15.31■□□□□ 0.04
SNRPA1-203ENST00000540017 SULT1C4O75897 302 aa15.31■□□□□ 0.04
SNRPA1-203ENST00000540017 FSTL3O95633 263 aa15.31■□□□□ 0.04
SNRPA1-203ENST00000540017 CLIC3O95833 236 aa15.31■□□□□ 0.04
SNRPA1-203ENST00000540017 WNT2P09544 360 aa15.31■□□□□ 0.04
SNRPA1-203ENST00000540017 FAM157CP0CG43 387 aa15.31■□□□□ 0.04
SNRPA1-203ENST00000540017 DBTP11182 482 aaKnown RBP15.31■□□□□ 0.04
SNRPA1-203ENST00000540017 IRF2P14316 349 aa15.31■□□□□ 0.04
SNRPA1-203ENST00000540017 CD80P33681 288 aa15.31■□□□□ 0.04
SNRPA1-203ENST00000540017 THBS2P35442 1172 aa15.31■□□□□ 0.04
SNRPA1-203ENST00000540017 ELF3P78545 371 aaPredicted RBP15.31■□□□□ 0.04
SNRPA1-203ENST00000540017 LYPD2Q6UXB3 125 aa15.31■□□□□ 0.04
SNRPA1-203ENST00000540017 CATSPERDQ86XM0 798 aa15.31■□□□□ 0.04
SNRPA1-203ENST00000540017 MUC20Q8N307 709 aaPredicted RBP15.31■□□□□ 0.04
SNRPA1-203ENST00000540017 DEFB108BQ8NET1 73 aa15.31■□□□□ 0.04
SNRPA1-203ENST00000540017 MOB1AQ9H8S9 216 aa15.31■□□□□ 0.04
SNRPA1-203ENST00000540017 ACOXLQ9NUZ1 547 aa15.31■□□□□ 0.04
SNRPA1-203ENST00000540017 SNX5Q9Y5X3 404 aa15.31■□□□□ 0.04
SNRPA1-203ENST00000540017 ZNF816-ZNF321PA0A0X1KG74 233 aa15.3■□□□□ 0.04
SNRPA1-203ENST00000540017 C3orf80F5H4A9 247 aa15.3■□□□□ 0.04
SNRPA1-203ENST00000540017 P2RY10O00398 339 aa15.3■□□□□ 0.04
SNRPA1-203ENST00000540017 MPZL2O60487 215 aa15.3■□□□□ 0.04
SNRPA1-203ENST00000540017 WBP4O75554 376 aaKnown RBP15.3■□□□□ 0.04
SNRPA1-203ENST00000540017 AVPP01185 164 aa15.3■□□□□ 0.04
SNRPA1-203ENST00000540017 LHBP01229 141 aa15.3■□□□□ 0.04
SNRPA1-203ENST00000540017 FAHP16930 419 aa15.3■□□□□ 0.04
SNRPA1-203ENST00000540017 EGR1P18146 543 aa15.3■□□□□ 0.04
SNRPA1-203ENST00000540017 PSMB10P40306 273 aa15.3■□□□□ 0.04
SNRPA1-203ENST00000540017 IL5RAQ01344 420 aa15.3■□□□□ 0.04
SNRPA1-203ENST00000540017 MZT1Q08AG7 82 aa15.3■□□□□ 0.04
SNRPA1-203ENST00000540017 SNCBQ16143 134 aa15.3■□□□□ 0.04
SNRPA1-203ENST00000540017 ODF4Q2M2E3 257 aa15.3■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms