RNA–Protein interactions for RNA: ENST00000539584.5

UBE3B-209, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 5

Gene UBE3B, Length 2,006 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-209ENST00000539584 CRTAPO75718 401 aaPredicted RBP11.71□□□□□ -0.53
UBE3B-209ENST00000539584 RPS2P15880 293 aaKnown RBP11.71□□□□□ -0.53
UBE3B-209ENST00000539584 BCKDHBP21953 392 aa11.71□□□□□ -0.53
UBE3B-209ENST00000539584 PDZK1IP1Q13113 114 aa11.71□□□□□ -0.53
UBE3B-209ENST00000539584 SMCO1Q147U7 214 aa11.71□□□□□ -0.53
UBE3B-209ENST00000539584 PEA15Q15121 130 aa11.71□□□□□ -0.53
UBE3B-209ENST00000539584 SLC9A3R2Q15599 337 aa11.71□□□□□ -0.53
UBE3B-209ENST00000539584 SLC25A47Q6Q0C1 308 aa11.71□□□□□ -0.53
UBE3B-209ENST00000539584 SYT13Q7L8C5 426 aa11.71□□□□□ -0.53
UBE3B-209ENST00000539584 TMEM200AQ86VY9 491 aa11.71□□□□□ -0.53
UBE3B-209ENST00000539584 CBLN2Q8IUK8 224 aa11.71□□□□□ -0.53
UBE3B-209ENST00000539584 OR8B12Q8NGG6 310 aa11.71□□□□□ -0.53
UBE3B-209ENST00000539584 OR5L2Q8NGL0 311 aa11.71□□□□□ -0.53
UBE3B-209ENST00000539584 SNIP1Q8TAD8 396 aaKnown RBP11.71□□□□□ -0.53
UBE3B-209ENST00000539584 GPER1Q99527 375 aa11.71□□□□□ -0.53
UBE3B-209ENST00000539584 TM2D1Q9BX74 207 aa11.71□□□□□ -0.53
UBE3B-209ENST00000539584 GPR84Q9NQS5 396 aa11.71□□□□□ -0.53
UBE3B-209ENST00000539584 SMCO4Q9NRQ5 59 aa11.71□□□□□ -0.53
UBE3B-209ENST00000539584 OR5AC2Q9NZP5 309 aa11.71□□□□□ -0.53
UBE3B-209ENST00000539584 MSGN1A6NI15 193 aa11.7□□□□□ -0.54
UBE3B-209ENST00000539584 FOXI3A8MTJ6 420 aaPredicted RBP11.7□□□□□ -0.54
UBE3B-209ENST00000539584 ADAP1O75689 374 aa11.7□□□□□ -0.54
UBE3B-209ENST00000539584 NAT2P11245 290 aa11.7□□□□□ -0.54
UBE3B-209ENST00000539584 OR3A4PP47883 348 aa11.7□□□□□ -0.54
UBE3B-209ENST00000539584 DVL1P1P54792 670 aaPredicted RBP11.7□□□□□ -0.54
UBE3B-209ENST00000539584 ZNF121P58317 390 aaPredicted RBP11.7□□□□□ -0.54
UBE3B-209ENST00000539584 FAM3AP98173 230 aa11.7□□□□□ -0.54
UBE3B-209ENST00000539584 FOXF1Q12946 379 aa11.7□□□□□ -0.54
UBE3B-209ENST00000539584 RAB32Q13637 225 aa11.7□□□□□ -0.54
UBE3B-209ENST00000539584 ANKRD55Q3KP44 614 aa11.7□□□□□ -0.54
UBE3B-209ENST00000539584 FAM76BQ5HYJ3 339 aa11.7□□□□□ -0.54
UBE3B-209ENST00000539584 OPN5Q6U736 354 aa11.7□□□□□ -0.54
UBE3B-209ENST00000539584 SLC16A14Q7RTX9 510 aa11.7□□□□□ -0.54
UBE3B-209ENST00000539584 COMMD2Q86X83 199 aa11.7□□□□□ -0.54
UBE3B-209ENST00000539584 C15orf54Q8N8G6 183 aa11.7□□□□□ -0.54
UBE3B-209ENST00000539584 OR13G1Q8NGZ3 307 aa11.7□□□□□ -0.54
UBE3B-209ENST00000539584 LYPD6BQ8NI32 183 aa11.7□□□□□ -0.54
UBE3B-209ENST00000539584 ARHGAP5-AS1Q96IT6 56 aa11.7□□□□□ -0.54
UBE3B-209ENST00000539584 C12orf57Q99622 126 aa11.7□□□□□ -0.54
UBE3B-209ENST00000539584 CNTNAP3Q9BZ76 1288 aa11.7□□□□□ -0.54
UBE3B-209ENST00000539584 EGLN1Q9GZT9 426 aa11.7□□□□□ -0.54
UBE3B-209ENST00000539584 COA4Q9NYJ1 87 aa11.7□□□□□ -0.54
UBE3B-209ENST00000539584 EDARQ9UNE0 448 aa11.7□□□□□ -0.54
UBE3B-209ENST00000539584 KPTNQ9Y664 436 aa11.7□□□□□ -0.54
UBE3B-209ENST00000539584 ALPK2Q86TB3 2170 aa11.7□□□□□ -0.54
UBE3B-209ENST00000539584 CHD9Q3L8U1 2897 aa11.7□□□□□ -0.54
UBE3B-209ENST00000539584 IGLV3-12A0A075B6K2 115 aa11.7□□□□□ -0.54
UBE3B-209ENST00000539584 IGHV1OR21-1A0A087WYE8 117 aa11.7□□□□□ -0.54
UBE3B-209ENST00000539584 TLX3O43711 291 aaPredicted RBP11.7□□□□□ -0.54
UBE3B-209ENST00000539584 FBXO24O75426 580 aa11.7□□□□□ -0.54
UBE3B-209ENST00000539584 IFNA2P01563 188 aa11.7□□□□□ -0.54
UBE3B-209ENST00000539584 FCGR3AP08637 254 aa11.7□□□□□ -0.54
UBE3B-209ENST00000539584 ZNF17P17021 662 aa11.7□□□□□ -0.54
UBE3B-209ENST00000539584 THBS4P35443 961 aa11.7□□□□□ -0.54
UBE3B-209ENST00000539584 RBMXP38159 391 aaKnown RBP11.7□□□□□ -0.54
UBE3B-209ENST00000539584 P2RY4P51582 365 aa11.7□□□□□ -0.54
UBE3B-209ENST00000539584 AKR1D1P51857 326 aa11.7□□□□□ -0.54
UBE3B-209ENST00000539584 SNU13P55769 128 aaKnown RBP11.7□□□□□ -0.54
UBE3B-209ENST00000539584 RAB5BP61020 215 aa11.7□□□□□ -0.54
UBE3B-209ENST00000539584 LSM6P62312 80 aaKnown RBP11.7□□□□□ -0.54
UBE3B-209ENST00000539584 CSNK2A1P68400 391 aaPredicted RBP11.7□□□□□ -0.54
UBE3B-209ENST00000539584 SRSF3P84103 164 aaKnown RBP11.7□□□□□ -0.54
UBE3B-209ENST00000539584 HIST3H3Q16695 136 aa11.7□□□□□ -0.54
UBE3B-209ENST00000539584 RNF212Q495C1 297 aa11.7□□□□□ -0.54
UBE3B-209ENST00000539584 BTNL8Q6UX41 500 aa11.7□□□□□ -0.54
UBE3B-209ENST00000539584 CSNK2A3Q8NEV1 391 aa11.7□□□□□ -0.54
UBE3B-209ENST00000539584 OR2I1PQ8NGU4 316 aa11.7□□□□□ -0.54
UBE3B-209ENST00000539584 OR14K1Q8NGZ2 314 aa11.7□□□□□ -0.54
UBE3B-209ENST00000539584 SLC25A43Q8WUT9 341 aaPredicted RBP11.7□□□□□ -0.54
UBE3B-209ENST00000539584 PP6455Q8WZ26 134 aa11.7□□□□□ -0.54
UBE3B-209ENST00000539584 OR10C1Q96KK4 312 aa11.7□□□□□ -0.54
UBE3B-209ENST00000539584 NKX2-4Q9H2Z4 354 aa11.7□□□□□ -0.54
UBE3B-209ENST00000539584 HRH4Q9H3N8 390 aa11.7□□□□□ -0.54
UBE3B-209ENST00000539584 PLEKHA2Q9HB19 425 aa11.7□□□□□ -0.54
UBE3B-209ENST00000539584 DECR2Q9NUI1 292 aa11.7□□□□□ -0.54
UBE3B-209ENST00000539584 PPP4R1LQ9P1A2 415 aa11.7□□□□□ -0.54
UBE3B-209ENST00000539584 TUBD1Q9UJT1 453 aa11.7□□□□□ -0.54
UBE3B-209ENST00000539584 THADAQ6YHU6 1953 aa11.69□□□□□ -0.54
UBE3B-209ENST00000539584 A0A0U1RQV5 110 aa11.69□□□□□ -0.54
UBE3B-209ENST00000539584 IFNA21P01568 189 aa11.69□□□□□ -0.54
UBE3B-209ENST00000539584 IGLV3-1P01715 115 aa11.69□□□□□ -0.54
UBE3B-209ENST00000539584 HKR1P10072 659 aa11.69□□□□□ -0.54
UBE3B-209ENST00000539584 MUC1P15941 1255 aaPredicted RBP11.69□□□□□ -0.54
UBE3B-209ENST00000539584 CPT2P23786 658 aa11.69□□□□□ -0.54
UBE3B-209ENST00000539584 PTGFRP43088 359 aa11.69□□□□□ -0.54
UBE3B-209ENST00000539584 NPBWR1P48145 328 aa11.69□□□□□ -0.54
UBE3B-209ENST00000539584 FBXW4P57775 412 aa11.69□□□□□ -0.54
UBE3B-209ENST00000539584 MYBPHQ13203 477 aa11.69□□□□□ -0.54
UBE3B-209ENST00000539584 CHRFAM7AQ494W8 412 aa11.69□□□□□ -0.54
UBE3B-209ENST00000539584 TMEM268Q5VZI3 342 aa11.69□□□□□ -0.54
UBE3B-209ENST00000539584 Q6ZSR3 168 aa11.69□□□□□ -0.54
UBE3B-209ENST00000539584 WDFY1Q8IWB7 410 aa11.69□□□□□ -0.54
UBE3B-209ENST00000539584 APCDD1LQ8NCL9 501 aa11.69□□□□□ -0.54
UBE3B-209ENST00000539584 OR51T1Q8NGJ9 327 aa11.69□□□□□ -0.54
UBE3B-209ENST00000539584 OXGR1Q96P68 337 aa11.69□□□□□ -0.54
UBE3B-209ENST00000539584 EMC6Q9BV81 110 aa11.69□□□□□ -0.54
UBE3B-209ENST00000539584 TUBA4BQ9H853 241 aa11.69□□□□□ -0.54
UBE3B-209ENST00000539584 EHFQ9NZC4 300 aa11.69□□□□□ -0.54
UBE3B-209ENST00000539584 VDAC3Q9Y277 283 aa11.69□□□□□ -0.54
UBE3B-209ENST00000539584 IGHV1OR15-9A0A0B4J2B8 117 aa11.69□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms