RNA–Protein interactions for RNA: ENST00000533667.5

CTNND1-236, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 4,990 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-236ENST00000533667 AUNIPQ9H7T9 357 aa6.32□□□□□ -1.4
CTNND1-236ENST00000533667 PRDM7Q9NQW5 492 aa6.32□□□□□ -1.4
CTNND1-236ENST00000533667 ITGB4P16144 1822 aa6.32□□□□□ -1.4
CTNND1-236ENST00000533667 SCN7AQ01118 1682 aa6.32□□□□□ -1.4
CTNND1-236ENST00000533667 ELOA3CA0A087WX78 387 aaPredicted RBP6.32□□□□□ -1.4
CTNND1-236ENST00000533667 FAM166BA8MTA8 275 aa6.32□□□□□ -1.4
CTNND1-236ENST00000533667 DCTN6O00399 190 aa6.32□□□□□ -1.4
CTNND1-236ENST00000533667 EFSO43281 561 aa6.32□□□□□ -1.4
CTNND1-236ENST00000533667 ZNF207O43670 478 aaKnown RBP6.32□□□□□ -1.4
CTNND1-236ENST00000533667 SSSCA1O60232 199 aa6.32□□□□□ -1.4
CTNND1-236ENST00000533667 ADAM11O75078 769 aa6.32□□□□□ -1.4
CTNND1-236ENST00000533667 CNIH1O95406 144 aa6.32□□□□□ -1.4
CTNND1-236ENST00000533667 MMP7P09237 267 aaPredicted RBP6.32□□□□□ -1.4
CTNND1-236ENST00000533667 ZGLP1P0C6A0 271 aa6.32□□□□□ -1.4
CTNND1-236ENST00000533667 GLRA1P23415 457 aa6.32□□□□□ -1.4
CTNND1-236ENST00000533667 TGFBR1P36897 503 aa6.32□□□□□ -1.4
CTNND1-236ENST00000533667 KCNJ3P48549 501 aa6.32□□□□□ -1.4
CTNND1-236ENST00000533667 DSCR4P56555 118 aaPredicted RBP6.32□□□□□ -1.4
CTNND1-236ENST00000533667 NHLH2Q02577 135 aa6.32□□□□□ -1.4
CTNND1-236ENST00000533667 ZNF90Q03938 601 aa6.32□□□□□ -1.4
CTNND1-236ENST00000533667 KCNAB1Q14722 419 aa6.32□□□□□ -1.4
CTNND1-236ENST00000533667 AGERQ15109 404 aa6.32□□□□□ -1.4
CTNND1-236ENST00000533667 XAF1Q6GPH4 301 aa6.32□□□□□ -1.4
CTNND1-236ENST00000533667 C11orf87Q6NUJ2 197 aa6.32□□□□□ -1.4
CTNND1-236ENST00000533667 SIRT6Q8N6T7 355 aa6.32□□□□□ -1.4
CTNND1-236ENST00000533667 SCCPDHQ8NBX0 429 aa6.32□□□□□ -1.4
CTNND1-236ENST00000533667 BHLHE23Q8NDY6 225 aa6.32□□□□□ -1.4
CTNND1-236ENST00000533667 HGDQ93099 445 aa6.32□□□□□ -1.4
CTNND1-236ENST00000533667 MTCH1Q9NZJ7 389 aa6.32□□□□□ -1.4
CTNND1-236ENST00000533667 PROCRQ9UNN8 238 aa6.32□□□□□ -1.4
CTNND1-236ENST00000533667 FLVCR2Q9UPI3 526 aa6.32□□□□□ -1.4
CTNND1-236ENST00000533667 SIGLEC7Q9Y286 467 aa6.32□□□□□ -1.4
CTNND1-236ENST00000533667 A0A1B0GTL3 188 aa6.32□□□□□ -1.4
CTNND1-236ENST00000533667 ASPDHA6ND91 283 aa6.32□□□□□ -1.4
CTNND1-236ENST00000533667 ANGPTL7O43827 346 aa6.32□□□□□ -1.4
CTNND1-236ENST00000533667 WDR1O75083 606 aa6.32□□□□□ -1.4
CTNND1-236ENST00000533667 CRYAAP02489 173 aa6.32□□□□□ -1.4
CTNND1-236ENST00000533667 HOXC4P09017 264 aaPredicted RBP6.32□□□□□ -1.4
CTNND1-236ENST00000533667 NDUFB7P17568 137 aa6.32□□□□□ -1.4
CTNND1-236ENST00000533667 EPHA2P29317 976 aa6.32□□□□□ -1.4
CTNND1-236ENST00000533667 CCL11P51671 97 aa6.32□□□□□ -1.4
CTNND1-236ENST00000533667 ZNF121P58317 390 aaPredicted RBP6.32□□□□□ -1.4
CTNND1-236ENST00000533667 SNRPEP62304 92 aaKnown RBP6.32□□□□□ -1.4
CTNND1-236ENST00000533667 PPP2CBP62714 309 aa6.32□□□□□ -1.4
CTNND1-236ENST00000533667 PPP2CAP67775 309 aa6.32□□□□□ -1.4
CTNND1-236ENST00000533667 FUT7Q11130 342 aa6.32□□□□□ -1.4
CTNND1-236ENST00000533667 KIAA0040Q15053 153 aa6.32□□□□□ -1.4
CTNND1-236ENST00000533667 ZNF718Q3SXZ3 478 aa6.32□□□□□ -1.4
CTNND1-236ENST00000533667 LINC00303Q3SY05 128 aa6.32□□□□□ -1.4
CTNND1-236ENST00000533667 C9orf152Q5JTZ5 239 aa6.32□□□□□ -1.4
CTNND1-236ENST00000533667 TSEN54Q7Z6J9 526 aaKnown RBP6.32□□□□□ -1.4
CTNND1-236ENST00000533667 OR5M1Q8NGP8 315 aa6.32□□□□□ -1.4
CTNND1-236ENST00000533667 OR1N1Q8NGS0 311 aa6.32□□□□□ -1.4
CTNND1-236ENST00000533667 OR1J1Q8NGS3 322 aa6.32□□□□□ -1.4
CTNND1-236ENST00000533667 OR8U1Q8NH10 309 aa6.32□□□□□ -1.4
CTNND1-236ENST00000533667 OR4F5Q8NH21 305 aa6.32□□□□□ -1.4
CTNND1-236ENST00000533667 PTP4A1Q93096 173 aa6.32□□□□□ -1.4
CTNND1-236ENST00000533667 APOBEC3DQ96AK3 386 aaPredicted RBP6.32□□□□□ -1.4
CTNND1-236ENST00000533667 MYEOVQ96EZ4 313 aa6.32□□□□□ -1.4
CTNND1-236ENST00000533667 OR4F4Q96R69 305 aa6.32□□□□□ -1.4
CTNND1-236ENST00000533667 LTB4R2Q9NPC1 389 aa6.32□□□□□ -1.4
CTNND1-236ENST00000533667 SLC35D1Q9NTN3 355 aa6.32□□□□□ -1.4
CTNND1-236ENST00000533667 MED29Q9NX70 200 aa6.32□□□□□ -1.4
CTNND1-236ENST00000533667 ZNF586Q9NXT0 402 aa6.32□□□□□ -1.4
CTNND1-236ENST00000533667 PSENENQ9NZ42 101 aa6.32□□□□□ -1.4
CTNND1-236ENST00000533667 ST3GAL6Q9Y274 331 aa6.32□□□□□ -1.4
CTNND1-236ENST00000533667 URGCP-MRPS24S4R325 110 aa6.32□□□□□ -1.4
CTNND1-236ENST00000533667 KCNE1BA0A087WTH5 132 aa6.31□□□□□ -1.4
CTNND1-236ENST00000533667 MEIKINA0A087WXM9 373 aa6.31□□□□□ -1.4
CTNND1-236ENST00000533667 SPTY2D1-AS1A0A0U1RR47 76 aa6.31□□□□□ -1.4
CTNND1-236ENST00000533667 C5orf49A4QMS7 147 aa6.31□□□□□ -1.4
CTNND1-236ENST00000533667 LMO7DNF2Z398 122 aa6.31□□□□□ -1.4
CTNND1-236ENST00000533667 GPR31O00270 319 aa6.31□□□□□ -1.4
CTNND1-236ENST00000533667 SDCBPO00560 298 aaPredicted RBP6.31□□□□□ -1.4
CTNND1-236ENST00000533667 NRG2O14511 850 aaPredicted RBP6.31□□□□□ -1.4
CTNND1-236ENST00000533667 RRP8O43159 456 aaKnown RBP6.31□□□□□ -1.4
CTNND1-236ENST00000533667 IL2RAP01589 272 aa6.31□□□□□ -1.4
CTNND1-236ENST00000533667 RRASP10301 218 aa6.31□□□□□ -1.4
CTNND1-236ENST00000533667 NKG7Q16617 165 aa6.31□□□□□ -1.4
CTNND1-236ENST00000533667 SPICQ8N5J4 248 aa6.31□□□□□ -1.4
CTNND1-236ENST00000533667 OR2V1Q8NHB1 315 aa6.31□□□□□ -1.4
CTNND1-236ENST00000533667 SPACA9Q96E40 222 aaPredicted RBP6.31□□□□□ -1.4
CTNND1-236ENST00000533667 TVP23CQ96ET8 276 aa6.31□□□□□ -1.4
CTNND1-236ENST00000533667 DMRT1Q9Y5R6 373 aa6.31□□□□□ -1.4
CTNND1-236ENST00000533667 HNRNPA3P51991 378 aaKnown RBP6.31□□□□□ -1.4
CTNND1-236ENST00000533667 WNT3P56703 355 aa6.31□□□□□ -1.4
CTNND1-236ENST00000533667 HAGHQ16775 308 aa6.31□□□□□ -1.4
CTNND1-236ENST00000533667 SMIM21Q3B7S5 101 aa6.31□□□□□ -1.4
CTNND1-236ENST00000533667 SLC25A35Q3KQZ1 300 aa6.31□□□□□ -1.4
CTNND1-236ENST00000533667 MOGAT2Q3SYC2 334 aa6.31□□□□□ -1.4
CTNND1-236ENST00000533667 OR4S1Q8NGB4 309 aa6.31□□□□□ -1.4
CTNND1-236ENST00000533667 OR13D1Q8NGV5 346 aa6.31□□□□□ -1.4
CTNND1-236ENST00000533667 MEGF10Q96KG7 1140 aa6.31□□□□□ -1.4
CTNND1-236ENST00000533667 CABLES2Q9BTV7 478 aa6.31□□□□□ -1.4
CTNND1-236ENST00000533667 C20orf24Q9BUV8 137 aa6.31□□□□□ -1.4
CTNND1-236ENST00000533667 RAB18Q9NP72 206 aa6.31□□□□□ -1.4
CTNND1-236ENST00000533667 MMP25Q9NPA2 562 aa6.31□□□□□ -1.4
CTNND1-236ENST00000533667 SLC23A1Q9UHI7 598 aa6.31□□□□□ -1.4
CTNND1-236ENST00000533667 LOC390937A0A1W2PQ73 354 aa6.31□□□□□ -1.4
CTNND1-236ENST00000533667 PQLC2LA1A4F0 135 aa6.31□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 53.2 ms