RNA–Protein interactions for RNA: ENST00000531858.1

AC055878.1-201, humanhuman

TSL 3 BASIC

Gene AC055878.1, Length 281 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC055878.1-201ENST00000531858 ZNF488Q96MN9 340 aa3.28□□□□□ -1.88
AC055878.1-201ENST00000531858 C20orf144Q9BQM9 153 aa3.28□□□□□ -1.88
AC055878.1-201ENST00000531858 MRPS26Q9BYN8 205 aaKnown RBP3.28□□□□□ -1.88
AC055878.1-201ENST00000531858 BARHL1Q9BZE3 327 aa3.28□□□□□ -1.88
AC055878.1-201ENST00000531858 MFSD1Q9H3U5 465 aa3.28□□□□□ -1.88
AC055878.1-201ENST00000531858 FBXO8Q9NRD0 319 aa3.28□□□□□ -1.88
AC055878.1-201ENST00000531858 RGS18Q9NS28 235 aa3.28□□□□□ -1.88
AC055878.1-201ENST00000531858 MARCH5Q9NX47 278 aa3.28□□□□□ -1.88
AC055878.1-201ENST00000531858 ABCC11Q96J66 1382 aa3.27□□□□□ -1.89
AC055878.1-201ENST00000531858 GREB1LQ9C091 1923 aaPredicted RBP3.27□□□□□ -1.89
AC055878.1-201ENST00000531858 ISPDA4D126 451 aa3.27□□□□□ -1.89
AC055878.1-201ENST00000531858 TMEM114B3SHH9 223 aa3.27□□□□□ -1.89
AC055878.1-201ENST00000531858 F5H5K5 113 aa3.27□□□□□ -1.89
AC055878.1-201ENST00000531858 H0Y980 276 aa3.27□□□□□ -1.89
AC055878.1-201ENST00000531858 CCRL2O00421 344 aa3.27□□□□□ -1.89
AC055878.1-201ENST00000531858 MYL12BO14950 172 aa3.27□□□□□ -1.89
AC055878.1-201ENST00000531858 ACOX3O15254 700 aa3.27□□□□□ -1.89
AC055878.1-201ENST00000531858 ZNF253O75346 499 aa3.27□□□□□ -1.89
AC055878.1-201ENST00000531858 ASS1P00966 412 aaKnown RBP3.27□□□□□ -1.89
AC055878.1-201ENST00000531858 ISG15P05161 165 aa3.27□□□□□ -1.89
AC055878.1-201ENST00000531858 TDGF1P13385 188 aa3.27□□□□□ -1.89
AC055878.1-201ENST00000531858 RAB3AP20336 220 aa3.27□□□□□ -1.89
AC055878.1-201ENST00000531858 IDH2P48735 452 aaKnown RBP3.27□□□□□ -1.89
AC055878.1-201ENST00000531858 TDGF1P3P51864 188 aa3.27□□□□□ -1.89
AC055878.1-201ENST00000531858 AP2S1P53680 142 aaPredicted RBP3.27□□□□□ -1.89
AC055878.1-201ENST00000531858 FGF8P55075 233 aaPredicted RBP3.27□□□□□ -1.89
AC055878.1-201ENST00000531858 NUP107P57740 925 aa3.27□□□□□ -1.89
AC055878.1-201ENST00000531858 MTPNP58546 118 aa3.27□□□□□ -1.89
AC055878.1-201ENST00000531858 MRPS21P82921 87 aaKnown RBP3.27□□□□□ -1.89
AC055878.1-201ENST00000531858 ZNF45Q02386 682 aa3.27□□□□□ -1.89
AC055878.1-201ENST00000531858 BAXQ07812 192 aa3.27□□□□□ -1.89
AC055878.1-201ENST00000531858 CD300CQ08708 224 aa3.27□□□□□ -1.89
AC055878.1-201ENST00000531858 MLLT11Q13015 90 aaPredicted RBP3.27□□□□□ -1.89
AC055878.1-201ENST00000531858 CASP8Q14790 479 aa3.27□□□□□ -1.89
AC055878.1-201ENST00000531858 TMED2Q15363 201 aa3.27□□□□□ -1.89
AC055878.1-201ENST00000531858 SGCAQ16586 387 aa3.27□□□□□ -1.89
AC055878.1-201ENST00000531858 TBC1D28Q2M2D7 210 aa3.27□□□□□ -1.89
AC055878.1-201ENST00000531858 LRRC10Q5BKY1 277 aa3.27□□□□□ -1.89
AC055878.1-201ENST00000531858 TTMPQ5BVD1 217 aa3.27□□□□□ -1.89
AC055878.1-201ENST00000531858 SYPL2Q5VXT5 272 aa3.27□□□□□ -1.89
AC055878.1-201ENST00000531858 STEAP4Q687X5 459 aa3.27□□□□□ -1.89
AC055878.1-201ENST00000531858 DNM1P34Q6PK57 102 aa3.27□□□□□ -1.89
AC055878.1-201ENST00000531858 HSD17B13Q7Z5P4 300 aaPredicted RBP3.27□□□□□ -1.89
AC055878.1-201ENST00000531858 SLC13A5Q86YT5 568 aaPredicted RBP3.27□□□□□ -1.89
AC055878.1-201ENST00000531858 GAPTQ8N292 157 aa3.27□□□□□ -1.89
AC055878.1-201ENST00000531858 ZNF786Q8N393 782 aa3.27□□□□□ -1.89
AC055878.1-201ENST00000531858 TTLQ8NG68 377 aa3.27□□□□□ -1.89
AC055878.1-201ENST00000531858 OR5D18Q8NGL1 313 aa3.27□□□□□ -1.89
AC055878.1-201ENST00000531858 OR1S1Q8NH92 325 aa3.27□□□□□ -1.89
AC055878.1-201ENST00000531858 OR2AE1Q8NHA4 323 aa3.27□□□□□ -1.89
AC055878.1-201ENST00000531858 PIGXQ8TBF5 258 aa3.27□□□□□ -1.89
AC055878.1-201ENST00000531858 RNF138Q8WVD3 245 aa3.27□□□□□ -1.89
AC055878.1-201ENST00000531858 NELFBQ8WX92 580 aa3.27□□□□□ -1.89
AC055878.1-201ENST00000531858 HGDQ93099 445 aa3.27□□□□□ -1.89
AC055878.1-201ENST00000531858 CREB3L1Q96BA8 519 aa3.27□□□□□ -1.89
AC055878.1-201ENST00000531858 ZMYND19Q96E35 227 aaPredicted RBP3.27□□□□□ -1.89
AC055878.1-201ENST00000531858 RNF185Q96GF1 192 aa3.27□□□□□ -1.89
AC055878.1-201ENST00000531858 RBP7Q96R05 134 aa3.27□□□□□ -1.89
AC055878.1-201ENST00000531858 STACQ99469 402 aa3.27□□□□□ -1.89
AC055878.1-201ENST00000531858 NRIP2Q9BQI9 281 aa3.27□□□□□ -1.89
AC055878.1-201ENST00000531858 LRRC61Q9BV99 259 aa3.27□□□□□ -1.89
AC055878.1-201ENST00000531858 GABARAPL3Q9BY60 117 aa3.27□□□□□ -1.89
AC055878.1-201ENST00000531858 OR11A1Q9GZK7 315 aa3.27□□□□□ -1.89
AC055878.1-201ENST00000531858 ZNF702PQ9H963 129 aa3.27□□□□□ -1.89
AC055878.1-201ENST00000531858 EXOSC4Q9NPD3 245 aaKnown RBP3.27□□□□□ -1.89
AC055878.1-201ENST00000531858 C12orf4Q9NQ89 552 aa3.27□□□□□ -1.89
AC055878.1-201ENST00000531858 DIABLOQ9NR28 239 aa3.27□□□□□ -1.89
AC055878.1-201ENST00000531858 FAM49BQ9NUQ9 324 aa3.27□□□□□ -1.89
AC055878.1-201ENST00000531858 RBM22Q9NW64 420 aaKnown RBP eCLIP3.27□□□□□ -1.89
AC055878.1-201ENST00000531858 DNAJC27Q9NZQ0 273 aa3.27□□□□□ -1.89
AC055878.1-201ENST00000531858 ANXA10Q9UJ72 324 aa3.27□□□□□ -1.89
AC055878.1-201ENST00000531858 SAMHD1Q9Y3Z3 626 aaKnown RBP3.27□□□□□ -1.89
AC055878.1-201ENST00000531858 NEUROG3Q9Y4Z2 214 aa3.27□□□□□ -1.89
AC055878.1-201ENST00000531858 CEMIPQ8WUJ3 1361 aa3.26□□□□□ -1.89
AC055878.1-201ENST00000531858 SMCHD1A6NHR9 2005 aa3.26□□□□□ -1.89
AC055878.1-201ENST00000531858 A0A0G2JN53 185 aa3.26□□□□□ -1.89
AC055878.1-201ENST00000531858 H0Y9J4 135 aa3.26□□□□□ -1.89
AC055878.1-201ENST00000531858 H7C1H1 209 aa3.26□□□□□ -1.89
AC055878.1-201ENST00000531858 MAGEB4O15481 346 aaPredicted RBP3.26□□□□□ -1.89
AC055878.1-201ENST00000531858 FAM189A1O60320 539 aa3.26□□□□□ -1.89
AC055878.1-201ENST00000531858 SLC22A5O76082 557 aa3.26□□□□□ -1.89
AC055878.1-201ENST00000531858 PTTG1O95997 202 aa3.26□□□□□ -1.89
AC055878.1-201ENST00000531858 IGHV3-23P01764 117 aa3.26□□□□□ -1.89
AC055878.1-201ENST00000531858 CDK1P06493 297 aa3.26□□□□□ -1.89
AC055878.1-201ENST00000531858 SLC2A1P11166 492 aa3.26□□□□□ -1.89
AC055878.1-201ENST00000531858 HSD11B1P28845 292 aa3.26□□□□□ -1.89
AC055878.1-201ENST00000531858 P2RX1P51575 399 aa3.26□□□□□ -1.89
AC055878.1-201ENST00000531858 HERVK_113P61574 105 aa3.26□□□□□ -1.89
AC055878.1-201ENST00000531858 GLO1Q04760 184 aa3.26□□□□□ -1.89
AC055878.1-201ENST00000531858 SMARCB1Q12824 385 aa3.26□□□□□ -1.89
AC055878.1-201ENST00000531858 SNCBQ16143 134 aa3.26□□□□□ -1.89
AC055878.1-201ENST00000531858 ACTBL2Q562R1 376 aa3.26□□□□□ -1.89
AC055878.1-201ENST00000531858 FAM173BQ6P4H8 233 aa3.26□□□□□ -1.89
AC055878.1-201ENST00000531858 CCDC54Q8NEL0 328 aa3.26□□□□□ -1.89
AC055878.1-201ENST00000531858 OR8K1Q8NGG5 319 aa3.26□□□□□ -1.89
AC055878.1-201ENST00000531858 STOML3Q8TAV4 291 aa3.26□□□□□ -1.89
AC055878.1-201ENST00000531858 NTAN1Q96AB6 310 aa3.26□□□□□ -1.89
AC055878.1-201ENST00000531858 DDIT4LQ96D03 193 aa3.26□□□□□ -1.89
AC055878.1-201ENST00000531858 MRAP2Q96G30 205 aa3.26□□□□□ -1.89
AC055878.1-201ENST00000531858 KCTD7Q96MP8 289 aa3.26□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms