RNA–Protein interactions for RNA: ENST00000531041.1

SF3B2-211, Transcript of splicing factor 3b subunit 2, humanhuman

TSL 1 (best)

Gene SF3B2, Length 1,440 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B2-211ENST00000531041 ANKRD30BLA7E2S9 258 aa14.41□□□□□ -0.1
SF3B2-211ENST00000531041 CST4P01036 141 aa14.41□□□□□ -0.1
SF3B2-211ENST00000531041 HSMCR30P0CW71 290 aa14.41□□□□□ -0.1
SF3B2-211ENST00000531041 PAX1P15863 534 aa14.41□□□□□ -0.1
SF3B2-211ENST00000531041 DNASE1P24855 282 aa14.41□□□□□ -0.1
SF3B2-211ENST00000531041 CDKN1AP38936 164 aa14.41□□□□□ -0.1
SF3B2-211ENST00000531041 TPBGQ13641 420 aa14.41□□□□□ -0.1
SF3B2-211ENST00000531041 OR51A4Q8NGJ6 313 aa14.41□□□□□ -0.1
SF3B2-211ENST00000531041 GTF3AQ92664 365 aaKnown RBP14.41□□□□□ -0.1
SF3B2-211ENST00000531041 VRK1Q99986 396 aaPredicted RBP14.41□□□□□ -0.1
SF3B2-211ENST00000531041 PIGLQ9Y2B2 252 aa14.41□□□□□ -0.1
SF3B2-211ENST00000531041 NOP16Q9Y3C1 178 aaKnown RBP14.41□□□□□ -0.1
SF3B2-211ENST00000531041 RHBDD3Q9Y3P4 386 aa14.41□□□□□ -0.1
SF3B2-211ENST00000531041 PNMA8CA0A1B0GUJ8 204 aa14.41□□□□□ -0.1
SF3B2-211ENST00000531041 H3BSH0 61 aa14.41□□□□□ -0.1
SF3B2-211ENST00000531041 MLNRO43193 412 aa14.41□□□□□ -0.1
SF3B2-211ENST00000531041 GMDSO60547 372 aa14.41□□□□□ -0.1
SF3B2-211ENST00000531041 IGHV1-46P01743 117 aa14.41□□□□□ -0.1
SF3B2-211ENST00000531041 CPEP16870 476 aa14.41□□□□□ -0.1
SF3B2-211ENST00000531041 FAHP16930 419 aa14.41□□□□□ -0.1
SF3B2-211ENST00000531041 CA6P23280 308 aa14.41□□□□□ -0.1
SF3B2-211ENST00000531041 PCGF3Q3KNV8 242 aa14.41□□□□□ -0.1
SF3B2-211ENST00000531041 YIF1BQ5BJH7 314 aa14.41□□□□□ -0.1
SF3B2-211ENST00000531041 FAM209AQ5JX71 171 aa14.41□□□□□ -0.1
SF3B2-211ENST00000531041 GPR148Q8TDV2 347 aa14.41□□□□□ -0.1
SF3B2-211ENST00000531041 RGP1Q92546 391 aaPredicted RBP14.41□□□□□ -0.1
SF3B2-211ENST00000531041 UFD1Q92890 307 aa14.41□□□□□ -0.1
SF3B2-211ENST00000531041 MBD6Q96DN6 1003 aa14.41□□□□□ -0.1
SF3B2-211ENST00000531041 OPALINQ96PE5 141 aa14.41□□□□□ -0.1
SF3B2-211ENST00000531041 RAB1BQ9H0U4 201 aa14.41□□□□□ -0.1
SF3B2-211ENST00000531041 PLEKHA1Q9HB21 404 aa14.41□□□□□ -0.1
SF3B2-211ENST00000531041 ZNF275Q9NSD4 429 aaPredicted RBP14.41□□□□□ -0.1
SF3B2-211ENST00000531041 ENPP5Q9UJA9 477 aa14.41□□□□□ -0.1
SF3B2-211ENST00000531041 MPC1Q9Y5U8 109 aa14.41□□□□□ -0.1
SF3B2-211ENST00000531041 SPRY3O43610 288 aa14.4□□□□□ -0.1
SF3B2-211ENST00000531041 LMX1BO60663 402 aa14.4□□□□□ -0.1
SF3B2-211ENST00000531041 ERCC1P07992 297 aaPredicted RBP14.4□□□□□ -0.1
SF3B2-211ENST00000531041 CD55P08174 381 aa14.4□□□□□ -0.1
SF3B2-211ENST00000531041 RPS11P62280 158 aaKnown RBP eCLIP14.4□□□□□ -0.1
SF3B2-211ENST00000531041 LIPKQ5VXJ0 399 aa14.4□□□□□ -0.1
SF3B2-211ENST00000531041 TMEM42Q69YG0 159 aa14.4□□□□□ -0.1
SF3B2-211ENST00000531041 KCTD8Q6ZWB6 473 aa14.4□□□□□ -0.1
SF3B2-211ENST00000531041 OR2Z1Q8NG97 314 aa14.4□□□□□ -0.1
SF3B2-211ENST00000531041 OR13C3Q8NGS6 347 aa14.4□□□□□ -0.1
SF3B2-211ENST00000531041 ELMOD3Q96FG2 381 aa14.4□□□□□ -0.1
SF3B2-211ENST00000531041 TRMT61AQ96FX7 289 aaKnown RBP14.4□□□□□ -0.1
SF3B2-211ENST00000531041 SORCS2Q96PQ0 1159 aa14.4□□□□□ -0.1
SF3B2-211ENST00000531041 PAPOLGQ9BWT3 736 aaKnown RBP14.4□□□□□ -0.1
SF3B2-211ENST00000531041 TPK1Q9H3S4 243 aa14.4□□□□□ -0.1
SF3B2-211ENST00000531041 ABCB9Q9NP78 766 aa14.4□□□□□ -0.1
SF3B2-211ENST00000531041 BEX4Q9NWD9 120 aaPredicted RBP14.4□□□□□ -0.1
SF3B2-211ENST00000531041 H0YL77 283 aa14.39□□□□□ -0.11
SF3B2-211ENST00000531041 HLA-DPB1P04440 258 aa14.39□□□□□ -0.11
SF3B2-211ENST00000531041 TNFSF4P23510 183 aa14.39□□□□□ -0.11
SF3B2-211ENST00000531041 GNALP38405 381 aa14.39□□□□□ -0.11
SF3B2-211ENST00000531041 PRDX4Q13162 271 aa14.39□□□□□ -0.11
SF3B2-211ENST00000531041 OR8G1Q15617 311 aa14.39□□□□□ -0.11
SF3B2-211ENST00000531041 ARMCX4Q5H9R4 360 aa14.39□□□□□ -0.11
SF3B2-211ENST00000531041 CDH24Q86UP0 819 aa14.39□□□□□ -0.11
SF3B2-211ENST00000531041 MS4A15Q8N5U1 240 aa14.39□□□□□ -0.11
SF3B2-211ENST00000531041 SPERTQ8NA61 448 aa14.39□□□□□ -0.11
SF3B2-211ENST00000531041 OR10AD1Q8NGE0 317 aa14.39□□□□□ -0.11
SF3B2-211ENST00000531041 UBASH3BQ8TF42 649 aa14.39□□□□□ -0.11
SF3B2-211ENST00000531041 NEU4Q8WWR8 484 aaPredicted RBP14.39□□□□□ -0.11
SF3B2-211ENST00000531041 PIGCQ92535 297 aa14.39□□□□□ -0.11
SF3B2-211ENST00000531041 FGGYQ96C11 551 aa14.39□□□□□ -0.11
SF3B2-211ENST00000531041 ADAT3Q96EY9 351 aaPredicted RBP14.39□□□□□ -0.11
SF3B2-211ENST00000531041 ADAT1Q9BUB4 502 aaKnown RBP14.39□□□□□ -0.11
SF3B2-211ENST00000531041 GSX2Q9BZM3 304 aa14.39□□□□□ -0.11
SF3B2-211ENST00000531041 IL19Q9UHD0 177 aa14.39□□□□□ -0.11
SF3B2-211ENST00000531041 CSMD2Q7Z408 3487 aa14.38□□□□□ -0.11
SF3B2-211ENST00000531041 TRBV5-5A0A0J9YX44 114 aa14.38□□□□□ -0.11
SF3B2-211ENST00000531041 MAGEA13PA6NCF6 341 aa14.38□□□□□ -0.11
SF3B2-211ENST00000531041 A6NIN4 97 aa14.38□□□□□ -0.11
SF3B2-211ENST00000531041 ZNF850A8MQ14 1090 aa14.38□□□□□ -0.11
SF3B2-211ENST00000531041 INMTO95050 263 aa14.38□□□□□ -0.11
SF3B2-211ENST00000531041 MAGEB1P43366 347 aa14.38□□□□□ -0.11
SF3B2-211ENST00000531041 CCL8P80075 99 aa14.38□□□□□ -0.11
SF3B2-211ENST00000531041 TSTQ16762 297 aaKnown RBP14.38□□□□□ -0.11
SF3B2-211ENST00000531041 DEFB113Q30KQ7 82 aa14.38□□□□□ -0.11
SF3B2-211ENST00000531041 CLVS2Q5SYC1 327 aa14.38□□□□□ -0.11
SF3B2-211ENST00000531041 SYT6Q5T7P8 510 aaPredicted RBP14.38□□□□□ -0.11
SF3B2-211ENST00000531041 PHC2Q8IXK0 858 aa14.38□□□□□ -0.11
SF3B2-211ENST00000531041 TSEN15Q8WW01 171 aaKnown RBP14.38□□□□□ -0.11
SF3B2-211ENST00000531041 PP6455Q8WZ26 134 aa14.38□□□□□ -0.11
SF3B2-211ENST00000531041 PPP1R3EQ9H7J1 279 aa14.38□□□□□ -0.11
SF3B2-211ENST00000531041 VCX3AQ9NNX9 186 aa14.38□□□□□ -0.11
SF3B2-211ENST00000531041 DHDHQ9UQ10 334 aa14.38□□□□□ -0.11
SF3B2-211ENST00000531041 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP14.37□□□□□ -0.11
SF3B2-211ENST00000531041 ANXA2P2A6NMY6 339 aa14.37□□□□□ -0.11
SF3B2-211ENST00000531041 NDUFS7O75251 213 aa14.37□□□□□ -0.11
SF3B2-211ENST00000531041 F12P00748 615 aaPredicted RBP14.37□□□□□ -0.11
SF3B2-211ENST00000531041 NRASP01111 189 aa14.37□□□□□ -0.11
SF3B2-211ENST00000531041 OCM2P0CE71 109 aa14.37□□□□□ -0.11
SF3B2-211ENST00000531041 PSMB9P28065 219 aa14.37□□□□□ -0.11
SF3B2-211ENST00000531041 PTH2RP49190 550 aa14.37□□□□□ -0.11
SF3B2-211ENST00000531041 EFNA4P52798 201 aa14.37□□□□□ -0.11
SF3B2-211ENST00000531041 TNFAIP6P98066 277 aaPredicted RBP14.37□□□□□ -0.11
SF3B2-211ENST00000531041 TRAM1Q15629 374 aa14.37□□□□□ -0.11
SF3B2-211ENST00000531041 NEDD8Q15843 81 aa14.37□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 59.7 ms