RNA–Protein interactions for RNA: ENST00000530906.1

PCF11-205, Transcript of PCF11, cleavage and polyadenylation factor subunit, humanhuman

TSL 3

Gene PCF11, Length 628 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCF11-205ENST00000530906 ZNF416Q9BWM5 594 aa4.88□□□□□ -1.63
PCF11-205ENST00000530906 CHST5Q9GZS9 411 aa4.88□□□□□ -1.63
PCF11-205ENST00000530906 GP6Q9HCN6 339 aa4.88□□□□□ -1.63
PCF11-205ENST00000530906 DLL4Q9NR61 685 aa4.88□□□□□ -1.63
PCF11-205ENST00000530906 PCDHB16Q9NRJ7 776 aa4.88□□□□□ -1.63
PCF11-205ENST00000530906 ZNF222Q9UK12 451 aa4.88□□□□□ -1.63
PCF11-205ENST00000530906 ANAPC10Q9UM13 185 aa4.88□□□□□ -1.63
PCF11-205ENST00000530906 MRPS28Q9Y2Q9 187 aaKnown RBP4.88□□□□□ -1.63
PCF11-205ENST00000530906 KLF13Q9Y2Y9 288 aaPredicted RBP4.88□□□□□ -1.63
PCF11-205ENST00000530906 MRPS18BQ9Y676 258 aaKnown RBP4.88□□□□□ -1.63
PCF11-205ENST00000530906 V9GYS6 101 aa4.88□□□□□ -1.63
PCF11-205ENST00000530906 ALPK2Q86TB3 2170 aa4.88□□□□□ -1.63
PCF11-205ENST00000530906 UNC80Q8N2C7 3258 aa4.87□□□□□ -1.63
PCF11-205ENST00000530906 OR6C6A6NF89 314 aa4.87□□□□□ -1.63
PCF11-205ENST00000530906 TUBAL3A6NHL2 446 aa4.87□□□□□ -1.63
PCF11-205ENST00000530906 ZNF716A6NP11 495 aa4.87□□□□□ -1.63
PCF11-205ENST00000530906 ZNF724A8MTY0 619 aa4.87□□□□□ -1.63
PCF11-205ENST00000530906 SERPINE3A8MV23 424 aa4.87□□□□□ -1.63
PCF11-205ENST00000530906 A8MV72 311 aaPredicted RBP4.87□□□□□ -1.63
PCF11-205ENST00000530906 PRSS44E7EML9 344 aa4.87□□□□□ -1.63
PCF11-205ENST00000530906 H3BUI4 141 aa4.87□□□□□ -1.63
PCF11-205ENST00000530906 RPL36A-HNRNPH2H7BZ11 118 aa4.87□□□□□ -1.63
PCF11-205ENST00000530906 M0R135 149 aa4.87□□□□□ -1.63
PCF11-205ENST00000530906 RAB27BO00194 218 aa4.87□□□□□ -1.63
PCF11-205ENST00000530906 CDX4O14627 284 aaPredicted RBP4.87□□□□□ -1.63
PCF11-205ENST00000530906 TNFSF11O14788 317 aa4.87□□□□□ -1.63
PCF11-205ENST00000530906 RER1O15258 196 aa4.87□□□□□ -1.63
PCF11-205ENST00000530906 XRCC2O43543 280 aa4.87□□□□□ -1.63
PCF11-205ENST00000530906 SGCEO43556 437 aa4.87□□□□□ -1.63
PCF11-205ENST00000530906 RAD1O60671 282 aa4.87□□□□□ -1.63
PCF11-205ENST00000530906 RAMP1O60894 148 aa4.87□□□□□ -1.63
PCF11-205ENST00000530906 ZNF780AO75290 641 aaPredicted RBP4.87□□□□□ -1.63
PCF11-205ENST00000530906 KDM4BO94953 1096 aa4.87□□□□□ -1.63
PCF11-205ENST00000530906 SYNGR4O95473 234 aa4.87□□□□□ -1.63
PCF11-205ENST00000530906 ACTL6AO96019 429 aa4.87□□□□□ -1.63
PCF11-205ENST00000530906 IFNA7P01567 189 aa4.87□□□□□ -1.63
PCF11-205ENST00000530906 TPOP07202 933 aa4.87□□□□□ -1.63
PCF11-205ENST00000530906 TMIGD3P0DMS9 266 aaPredicted RBP4.87□□□□□ -1.63
PCF11-205ENST00000530906 COX5BP10606 129 aa4.87□□□□□ -1.63
PCF11-205ENST00000530906 NAT2P11245 290 aa4.87□□□□□ -1.63
PCF11-205ENST00000530906 NAT1P18440 290 aa4.87□□□□□ -1.63
PCF11-205ENST00000530906 SDHBP21912 280 aa4.87□□□□□ -1.63
PCF11-205ENST00000530906 PRKACBP22694 351 aa4.87□□□□□ -1.63
PCF11-205ENST00000530906 CRYGSP22914 178 aa4.87□□□□□ -1.63
PCF11-205ENST00000530906 DNASE1P24855 282 aa4.87□□□□□ -1.63
PCF11-205ENST00000530906 GDF1P27539 372 aa4.87□□□□□ -1.63
PCF11-205ENST00000530906 AVPR2P30518 371 aa4.87□□□□□ -1.63
PCF11-205ENST00000530906 DLSTP36957 453 aa4.87□□□□□ -1.63
PCF11-205ENST00000530906 ECI1P42126 302 aa4.87□□□□□ -1.63
PCF11-205ENST00000530906 PRKXP51817 358 aa4.87□□□□□ -1.63
PCF11-205ENST00000530906 EFNB2P52799 333 aa4.87□□□□□ -1.63
PCF11-205ENST00000530906 RRADP55042 308 aa4.87□□□□□ -1.63
PCF11-205ENST00000530906 SOX8P57073 446 aa4.87□□□□□ -1.63
PCF11-205ENST00000530906 TAS2R31P59538 309 aa4.87□□□□□ -1.63
PCF11-205ENST00000530906 ERVFRD-1P60508 538 aa4.87□□□□□ -1.63
PCF11-205ENST00000530906 GMFBP60983 142 aa4.87□□□□□ -1.63
PCF11-205ENST00000530906 OC90Q02509 493 aaPredicted RBP4.87□□□□□ -1.63
PCF11-205ENST00000530906 FGL1Q08830 312 aa4.87□□□□□ -1.63
PCF11-205ENST00000530906 FOXO1Q12778 655 aa4.87□□□□□ -1.63
PCF11-205ENST00000530906 MFAP5Q13361 173 aa4.87□□□□□ -1.63
PCF11-205ENST00000530906 RNPS1Q15287 305 aaKnown RBP4.87□□□□□ -1.63
PCF11-205ENST00000530906 CNN3Q15417 329 aaKnown RBP4.87□□□□□ -1.63
PCF11-205ENST00000530906 SF3B4Q15427 424 aaKnown RBP eCLIP4.87□□□□□ -1.63
PCF11-205ENST00000530906 GFOD2Q3B7J2 385 aa4.87□□□□□ -1.63
PCF11-205ENST00000530906 KRTAP27-1Q3LI81 207 aa4.87□□□□□ -1.63
PCF11-205ENST00000530906 ZNF260Q3ZCT1 412 aa4.87□□□□□ -1.63
PCF11-205ENST00000530906 DCAF10Q5QP82 559 aa4.87□□□□□ -1.63
PCF11-205ENST00000530906 VAX1Q5SQQ9 334 aa4.87□□□□□ -1.63
PCF11-205ENST00000530906 CARD17Q5XLA6 110 aa4.87□□□□□ -1.63
PCF11-205ENST00000530906 NSUN5P2Q63ZY6 315 aa4.87□□□□□ -1.63
PCF11-205ENST00000530906 AWAT2Q6E213 333 aa4.87□□□□□ -1.63
PCF11-205ENST00000530906 SFRP4Q6FHJ7 346 aaPredicted RBP4.87□□□□□ -1.63
PCF11-205ENST00000530906 TCEAL6Q6IPX3 200 aa4.87□□□□□ -1.63
PCF11-205ENST00000530906 Q6ZTK2 550 aa4.87□□□□□ -1.63
PCF11-205ENST00000530906 FAM57BQ71RH2 274 aa4.87□□□□□ -1.63
PCF11-205ENST00000530906 AAED1Q7RTV5 226 aa4.87□□□□□ -1.63
PCF11-205ENST00000530906 SLC16A14Q7RTX9 510 aa4.87□□□□□ -1.63
PCF11-205ENST00000530906 SLC36A1Q7Z2H8 476 aa4.87□□□□□ -1.63
PCF11-205ENST00000530906 NAA40Q86UY6 237 aa4.87□□□□□ -1.63
PCF11-205ENST00000530906 COMMD2Q86X83 199 aa4.87□□□□□ -1.63
PCF11-205ENST00000530906 WDFY1Q8IWB7 410 aa4.87□□□□□ -1.63
PCF11-205ENST00000530906 OR5AS1Q8N127 324 aa4.87□□□□□ -1.63
PCF11-205ENST00000530906 C9orf62Q8N4C0 152 aa4.87□□□□□ -1.63
PCF11-205ENST00000530906 FAM89BQ8N5H3 189 aa4.87□□□□□ -1.63
PCF11-205ENST00000530906 ARRDC1Q8N5I2 433 aa4.87□□□□□ -1.63
PCF11-205ENST00000530906 DTX3Q8N9I9 347 aa4.87□□□□□ -1.63
PCF11-205ENST00000530906 OR2M7Q8NG81 312 aa4.87□□□□□ -1.63
PCF11-205ENST00000530906 OR52N4Q8NGI2 321 aa4.87□□□□□ -1.63
PCF11-205ENST00000530906 OR4D6Q8NGJ1 314 aa4.87□□□□□ -1.63
PCF11-205ENST00000530906 OR5M1Q8NGP8 315 aa4.87□□□□□ -1.63
PCF11-205ENST00000530906 OR13C9Q8NGT0 318 aa4.87□□□□□ -1.63
PCF11-205ENST00000530906 OR2T35Q8NGX2 323 aa4.87□□□□□ -1.63
PCF11-205ENST00000530906 OR10R2Q8NGX6 335 aa4.87□□□□□ -1.63
PCF11-205ENST00000530906 OR14K1Q8NGZ2 314 aa4.87□□□□□ -1.63
PCF11-205ENST00000530906 OR10D3Q8NH80 312 aa4.87□□□□□ -1.63
PCF11-205ENST00000530906 ADAMTS17Q8TE56 1095 aa4.87□□□□□ -1.63
PCF11-205ENST00000530906 TCEAL3Q969E4 200 aa4.87□□□□□ -1.63
PCF11-205ENST00000530906 PPP1R14AQ96A00 147 aa4.87□□□□□ -1.63
PCF11-205ENST00000530906 MRPS24Q96EL2 167 aaKnown RBP4.87□□□□□ -1.63
PCF11-205ENST00000530906 ZNF799Q96GE5 643 aa4.87□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms